Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G49740 91 / 5e-21 ATFRO7, FRO7 ferric reduction oxidase 7 (.1) AT5G49730 88 / 4e-20 ATFRO6, FRO6 ferric reduction oxidase 6 (.1) AT1G01580 44 / 3e-05 FRD1, ATFRO2, FRO2 FERRIC CHELATE REDUCTASE DEFECTIVE 1, ferric reduction oxidase 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007586 [exp] 222 / 2e-68 AT5G49740 867 / 0.0 ferric reduction oxidase 7 (.1) Lus10039268 [exp] 40 / 0.0008 AT1G01580 722 / 0.0 FERRIC CHELATE REDUCTASE DEFECTIVE 1, ferric reduction oxidase 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G079000 [exp] 110 / 4e-28 AT5G49730 886 / 0.0 ferric reduction oxidase 6 (.1) Potri.004G079100 [exp] 42 / 0.0002 AT1G01580 692 / 0.0 FERRIC CHELATE REDUCTASE DEFECTIVE 1, ferric reduction oxidase 2 (.1) Potri.014G088000 [exp] 41 / 0.0003 AT1G01580 762 / 0.0 FERRIC CHELATE REDUCTASE DEFECTIVE 1, ferric reduction oxidase 2 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10012160 pacid=23154921 polypeptide=Lus10012160 locus=Lus10012160.g ID=Lus10012160.BGIv1.0 annot-version=v1.0 ATGGACCATCAGAAACCAGCTGCAAAATTACTCGGACAGCCGCTCCTCGCCGATGGAGATGATGATCGGAAGCTCAGAGGCGCCCCCGCCGCCGCCGACC GGTTCAGGGGATTCGCCAAATGGGTTCTCAAGATGTTGATGTGGGCAATCTTCGTTGCGTGGGTCACTCTCATCTTCGTCTTCCCAACTGAGCTGGGCAA CGATTTGGTCTTCAAGAAGTGGACTGCCCTCACCCAGATTCCTCTCACGGGTAGCTTGTTGTTGCTGCTGGCCGGACCGGTGCTTCTCATTGCACTGCTG GCTGCGGCTCATCTCATCATTTCCGAGGAAGGGGAGCATCACCTTTACCGGAAGAAGAGCTGGAAGTACCCGAGACCCCAGCTATGGACATTCCCTGTGA TCGTGGATGGACCACTCGGGGTTGTATCGGCGACAGAGCTTATCGGAGTTGTGCTCTTCATTGGCTACATTGTATGGGCTCTCTACCTCTACACCATCAG GAACCTCGCCCTCTTGTCTTCTACACCCTCACTCTCCCACAATTCAGGTGCGTCCCTGCAGTCAAGTCTAATTGATAACAGTACCGTGAGTCGAGTCTGA
AA sequence Show only first row Show all	>Lus10012160 pacid=23154921 polypeptide=Lus10012160 locus=Lus10012160.g ID=Lus10012160.BGIv1.0 annot-version=v1.0 MDHQKPAAKLLGQPLLADGDDDRKLRGAPAAADRFRGFAKWVLKMLMWAIFVAWVTLIFVFPTELGNDLVFKKWTALTQIPLTGSLLLLLAGPVLLIALL AAAHLIISEEGEHHLYRKKSWKYPRPQLWTFPVIVDGPLGVVSATELIGVVLFIGYIVWALYLYTIRNLALLSSTPSLSHNSGASLQSSLIDNSTVSRV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G49740		ATFRO7, FRO7	ferric reduction oxidase 7 (.1...		Lus10012160 [exp]	0	1
AT5G49740		ATFRO7, FRO7	ferric reduction oxidase 7 (.1...		Lus10012161 [exp]	1.0	0.9496
AT1G34060			Pyridoxal phosphate (PLP)-depe...		Lus10028695 [exp]	2.0	0.9387
AT4G27360			Dynein light chain type 1 fami...		Lus10038566 [exp]	2.0	0.9127
AT1G52510			alpha/beta-Hydrolases superfam...		Lus10025787 [exp]	5.7	0.9173
AT3G19490		ATNHD1	ARABIDOPSIS THALIANA NA/H ANTI...		Lus10014094 [exp]	7.3	0.9059
AT3G18430			Calcium-binding EF-hand family...		Lus10042708 [exp]	8.4	0.9100
AT3G57680			Peptidase S41 family protein (...		Lus10040494 [exp]	10.4	0.8738
AT1G72030			Acyl-CoA N-acyltransferases (N...		Lus10021995 [exp]	10.6	0.9027
AT5G49740		ATFRO7, FRO7	ferric reduction oxidase 7 (.1...		Lus10007586 [exp]	12.0	0.8955
AT5G14860			UDP-Glycosyltransferase superf...		Lus10022222 [exp]	14.4	0.8830

Compare expression of checked genes

Lus10012160 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.