Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36800 475 / 6e-165 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36780 474 / 2e-164 UDP-Glycosyltransferase superfamily protein (.1) AT2G36750 464 / 1e-160 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36760 460 / 6e-159 UGT73C2 UDP-glucosyl transferase 73C2 (.1) AT2G36770 457 / 7e-158 UDP-Glycosyltransferase superfamily protein (.1) AT2G36790 456 / 2e-157 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT3G53160 456 / 2e-157 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT3G53150 408 / 2e-138 UGT73D1 UDP-glucosyl transferase 73D1 (.1) AT4G34131 352 / 7e-117 UGT73B3 UDP-glucosyl transferase 73B3 (.1) AT2G15480 338 / 1e-111 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016268 [exp] 855 / 0 AT2G36780 498 / 1e-173 UDP-Glycosyltransferase superfamily protein (.1) Lus10003323 [exp] 666 / 0 AT2G36800 493 / 2e-171 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Lus10003322 [exp] 620 / 0 AT2G36780 468 / 9e-162 UDP-Glycosyltransferase superfamily protein (.1) Lus10014437 [exp] 580 / 0 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10023939 [exp] 481 / 4e-167 AT2G36780 485 / 7e-169 UDP-Glycosyltransferase superfamily protein (.1) Lus10023893 [exp] 441 / 1e-151 AT2G36780 495 / 1e-172 UDP-Glycosyltransferase superfamily protein (.1) Lus10022628 [exp] 432 / 3e-149 AT2G36780 310 / 1e-101 UDP-Glycosyltransferase superfamily protein (.1) Lus10023894 [exp] 431 / 2e-147 AT2G36780 516 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10014403 [exp] 428 / 2e-146 AT2G36780 506 / 6e-177 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G048700 [exp] 468 / 3e-162 AT2G36800 550 / 0.0 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Potri.006G120600 [exp] 437 / 5e-150 AT3G53150 617 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.016G097400 [exp] 432 / 2e-147 AT3G53150 626 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.001G303700 [exp] 388 / 8e-131 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303300 [exp] 381 / 3e-128 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.009G098400 [exp] 373 / 7e-125 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302300 [exp] 372 / 1e-124 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1) Potri.001G303000 [exp] 370 / 7e-124 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G099032 [exp] 369 / 2e-123 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303600 [exp] 367 / 1e-122 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10012011 pacid=23161463 polypeptide=Lus10012011 locus=Lus10012011.g ID=Lus10012011.BGIv1.0 annot-version=v1.0 ATGGCACAGGGCCACATGATCCCGATGGTCGACATCGCCAAGCTCCTTGCCACTCGAGGAGCCAAGGTCACCATAGTGACCACCCCGGTGAATGCTGCCC GGTTCAAGTCCCCTATCCGTCGGTCCAACCTCCGAATCGACCTGGTCGAGCTACGTTTCCCCGGCGTCGAAGCAGGGCTCCCCGAAGGCTGCGAGAACGT CGACCTGCTCCCTTCTTTTGCCTACATACAATCCATGATGAAGGCAGCCGCCATGATGGAACCTCAGGTCGAGTCTTTGCTCGAAAGCATGAGGGTAAAA CCAGACTGCATCATCTCCGGTTTTTGCTTGCCGTATGTCGATAATGTGGCGAAGAAGTTTAACGTCCCTAGGGTTAGCTTCCATGGGATTGGATGTTTCT CCCTCTTGTGTTTGCAATGCATTATGGTCCATCAGGAGGAAATAGCTCGTATGGTGGGCTCCGATCAAGAGTACTTTGTTCTCCCCGGAATGCCGGGGGA GATCAAGTTCTCCAATGCTCAGTTGCCGCTACAAATATGGAAGAACGGACATCAGGATCCTGAAGAAGAGTCTCGTCGTCTGCACGTGATGAAAGTAGAC TCGGAAGCTTATGGTGTGATCGTTAATAGCTTCGAAGAACTCGAACCGGAGTACTTCTCCGAGTACAAGAACTCAAGACAGGGCAAAATATGGTGTGTCG GGCCCGTTTCCTTGACCAATCTCGACGAATTGGACAAAATCCAAAGAGGGAATTACAACATCTCTCTCACACATGAGTCTCTCGAGTGGCTAAACACCAA AGAATCCAAGTCGGTCCTTTACATCTGCTTAGGATCGATATGCAACCTGTCGTCCCAACAGTTGATTGAGCTGGCACTAGGCCTCGAGGCCTCCGAAACC CCCTTCGTATGGGCGATCCGTGAGAAAGGGTTTACAAAAGACCTGTTCACGTGGATCACAAATGACGGATTTGAGAACAGGGTCGCGGGGAGAGGGTTGC TCATTAAAGGGTGGGCACCCCAACTCTCGATATTATCTCATAGTTCGGTGGGAGGGTTCTTAACACACTGCGGGTGGAACTCTTCTTTAGAAGGGATCAG TGCGGGGATCCCCCTCGTTACGTGGCCGCTCTTTGGAGACCAATTCAGCAACGAGAAGCTAATTGTCGATGTTTTAAAGATAGGAGTGAGGATTGGTGCA GAAAAGCCGACGTTTAGGAGTGGGAAAGAAGAGACGACAGAGGTAAGTGTTAGGAGAGAAGATGTGGAGAGAGCAGTTCGGTTGGCCATGGAGGGCGGCA AGGACGGAGACAGGAGAAGGAAGAGAACTGGGGAGCTTGCCGGAATGGCGTGGAAAGCCGTGGAGAGAGGTGGATCTTCGTATAAGAACGTCGACCTTTT GATTCAAGACATTGCGAAACATCAAGAGGAGAGGAGAAATCATGGGTGA
AA sequence Show only first row Show all	>Lus10012011 pacid=23161463 polypeptide=Lus10012011 locus=Lus10012011.g ID=Lus10012011.BGIv1.0 annot-version=v1.0 MAQGHMIPMVDIAKLLATRGAKVTIVTTPVNAARFKSPIRRSNLRIDLVELRFPGVEAGLPEGCENVDLLPSFAYIQSMMKAAAMMEPQVESLLESMRVK PDCIISGFCLPYVDNVAKKFNVPRVSFHGIGCFSLLCLQCIMVHQEEIARMVGSDQEYFVLPGMPGEIKFSNAQLPLQIWKNGHQDPEEESRRLHVMKVD SEAYGVIVNSFEELEPEYFSEYKNSRQGKIWCVGPVSLTNLDELDKIQRGNYNISLTHESLEWLNTKESKSVLYICLGSICNLSSQQLIELALGLEASET PFVWAIREKGFTKDLFTWITNDGFENRVAGRGLLIKGWAPQLSILSHSSVGGFLTHCGWNSSLEGISAGIPLVTWPLFGDQFSNEKLIVDVLKIGVRIGA EKPTFRSGKEETTEVSVRREDVERAVRLAMEGGKDGDRRRKRTGELAGMAWKAVERGGSSYKNVDLLIQDIAKHQEERRNHG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36780			UDP-Glycosyltransferase superf...		Lus10012011 [exp]	0	1
AT4G37980		ELI3-1, ATCAD7	CINNAMYL-ALCOHOL DEHYDROGENASE...		Lus10023268 [exp]	1.4	0.9738
AT5G45290			RING/U-box superfamily protein...		Lus10016428 [exp]	3.2	0.9680
AT1G14180			RING/U-box superfamily protein...		Lus10036764 [exp]	3.9	0.9675
AT5G35200			ENTH/ANTH/VHS superfamily prot...		Lus10003642 [exp]	5.4	0.9247
AT5G19530		ACL5	ACAULIS 5, S-adenosyl-L-methio...		Lus10000469 [exp]	5.5	0.9391
AT1G14185			Glucose-methanol-choline (GMC)...		Lus10032347 [exp]	6.3	0.9605
AT1G16310			Cation efflux family protein (...		Lus10001768 [exp]	7.7	0.9613
AT3G58360			TRAF-like family protein (.1)		Lus10012948 [exp]	8.1	0.9385
AT4G21340	bHLH	bHLH103, B70	basic helix-loop-helix (bHLH) ...		Lus10005959 [exp]	8.2	0.9057
AT4G23430		AtTic32-IVa	translocon at the inner envelo...		Lus10024685 [exp]	9.5	0.9403

Compare expression of checked genes

Lus10012011 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.