Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006371 [exp] 42 / 4e-05 AT5G26730 140 / 5e-41 Fasciclin-like arabinogalactan family protein (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10012326 pacid=23176787 polypeptide=Lus10012326 locus=Lus10012326.g ID=Lus10012326.BGIv1.0 annot-version=v1.0 ATGCCCGTCCTACACTTATTTGCTTCCAACGTCTCCAACATCGCCAACGTCTCCAACATCGCGAACGTCGCCATCATTGTTGCTGCTATACCTATAATCA CCGTCGTTGCTACACCCCTACCCCCTTCCAAGAAGCACGACCAGGACATCATCCCTGCATCACCAACCGGTCAGTCAAAAGCGACCGATGCCGCCATTAA GTTTGATGACGCTGACTCTTCTCCCCCTACCTCGGCATCTCTCGTAACGCTCGACCTCAGCCTCGATGTTCGTACTCCAATGTCGCCGGTGTCTGCGAAT TCTGCCTCTGATGCAGGATCTTCATCGTCCCCGCATCTGGGTGATATCCCTGCACCGCACTCATCGTTAAAAATTGTAACCTTGTAA
AA sequence Show only first row Show all	>Lus10012326 pacid=23176787 polypeptide=Lus10012326 locus=Lus10012326.g ID=Lus10012326.BGIv1.0 annot-version=v1.0 MPVLHLFASNVSNIANVSNIANVAIIVAAIPIITVVATPLPPSKKHDQDIIPASPTGQSKATDAAIKFDDADSSPPTSASLVTLDLSLDVRTPMSPVSAN SASDAGSSSSPHLGDIPAPHSSLKIVTL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10012326 [exp]	0	1
					Lus10033874 [exp]	2.2	0.7664
AT4G34131		UGT73B3	UDP-glucosyl transferase 73B3 ...		Lus10014079 [exp]	5.0	0.6156
AT4G26120			Ankyrin repeat family protein ...		Lus10024842 [exp]	8.8	0.6498
					Lus10012084 [exp]	13.6	0.6284
					Lus10013877 [exp]	14.5	0.6127
AT2G45550		CYP76C4	"cytochrome P450, family 76, s...		Lus10028896 [exp]	15.2	0.6332
AT2G44480		BGLU17	beta glucosidase 17 (.1.2)		Lus10031808 [exp]	21.2	0.6076
AT3G55150		ATEXO70H1	exocyst subunit exo70 family p...		Lus10023452 [exp]	24.3	0.5961
					Lus10013529 [exp]	25.7	0.5722
AT2G04040		ATDTX1	detoxification 1, MATE efflux ...		Lus10009132 [exp]	26.0	0.5789

Compare expression of checked genes

Lus10012326 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.