Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G45290 72 / 1e-14 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT1G61560 69 / 2e-13 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G39200 66 / 2e-12 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G11310 64 / 7e-12 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT1G42560 62 / 3e-11 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT2G17430 62 / 5e-11 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT5G65970 60 / 2e-10 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT2G33670 59 / 3e-10 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT5G53760 58 / 9e-10 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT2G44110 57 / 1e-09 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036121 [exp] 211 / 2e-65 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10039420 [exp] 77 / 2e-18 ND / Lus10036120 [exp] 68 / 5e-13 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10041410 [exp] 66 / 4e-12 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 65 / 4e-12 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10022096 [exp] 65 / 6e-12 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 64 / 8e-12 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10040388 [exp] 63 / 2e-11 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10016035 [exp] 59 / 8e-10 AT1G11310 317 / 7e-100 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G002500 [exp] 79 / 7e-17 AT3G45290 551 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Potri.006G129700 [exp] 79 / 9e-17 AT3G45290 505 / 1e-175 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Potri.009G011900 [exp] 70 / 7e-14 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.016G088000 [exp] 67 / 1e-12 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 66 / 2e-12 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 66 / 3e-12 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.005G099200 [exp] 66 / 3e-12 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.005G254300 [exp] 64 / 7e-12 AT1G11310 461 / 3e-157 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.010G220500 [exp] 64 / 1e-11 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.002G007000 [exp] 63 / 2e-11 AT1G11310 448 / 7e-152 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10011632 pacid=23172908 polypeptide=Lus10011632 locus=Lus10011632.g ID=Lus10011632.BGIv1.0 annot-version=v1.0 ATGAGCGATGTAGGAAATGATGAGGACGCGACTGTGCAATGGGAAAGTGATGATGGCGAAGAAGAAGAGATGGATCATGCTGATCATCATCAGGCTGGTC ATCGCCCGAGCTCTTCGAATCATCTCGGATGTCATCGATGTTCGTGGCAATTCGGCATCAAATCCTGCTACCACGAGACCTCCTCGTCACTAGAATGGGT GATGGTGCAAATCTTATGCAGCTACAGAACTCTGCCTCTATACGCTTTAGTAACTCAGATGGGATCGAGGTACAAAGGGGTAATGGTAAAGGAGGAAACC GCAAATGTACTAAAACAATTGCACGCTGGAGTGAAGCAAACCAATAAGAAGAAGCACAACAACAAGGGCGTAGGAGAGCACGACGCCTCATCACATTCTC CTCGCTCTTTGCCTTCTTCGCCCCTTAGCATTACTCGCTTTGCAGAAACTTCATTCCAGCCTCCATTATCCCCGCTGTCCGCCAACCGCACCATGATTGG AATGGGCCACCCGCCCCAAAGTTCGGCGGACACCCACAACTACTTAACATCGGTATTTGACCAACAGCTTAACATAGATACAGTTCCGTACTACTCCAGC GAGATTCACGTTGAAGAAACAACCCAGGAGATTCAGATAGCCAAACTGGATATAATCATATAA
AA sequence Show only first row Show all	>Lus10011632 pacid=23172908 polypeptide=Lus10011632 locus=Lus10011632.g ID=Lus10011632.BGIv1.0 annot-version=v1.0 MSDVGNDEDATVQWESDDGEEEEMDHADHHQAGHRPSSSNHLGCHRCSWQFGIKSCYHETSSSLEWVMVQILCSYRTLPLYALVTQMGSRYKGVMVKEET ANVLKQLHAGVKQTNKKKHNNKGVGEHDASSHSPRSLPSSPLSITRFAETSFQPPLSPLSANRTMIGMGHPPQSSADTHNYLTSVFDQQLNIDTVPYYSS EIHVEETTQEIQIAKLDIII

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G45290		ATMLO3, MLO3	MILDEW RESISTANCE LOCUS O 3, S...		Lus10011632 [exp]	0	1
AT1G61370			S-locus lectin protein kinase ...		Lus10034711 [exp]	8.7	0.6613
					Lus10011453 [exp]	14.8	0.6885
AT2G34160			Alba DNA/RNA-binding protein (...		Lus10021222 [exp]	34.9	0.6514
AT5G51980	C3HZnF		Transducin/WD40 repeat-like su...		Lus10010819 [exp]	43.2	0.6213
AT2G43040		NPG1	no pollen germination 1, tetra...		Lus10033595 [exp]	47.6	0.5994
AT2G45750			S-adenosyl-L-methionine-depend...		Lus10027432 [exp]	54.3	0.5702
					Lus10043138 [exp]	60.8	0.5940
AT2G39300			unknown protein		Lus10014034 [exp]	80.7	0.5852
AT5G07810			SNF2 domain-containing protein...		Lus10015736 [exp]	81.5	0.5884
					Lus10017461 [exp]	83.0	0.5821

Compare expression of checked genes

Lus10011632 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.