Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G61560 315 / 2e-102 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G17480 313 / 1e-101 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT2G39200 304 / 2e-98 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT5G65970 282 / 6e-90 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT2G17430 275 / 1e-87 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT1G11310 272 / 1e-87 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT1G26700 203 / 9e-60 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT2G33670 198 / 2e-58 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G42560 196 / 6e-58 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT5G53760 197 / 2e-57 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016035 [exp] 656 / 0 AT1G11310 317 / 7e-100 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Lus10019630 [exp] 327 / 1e-106 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 317 / 6e-104 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 303 / 1e-97 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10013211 [exp] 301 / 1e-97 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10036120 [exp] 296 / 4e-95 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10041410 [exp] 296 / 4e-95 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 294 / 3e-94 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10040388 [exp] 271 / 4e-85 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G064200 [exp] 426 / 5e-146 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 327 / 4e-107 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.005G099200 [exp] 325 / 1e-106 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 323 / 1e-105 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.005G254300 [exp] 314 / 2e-102 AT1G11310 461 / 3e-157 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.002G007000 [exp] 302 / 1e-97 AT1G11310 448 / 7e-152 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.016G088000 [exp] 292 / 7e-95 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.002G006700 [exp] 275 / 1e-87 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Potri.009G011900 [exp] 259 / 1e-80 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.010G220500 [exp] 247 / 3e-76 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10012241 pacid=23172684 polypeptide=Lus10012241 locus=Lus10012241.g ID=Lus10012241.BGIv1.0 annot-version=v1.0 ATGGCTGGAGGTGAAGGTGGCAGTGGAGACCGCTCCCTGCATGACACACCCACTTGGGCAGTGGCAGCCGTCTGTGCAATCTTCATCATCTTGTCCATTC TTCTAGAACATTCTCTCCTCAAACTTGGGAATTGGTTCCAGAAGCGGCAGAAGAGGGCCATGATCGATGCTCTCGAGAAGGTTAAAGCCGAGCTAATGCT GTTGGGGTTCATATCACTGCTGCTGACGGCGGGGACAAGAGCCATCCCGAGGATATGCATCTCTCACCAACTTAGTAGAACGATGCTCCCTTGCAGTACT GGTTCGAGCGATGATGATCACTCCTACAATGACGAAGGTGGTGAGGATCACGAGAGAAGGAAGCTGCTTTCCTTTAATGGGAATTCATGGCATCATCGTA TGTTGGCTGGAGCTGAAGGTGGTGCAGATTACTGCTCATCTAAGGGGAAAGTGCCACTGATATCAGTGACAGGAGTGCATCAGCTGCACATTTTTGTGTT TGTGCTAGCGGTTTTCCATATTGTATATTGTGTCATCACCATGACCCTTGGCAGAGCTAAAGTGAAGAAATGGAAGACATGGGAGTCTGAGACATCTTCT GTGGAGTACCAGTTCACTAACGATCCAACGAGGTTCAGATTAGCACACCAGACCTCATTTGTAAAGAGGCACTCTGGCATCTTCAATGCACCTGGGATCA GATGGATTGTCGCGTTTTTTAGACAGTTCACTGGTTCGATCACGAAAGTAGATTACTTGACCATGAGAAATGGATTCATTAATATACTTCTGGTGGTGGG TACAAAGCTGGAGCTAGTGATAATGGACATGGCTCAACAGATTCAAGAAAGGAGCACAGTCGTGAGAGGAGCTCCAATCGTTGAACCTAACAACAGTTAC TTCTGGTTCAACCGTCCTCAATGGATTCTCCTCTTAATCCACTACACTCTCTTCCAGAATGCCTTCCAAATGGCTTACGTGCTGTGGAATTGGTATGAAT TCAAGTTCAACAACTGCTTCAGGGAGAACACTGCCGCAATCATGGTCAGGCTTTCCCTTGCAGTAATCCTACAGTTCATCTGCAGCTACATCACCTTCCC TCTCTATTCTCTCGTCACCCAAGTCAGTAACTCTGCCAATCATTTCGCCTCCTCCCAAATTCAAAGGCGGTGGCGGCGGCGGTCAAGTGTTGACTAG
AA sequence Show only first row Show all	>Lus10012241 pacid=23172684 polypeptide=Lus10012241 locus=Lus10012241.g ID=Lus10012241.BGIv1.0 annot-version=v1.0 MAGGEGGSGDRSLHDTPTWAVAAVCAIFIILSILLEHSLLKLGNWFQKRQKRAMIDALEKVKAELMLLGFISLLLTAGTRAIPRICISHQLSRTMLPCST GSSDDDHSYNDEGGEDHERRKLLSFNGNSWHHRMLAGAEGGADYCSSKGKVPLISVTGVHQLHIFVFVLAVFHIVYCVITMTLGRAKVKKWKTWESETSS VEYQFTNDPTRFRLAHQTSFVKRHSGIFNAPGIRWIVAFFRQFTGSITKVDYLTMRNGFINILLVVGTKLELVIMDMAQQIQERSTVVRGAPIVEPNNSY FWFNRPQWILLLIHYTLFQNAFQMAYVLWNWYEFKFNNCFRENTAAIMVRLSLAVILQFICSYITFPLYSLVTQVSNSANHFASSQIQRRWRRRSSVD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G45290		ATMLO3, MLO3	MILDEW RESISTANCE LOCUS O 3, S...		Lus10012241 [exp]	0	1
AT2G02990		RNS1, ATRNS1	ribonuclease 1 (.1)		Lus10012823 [exp]	10.6	0.7091
AT2G27035		AtENODL20	early nodulin-like protein 20 ...		Lus10025536 [exp]	29.0	0.6354
AT3G54200			Late embryogenesis abundant (L...		Lus10039665 [exp]	78.8	0.6183
					Lus10023198 [exp]	80.5	0.6436
AT5G63180			Pectin lyase-like superfamily ...		Lus10022310 [exp]	81.2	0.6128
AT5G53840			F-box/RNI-like/FBD-like domain...		Lus10025675 [exp]	112.6	0.6011
AT1G60400			F-box/RNI-like superfamily pro...		Lus10038935 [exp]	112.9	0.6011
AT3G29635			HXXXD-type acyl-transferase fa...		Lus10003344 [exp]	149.0	0.6094

Compare expression of checked genes

Lus10012241 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.