Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G04845 286 / 2e-99 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006397 [exp] 325 / 8e-114 AT2G04845 238 / 2e-79 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G161800 [exp] 323 / 9e-114 AT2G04845 279 / 6e-96 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0257 [flax] [poplar] Acetyltrans PF08445 [flax] [poplar] FR47 FR47-like protein
Representative CDS sequence Show only first row Show all	>Lus10012349 pacid=23176807 polypeptide=Lus10012349 locus=Lus10012349.g ID=Lus10012349.BGIv1.0 annot-version=v1.0 ATGGCGGCGGTGAGCTTGGAAGGAGAGAAGGTGATACTGGTACCTTACATGGAAGCCCATGTCCCAAAATACCATCAATGGATGCAGGATCCGGTTCTAC TCCAAGCAACCGGGTCCGAGCCGCTTTCCCTTCAAGAAGAGTACAATATGCAGCTCTCCTGGACCCAAGACCCTCTCAAACGGACATTTATTGTTCTGGA CAAGGGTTTCGTGCAGGGAGGATTTTTTCATGGAGATCCACATGTTGAAGCCATGGTGGGTGATGTGAATATATACATGAACGACTTGGATGATCCTCAA ATGGCTGAAGTGGAGATAATGATCGCTGAGCCGAAAAGCCGTGGTAAAGGACTTGGCGAAGAATCTGTTCTTATGATGATGGCCTATGCAATCGATAGCC TAGGGATCCGCGTCTTTCGAGTTAAAATTGGAGAAGCAAATGGAGCATCTCTTAGTCTCTTCAGAAAATTGGGATTCGAGCAAGCTTCACGCAGCGAAAT ATTTAAAGAGGTGACACTGGAATTGCCAGTGACGGAGCAGAAGCGTGAAGAGTTTCTGAATTTGAAGGGTAAAGTAGTCATGCATACATAA
AA sequence Show only first row Show all	>Lus10012349 pacid=23176807 polypeptide=Lus10012349 locus=Lus10012349.g ID=Lus10012349.BGIv1.0 annot-version=v1.0 MAAVSLEGEKVILVPYMEAHVPKYHQWMQDPVLLQATGSEPLSLQEEYNMQLSWTQDPLKRTFIVLDKGFVQGGFFHGDPHVEAMVGDVNIYMNDLDDPQ MAEVEIMIAEPKSRGKGLGEESVLMMMAYAIDSLGIRVFRVKIGEANGASLSLFRKLGFEQASRSEIFKEVTLELPVTEQKREEFLNLKGKVVMHT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G04845			Acyl-CoA N-acyltransferases (N...		Lus10012349 [exp]	0	1
AT3G62190			Chaperone DnaJ-domain superfam...		Lus10009981 [exp]	5.5	0.7966
AT2G13680		GLS2, ATGSL02, ...	ARABIDOPSIS THALIANA GLUCAN SY...		Lus10033483 [exp]	7.1	0.7901
AT1G17330			Metal-dependent phosphohydrola...		Lus10040985 [exp]	8.7	0.8578
AT1G25520			Uncharacterized protein family...		Lus10035040 [exp]	10.7	0.8091
AT5G22320			Leucine-rich repeat (LRR) fami...		Lus10005198 [exp]	16.6	0.8316
AT5G36930			Disease resistance protein (TI...		Lus10007829 [exp]	19.4	0.8219
AT5G03530		ATRABALPHA, AtR...	ARABIDOPSIS THALIANA RAB GTPAS...		Lus10038671 [exp]	21.2	0.7293
AT4G30900			DNAse I-like superfamily prote...		Lus10036262 [exp]	24.6	0.8065
AT3G54380		AtSAC3C	yeast Sac3 homolog C, SAC3/GAN...		Lus10024110 [exp]	30.9	0.8110
AT2G35035		URED	urease accessory protein D (.1...		Lus10007861 [exp]	31.6	0.7723

Compare expression of checked genes

Lus10012349 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.