Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11310 108 / 5e-29 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT2G39200 107 / 6e-28 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G61560 103 / 2e-26 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT5G65970 84 / 1e-19 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT2G17480 82 / 6e-19 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT2G17430 81 / 2e-18 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT2G44110 74 / 3e-16 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT4G24250 72 / 1e-15 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) AT1G42560 71 / 4e-15 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT3G45290 69 / 2e-14 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036120 [exp] 192 / 1e-59 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10040388 [exp] 100 / 2e-25 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10023506 [exp] 99 / 7e-25 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10036121 [exp] 96 / 5e-24 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10012241 [exp] 94 / 3e-23 AT3G45290 336 / 2e-110 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10016035 [exp] 92 / 2e-22 AT1G11310 317 / 7e-100 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Lus10036519 [exp] 90 / 9e-22 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10041410 [exp] 87 / 9e-21 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10019630 [exp] 83 / 3e-19 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G011900 [exp] 142 / 1e-40 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.016G088000 [exp] 114 / 7e-31 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.010G220500 [exp] 115 / 8e-31 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.008G041400 [exp] 103 / 1e-26 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.005G099200 [exp] 90 / 7e-22 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.007G064200 [exp] 90 / 9e-22 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 87 / 7e-21 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.013G069900 [exp] 87 / 9e-21 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.011G058900 [exp] 86 / 1e-20 AT1G61560 445 / 2e-151 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.002G006700 [exp] 84 / 8e-20 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10011630 pacid=23172911 polypeptide=Lus10011630 locus=Lus10011630.g ID=Lus10011630.BGIv1.0 annot-version=v1.0 ATGGCCGGAGCGAGTGGCGGAAGATCTCTGGAGCAAACGCCGACATGGGCCGTTGCCGCTTTTTGCTTTTGGTTAAAGAAGAAACACAAGCGAGCTCTGT ACCAAGCACATGAGAAAGTTGAAGCAGAGCTGATGCTGCTGGGATTCATATCGTTGCTTCTAACGGTGGGACAGGATCCGATTTCCAGAATATGTATATC GAAGAAACTGGGATCCACGTGGCATCCTTGTGGCAAGACACCAACGCATACTGATGAGACTGACATGGAGGGAGATAGCCGCCGGCGACTCTTGGTAACA GCTGCTGCTTATTTTTCATCATCTTCTGGTACAAATAGCACCAATCTCAGACGTGTTCTAGCTGGAGCGACAGAAGACAAATGTGCAGCAAAGGTACGCT AA
AA sequence Show only first row Show all	>Lus10011630 pacid=23172911 polypeptide=Lus10011630 locus=Lus10011630.g ID=Lus10011630.BGIv1.0 annot-version=v1.0 MAGASGGRSLEQTPTWAVAAFCFWLKKKHKRALYQAHEKVEAELMLLGFISLLLTVGQDPISRICISKKLGSTWHPCGKTPTHTDETDMEGDSRRRLLVT AAAYFSSSSGTNSTNLRRVLAGATEDKCAAKVR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G11310		PMR2, ATMLO2, M...	POWDERY MILDEW RESISTANT 2, MI...		Lus10011630 [exp]	0	1
AT1G16390		3-Oct, ATOCT3	organic cation/carnitine trans...		Lus10005825 [exp]	8.5	0.9309
AT4G17900			PLATZ transcription factor fam...		Lus10004577 [exp]	10.0	0.9367
AT4G39150			DNAJ heat shock N-terminal dom...		Lus10017980 [exp]	10.2	0.9330
AT1G21390		EMB2170	embryo defective 2170 (.1)		Lus10019210 [exp]	10.2	0.9163
AT1G09490			NAD(P)-binding Rossmann-fold s...		Lus10026153 [exp]	10.6	0.9065
AT1G12110		CHL1-1, CHL1, B...	CHLORINA 1, ARABIDOPSIS THALIA...		Lus10032252 [exp]	11.7	0.9341
AT2G46600			Calcium-binding EF-hand family...		Lus10005985 [exp]	12.2	0.9303
AT4G31830			unknown protein		Lus10010682 [exp]	12.4	0.9245
AT2G46600			Calcium-binding EF-hand family...		Lus10030227 [exp]	13.4	0.9286
AT1G18530			EF hand calcium-binding protei...		Lus10039961 [exp]	15.0	0.8584

Compare expression of checked genes

Lus10011630 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.