Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G25737 573 / 0 Sulfite exporter TauE/SafE family protein (.1) AT2G36630 358 / 1e-119 Sulfite exporter TauE/SafE family protein (.1) AT1G11540 144 / 7e-39 Sulfite exporter TauE/SafE family protein (.1) AT1G61740 131 / 2e-33 Sulfite exporter TauE/SafE family protein (.1) AT4G21250 122 / 4e-30 Sulfite exporter TauE/SafE family protein (.1) AT4G21260 100 / 5e-23 Sulfite exporter TauE/SafE family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014316 [exp] 502 / 1e-175 AT2G25737 536 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10026025 [exp] 500 / 1e-174 AT2G25737 533 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10011683 [exp] 381 / 9e-129 AT2G25737 444 / 9e-154 Sulfite exporter TauE/SafE family protein (.1) Lus10020733 [exp] 353 / 1e-117 AT2G36630 611 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10029813 [exp] 347 / 2e-115 AT2G36630 612 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10022134 [exp] 147 / 2e-41 AT2G25737 168 / 8e-50 Sulfite exporter TauE/SafE family protein (.1) Lus10020068 [exp] 121 / 6e-30 AT1G61740 371 / 2e-125 Sulfite exporter TauE/SafE family protein (.1) Lus10022133 [exp] 80 / 4e-18 AT2G25737 106 / 2e-28 Sulfite exporter TauE/SafE family protein (.1) Lus10006751 [exp] 49 / 6e-06 AT4G05180 271 / 7e-89 photosystem II subunit Q-2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G242100 [exp] 603 / 0 AT2G25737 568 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037400 [exp] 593 / 0 AT2G25737 535 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037500 [exp] 538 / 0 AT2G25737 529 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.003G053000 [exp] 528 / 0 AT2G25737 501 / 2e-175 Sulfite exporter TauE/SafE family protein (.1) Potri.007G026800 [exp] 512 / 5e-180 AT2G25737 434 / 2e-149 Sulfite exporter TauE/SafE family protein (.1) Potri.005G124200 [exp] 504 / 9e-177 AT2G25737 453 / 1e-156 Sulfite exporter TauE/SafE family protein (.1) Potri.001G182700 [exp] 466 / 1e-161 AT2G25737 428 / 6e-147 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183300 [exp] 445 / 1e-153 AT2G25737 381 / 2e-128 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183400 [exp] 445 / 1e-153 AT2G25737 418 / 5e-143 Sulfite exporter TauE/SafE family protein (.1) Potri.006G117900 [exp] 360 / 2e-120 AT2G36630 578 / 0.0 Sulfite exporter TauE/SafE family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0292 [flax] [poplar] LysE PF01925 [flax] [poplar] TauE Sulfite exporter TauE/SafE
Representative CDS sequence Show only first row Show all	>Lus10011682 pacid=23156329 polypeptide=Lus10011682 locus=Lus10011682.g ID=Lus10011682.BGIv1.0 annot-version=v1.0 ATGGCGGAGCTCGGTGCACTGCGGCGGCGGCTGATTCTTCGGCCGATCTCGATGGTTCTATTAAATTTGTTTTTCGGTTTTGGGTTAGTGTTGGCGGACA GACGACTACGATTCCAGGAAACGCAGGAGCTTCTTCCCTCTGGTTTTCTCGCTAAAGCTAAGAATTTCTTGTGGCAGTCCGATCAGGCTGGTGGTTATCA GCACGTTTGGCCGGAGCTTGAATTTGGATGGAAAATAGTAGTGGGTAGTATTGTTGGATTCTTGGGAGCAGCATTTGGGAGTGTCGGTGGCGTTGGTGGG GGCGGCATTTTTGTTCCCATGCTTAGTCTAATTGTTGGGTTTGATGCTAAATCCTCTACTGCAATCTCTAAATGTATGATAATGGGTGCAGCTGCATCAA CTGTGTACTATAATCTTAGGCTACGCCATCCTACGTTAGACATGCCCATCATTGACTACGATTTGGCTCTACTCATCCAGCCTATGCTTATGCTTGGAAT TAGTATTGGTGTGGCTTTTAATGTCATCTTCGCTGACTGGATGGTCACTGTCCTGCTCATTGTTCTGTTCGTAGGCACATCAACAAAGGCATTCTTCAAA GGCGTTGAAACATGGAAAAAGGAGACAATGATGAAAAACGAAGCTGCAAGACGTCTTGAGTCAAGCAATACTGGTGGCGGAGATACCGGTTACAGGCCTC TTCCCAGTGGCCCTCCAAAGAACACCAATGCAGCAGAGGTTACAATTGCAGAGAACGTTTGTTGGAAGGAACTTGGACTTCTTGTATTTGTTTGGGTCTC ATTCCTCATTTTGCAGATTGCAAAGAATTCTATGGATGCTTGCTCTGTAAACTATTGGGTATTGAACTTGTTACAGATCCCTGTGTCTCTTGGTGTGTCG GGGTATGAGGCTTTTAGCCTATACAAAGGACACAGAGTGATTGCATCCAAGGCAGACCAAGGTACAAATTTGCAAGTGCACCAGCTGGTGATCTATTGTT CATGTGGTGTATTGGCTGGAGTTGTGGGTGGACTTCTTGGGCTGGGAGGAGGATTTATAATGGGTCCACTGTTTTTGGAGCTGGGAGTGCCTCCTCAGGT TTCAAGTGCGACAGCCACATTTGCAATGACTTTCTCCTCATCAATGTCCGTAGTTGAATACTACCTGCTGAGTCGTTTTCCAGTTCCATATGCTCTATAC TTCTTCGCCGTAGCAACAGTGGCTGCATTTGTAGGGCAGCATGTTGTGAGAAAGTTGATTATCGTACTAGGAAGGTCTTCTCTAATCATCTTCATCCTAG CGTTCACCATATTCGTCAGTGCAATCTCCCTAGGTGGTGTTGGCATATCCAACATGATCGGGAAGATTCATCGTCAAGAGTACATGGGATTTGACAATCT ATGTAAATATGATGCTTAA
AA sequence Show only first row Show all	>Lus10011682 pacid=23156329 polypeptide=Lus10011682 locus=Lus10011682.g ID=Lus10011682.BGIv1.0 annot-version=v1.0 MAELGALRRRLILRPISMVLLNLFFGFGLVLADRRLRFQETQELLPSGFLAKAKNFLWQSDQAGGYQHVWPELEFGWKIVVGSIVGFLGAAFGSVGGVGG GGIFVPMLSLIVGFDAKSSTAISKCMIMGAAASTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFVGTSTKAFFK GVETWKKETMMKNEAARRLESSNTGGGDTGYRPLPSGPPKNTNAAEVTIAENVCWKELGLLVFVWVSFLILQIAKNSMDACSVNYWVLNLLQIPVSLGVS GYEAFSLYKGHRVIASKADQGTNLQVHQLVIYCSCGVLAGVVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLSRFPVPYALY FFAVATVAAFVGQHVVRKLIIVLGRSSLIIFILAFTIFVSAISLGGVGISNMIGKIHRQEYMGFDNLCKYDA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G25737			Sulfite exporter TauE/SafE fam...		Lus10011682 [exp]	0	1
AT2G36830		TIP1;1, GAMMA-T...	TONOPLAST INTRINSIC PROTEIN 1;...		Lus10014411 [exp]	3.3	0.9395
AT5G42890		ATSCP2	sterol carrier protein 2 (.1)		Lus10021727 [exp]	4.2	0.9015
AT3G09870			SAUR-like auxin-responsive pro...		Lus10004014 [exp]	7.3	0.9292
AT2G02950		PKS1	phytochrome kinase substrate 1...		Lus10023598 [exp]	7.5	0.9072
AT4G00050	bHLH	bHLH016, UNE10	unfertilized embryo sac 10, ba...		Lus10015734 [exp]	9.8	0.9180
					Lus10002317 [exp]	13.4	0.9097
AT1G17200			Uncharacterised protein family...		Lus10042471 [exp]	15.5	0.9101
AT1G14280		PKS2	phytochrome kinase substrate 2...		Lus10012831 [exp]	17.5	0.9086
AT5G02890			HXXXD-type acyl-transferase fa...		Lus10000592 [exp]	18.1	0.9031
AT1G01630			Sec14p-like phosphatidylinosit...		Lus10004684 [exp]	18.9	0.8930

Compare expression of checked genes

Lus10011682 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.