Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G25737 360 / 8e-121 Sulfite exporter TauE/SafE family protein (.1) AT2G36630 240 / 2e-74 Sulfite exporter TauE/SafE family protein (.1) AT1G61740 96 / 3e-21 Sulfite exporter TauE/SafE family protein (.1) AT1G11540 92 / 3e-20 Sulfite exporter TauE/SafE family protein (.1) AT4G21250 81 / 4e-16 Sulfite exporter TauE/SafE family protein (.1) AT4G21260 45 / 9e-05 Sulfite exporter TauE/SafE family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10011682 [exp] 354 / 2e-118 AT2G25737 632 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10014316 [exp] 328 / 6e-108 AT2G25737 536 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10026025 [exp] 326 / 4e-107 AT2G25737 533 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10029813 [exp] 249 / 1e-77 AT2G36630 612 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10020733 [exp] 246 / 1e-76 AT2G36630 611 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10022134 [exp] 216 / 3e-68 AT2G25737 168 / 8e-50 Sulfite exporter TauE/SafE family protein (.1) Lus10022133 [exp] 109 / 7e-29 AT2G25737 106 / 2e-28 Sulfite exporter TauE/SafE family protein (.1) Lus10020068 [exp] 82 / 1e-16 AT1G61740 371 / 2e-125 Sulfite exporter TauE/SafE family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G037500 [exp] 395 / 1e-134 AT2G25737 529 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.006G242100 [exp] 367 / 1e-123 AT2G25737 568 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037400 [exp] 363 / 9e-122 AT2G25737 535 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.003G053000 [exp] 355 / 8e-119 AT2G25737 501 / 2e-175 Sulfite exporter TauE/SafE family protein (.1) Potri.007G026800 [exp] 352 / 2e-117 AT2G25737 434 / 2e-149 Sulfite exporter TauE/SafE family protein (.1) Potri.005G124200 [exp] 344 / 2e-114 AT2G25737 453 / 1e-156 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183400 [exp] 333 / 3e-110 AT2G25737 418 / 5e-143 Sulfite exporter TauE/SafE family protein (.1) Potri.001G182700 [exp] 323 / 4e-106 AT2G25737 428 / 6e-147 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183300 [exp] 321 / 2e-105 AT2G25737 381 / 2e-128 Sulfite exporter TauE/SafE family protein (.1) Potri.006G117900 [exp] 253 / 2e-79 AT2G36630 578 / 0.0 Sulfite exporter TauE/SafE family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0292 [flax] [poplar] LysE PF01925 [flax] [poplar] TauE Sulfite exporter TauE/SafE
Representative CDS sequence Show only first row Show all	>Lus10011683 pacid=23156330 polypeptide=Lus10011683 locus=Lus10011683.g ID=Lus10011683.BGIv1.0 annot-version=v1.0 ATGGCCGTACGTATACATGAATGTGTGAAGAAAGCACTACTGCTGGGCATTACTGTTACTCTTCTTCTATGGTTAGCTTCTTCCCCATTTGTTTCTGCTA ATGACGAAGAGGAGGCATTATTACCACACACAAGTACTGCTCTGTCTTCATCCACTGGTTCCGAATACCACCATGTTTGGCCCGAAATGGGGTTTGGGTG GAGAATAGTGGGAGCAAGTGTGATTGGATTCCTAGGAGCAGCATTTGGGAGTGTCGGGGGAGTTGGGGGAGGAGGAATATTCGTACCAATGCTCACTCTC ATCATTGGCTTCGATCCTAAATCTGCTACAGCCATCTCCAAGTGTATGATAACTGGAGCAGCTGTTGCTACGGTGGTTTACAATCTTAAGTTGAGACATC CCACTCTTGATCTCCCCATTGTGGAATATGATCTGATTTTGCTCATTCAACCTGTCTTGTTGCTGGGTATCAGTATTGGCGTTACCTTTAACGTCATCTT CCCAGATTGGATGGTCACTATTCTCCTCATCACTCTCCTTTTGGCCACTGCAATAAGGGCATTCTTCAAGGGTCTTGAAATCTGGAAAAAGGAAAGCAGT TTGCAGGAGGCTACTGCTGCCAAGTATTTGAATCCAACAGGGGATTTGGAATACAAGCCTCTTCTAGAAGCCGGCAATGCTAATCTTCCACGACAGGTTA CAGTAATTGAAAACATCCGATGGAAGGAACTTGGACTTGTGACTTTTGTCTGGCTAGCTTACCTCGCCCTTCAGATCTCCAAGATACCAGTGTCGGGGAG TGTGTTTCTGTATCAGGCGATTGGGCTGTACAAAGGAACAAAGAAGATTGGATCCAAGGGAGAAGAAGGAATGAAGAGTTTGAAAGTGAAGCAGCTAGCT TTGTTCTCCATTAGTGGGTTGTTTGCTGGAATAGTTGGTGGCATGTTGGGGTTAGGTGGAGGCTTTGTCATGGGTCCTCTTTTTCTTGAGCTCGGAATTC CTCCTCAGGCAAAATCACATGCCACAGCAACTCTGGGAATGGCCTTCTCTGCATCCATGTCGGTGGCGGAATATTACCTTCTCCATCGCTTCCCTGTTCC TTATGCGCTGTATCTTGTGGGAGTGTCCATTGTGGCTGCATACATTGGACAGTATTTGATCAGTGTGGTGGTGGGGTGGTCAGGGAGGGCATCACTCATC ATATTTGTACTCTCCTTCACAATCTTTGTTAGTGCAATATCACTAGGTGGAATTGGGATCACAAACCTAGTTGAGAAGATAGAAAAGGGAGAATACATGG GATTTGAGAATCTTTGTCAGTATTAA
AA sequence Show only first row Show all	>Lus10011683 pacid=23156330 polypeptide=Lus10011683 locus=Lus10011683.g ID=Lus10011683.BGIv1.0 annot-version=v1.0 MAVRIHECVKKALLLGITVTLLLWLASSPFVSANDEEEALLPHTSTALSSSTGSEYHHVWPEMGFGWRIVGASVIGFLGAAFGSVGGVGGGGIFVPMLTL IIGFDPKSATAISKCMITGAAVATVVYNLKLRHPTLDLPIVEYDLILLIQPVLLLGISIGVTFNVIFPDWMVTILLITLLLATAIRAFFKGLEIWKKESS LQEATAAKYLNPTGDLEYKPLLEAGNANLPRQVTVIENIRWKELGLVTFVWLAYLALQISKIPVSGSVFLYQAIGLYKGTKKIGSKGEEGMKSLKVKQLA LFSISGLFAGIVGGMLGLGGGFVMGPLFLELGIPPQAKSHATATLGMAFSASMSVAEYYLLHRFPVPYALYLVGVSIVAAYIGQYLISVVVGWSGRASLI IFVLSFTIFVSAISLGGIGITNLVEKIEKGEYMGFENLCQY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G25737			Sulfite exporter TauE/SafE fam...		Lus10011683 [exp]	0	1
AT5G41050			Pollen Ole e 1 allergen and ex...		Lus10032018 [exp]	2.8	0.8920
AT5G56850			unknown protein		Lus10032679 [exp]	4.5	0.8886
AT3G55120		A11, CFI, TT5	TRANSPARENT TESTA 5, CHALCONE ...		Lus10003311 [exp]	4.9	0.8213
AT2G47240		CER8, LACS1	LONG-CHAIN ACYL-COA SYNTHASE 1...		Lus10002414 [exp]	10.8	0.8695
AT5G65280		GCL1	GCR2-like 1 (.1)		Lus10035926 [exp]	12.5	0.8382
AT2G23140			RING/U-box superfamily protein...		Lus10019308 [exp]	13.9	0.8350
AT5G41050			Pollen Ole e 1 allergen and ex...		Lus10035187 [exp]	15.7	0.8573
AT5G54290		CcdA	cytochrome c biogenesis protei...		Lus10038581 [exp]	18.9	0.8530
AT2G29760		OTP81	ORGANELLE TRANSCRIPT PROCESSIN...		Lus10040680 [exp]	24.7	0.8344
AT2G25737			Sulfite exporter TauE/SafE fam...		Lus10022133 [exp]	25.5	0.7883

Compare expression of checked genes

Lus10011683 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.