Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G03290 138 / 5e-34 unknown protein AT4G02880 137 / 1e-33 unknown protein AT5G64980 64 / 9e-11 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028005 [exp] 824 / 0 AT1G03290 280 / 2e-84 unknown protein Lus10028006 [exp] 249 / 3e-73 AT1G03290 262 / 2e-80 unknown protein Lus10012381 [exp] 234 / 6e-68 AT1G03290 238 / 2e-71 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G139000 [exp] 146 / 6e-37 AT1G03290 268 / 1e-82 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10012382 pacid=23176798 polypeptide=Lus10012382 locus=Lus10012382.g ID=Lus10012382.BGIv1.0 annot-version=v1.0 ATGGGGTTCAAATCTGTTTATCAGTCTCTGATGGATGTCTTCCCTCAGGTTGACGTCCGAATTCTGAGGGCTGTTGCTCTTGAGCATTCAAAGGACCCTG ATTTGGCTGTGGAATCGGTTCTTTCTGAGATACTTCCTGTCCTGGAGAGTAAATCCCAGGTTTCTCAACATACTCCTCAGAGACCAGAAGAAGAACCTGA ACTGCTGAAGCAAACTGATCTCTTGCACCGTAGACCGAGTGGTTCAGGGAAGAACATGGTTGCTTCGTCCGATGCTTCTTCTTCAAGAGCACAATCAGCT GTTTCCGACGATCTTAGAAATGATCTTGGAAGTTGGGATCATCATCTTGTTGGTTTGACAATAGATAATTTTAGAGAAGATTTTAGGAGTTGGGATAATC GTTCTGCTGCCCCCAGTTTGTCTAACGGTCCTAAGGCCACTTGGGTCGATGGTGTTAGGGTTGATAATGGGAGTCCGAGCCGTCATGTTTCCTCTGCAGG GGTAGATAGTCCTGAAGATCCTTTTACGAGTCGGGGTAAGCGTGTTGCTACACCCCCTTCCCTCAAAGCTGTTGGGGTTCCCCTTTTCCTCAAAGCTGCT GGAGTTGATAAGAGGAGTCGGGGTCATCAGGTTCCTGCTGCGAGTATAGATAATCTCAGAGATGATTTTAGGAGGTGGGATAATCTTGGTGCTCCCTCCA GTTCAGTCAATCCTGTTGGAGGTAATAATGGGAGCTGGTTTGGTCTTAATGTTGCTGCCCCCAATGTAGACGATCTTAAAAACGATTTCATGAATCGGGA TCATCATGTTGCTTCCAACATAGATGGTCTTCGAATTGGGGGCCAGGGTCATCAAGTTGGTTCTTCTAGCAGTCAGAATATGGAGAAGATCATCCCCCTC TCATCTTCAAACCGGCAACAGGCCAAGGTAGATGATAATGAGGGTTGGGGTCCTTATATTTGTTCTTCTAGGAGCCAGAATTTGGAGATCGTAATCCCAC CCTCGTCTCCAAACCCACAACAGGAGATTAATCAGTTGCAAAAGATTGTAGATAGTGAAGAACTGATTTTGCTTCATAAGGTTCCAGATCAAGGAGAGAA CGCCACGTCTGATTCAATTCAGGCTACTCCCGTTACCGAGGATGATGTGACTTCTCAAGTCGGTAAATGCAATGATGGTGAAGTTTTCTTTGATTCTGAA AATGAGATACCTTCTCCCGAAAAATTTGAAGATGCTGACGGCATAGTTGACTCTGAGCACATCCCTCCTGTCGTGTCTGCATTAGAAGGAGATGCTTCCT CTGGTAGTGTTTTGCCTGAACAAGAAAAGGAAGAGAGAACTTCCCATGCTACTTTGTATGCACTTGATGTGGCTGTTGCTGAGAATGTTGGCGAGAAAGT TGCTGAAGTAAATGCAGAAGTTGATGCTTCCTCTGGTAGTGTTTTGGCTGAACAAGAGAGGGAAGAGAGAATTTCCCATGCTACTTTGGATGTACTTGAT GTGGCTGTTGGTGAGAATGTTGGCGAGAAAGTTGGTGAAGTAAATCCAGGGGTTAATGTTGCTATTGACTTGAACGTTTCTTCAGTAGAGCAGGATGTAG CTATGGGTGATTTTAGTTATGAAATTTCAAGCAGCAGTCCAAGTAATGTGAGCATTGAGGTTCTGGAGGAGATCATTGAAGCTGGTAAAGACAACAAGGA GTTGCAAGCTCGTGTAGCTAATCTGTCTGACGAAAGAGACTCTGCTCTAGCAGTTCTAGATGAGATGCATCAAGTGTTGGAAGAACGTTTGGTGGCAGCA GAAGAGCTGCTAAGAGCAGCTGAACAGGAGAAGTTTGTCAAGGAAGAGTCTGCACGCGAAGCTCTTGCTTATCAACAATTTATGATGGAGAAAGTCGTTC ATGAGTCGAAGATCCTGCAAGAGGCAGCAGAAGAAAATTCGAAGTTGCGGGAATTTCTTATGGATCGCGGTCATGTGGTTGATACTCTGCAAGGAGAGAT ATCCGTCATCTGTCAGGACGTTCGTTTGCTGAAGGAGAAGATCGACAATCGCGTCCCGTTGAGCCAATCCATCTCTTCGAGCCAGACAAGTTGCATCCTA GCTTCTTCAGGCTCGTCCTCTAGAACTGTTTTGGCAATGAATGTTTCTCCTGCGTTTGGCGATGCATCTTTTGTCTCGAAACATATGAGTCCTGCATCCT CTGTGCATGCCAGTTCACCTAGGAGCAAAGATGCTGAAGCTTCCCTGTCATCAACTGAGAATGATGCTTTTGAGGAAATGATGATTGCGAAAGAGCCGGT TCTGGATGATGAATGGGATCTAGTCGATGCAACTGCTATATCTGCTTAG
AA sequence Show only first row Show all	>Lus10012382 pacid=23176798 polypeptide=Lus10012382 locus=Lus10012382.g ID=Lus10012382.BGIv1.0 annot-version=v1.0 MGFKSVYQSLMDVFPQVDVRILRAVALEHSKDPDLAVESVLSEILPVLESKSQVSQHTPQRPEEEPELLKQTDLLHRRPSGSGKNMVASSDASSSRAQSA VSDDLRNDLGSWDHHLVGLTIDNFREDFRSWDNRSAAPSLSNGPKATWVDGVRVDNGSPSRHVSSAGVDSPEDPFTSRGKRVATPPSLKAVGVPLFLKAA GVDKRSRGHQVPAASIDNLRDDFRRWDNLGAPSSSVNPVGGNNGSWFGLNVAAPNVDDLKNDFMNRDHHVASNIDGLRIGGQGHQVGSSSSQNMEKIIPL SSSNRQQAKVDDNEGWGPYICSSRSQNLEIVIPPSSPNPQQEINQLQKIVDSEELILLHKVPDQGENATSDSIQATPVTEDDVTSQVGKCNDGEVFFDSE NEIPSPEKFEDADGIVDSEHIPPVVSALEGDASSGSVLPEQEKEERTSHATLYALDVAVAENVGEKVAEVNAEVDASSGSVLAEQEREERISHATLDVLD VAVGENVGEKVGEVNPGVNVAIDLNVSSVEQDVAMGDFSYEISSSSPSNVSIEVLEEIIEAGKDNKELQARVANLSDERDSALAVLDEMHQVLEERLVAA EELLRAAEQEKFVKEESAREALAYQQFMMEKVVHESKILQEAAEENSKLREFLMDRGHVVDTLQGEISVICQDVRLLKEKIDNRVPLSQSISSSQTSCIL ASSGSSSRTVLAMNVSPAFGDASFVSKHMSPASSVHASSPRSKDAEASLSSTENDAFEEMMIAKEPVLDDEWDLVDATAISA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G03290			unknown protein		Lus10012382 [exp]	0	1
AT5G26990			Drought-responsive family prot...		Lus10031467 [exp]	3.7	0.9102
AT1G11530		ATCXXS1	C-terminal cysteine residue is...		Lus10020070 [exp]	4.2	0.9090
AT1G08315			ARM repeat superfamily protein...		Lus10026170 [exp]	8.1	0.8553
AT1G69550			disease resistance protein (TI...		Lus10007827 [exp]	10.7	0.8438
AT5G49230		HRB1	HYPERSENSITIVE TO RED AND BLUE...		Lus10017097 [exp]	11.0	0.8770
AT4G32600			RING/U-box superfamily protein...		Lus10008106 [exp]	13.0	0.8318
AT5G57580			Calmodulin-binding protein (.1...		Lus10001436 [exp]	13.1	0.9001
AT4G33540			metallo-beta-lactamase family ...		Lus10027583 [exp]	14.3	0.8627
AT4G31450			RING/U-box superfamily protein...		Lus10020145 [exp]	15.0	0.9053
AT2G02800		Kin2, APK2B	protein kinase 2B (.1.2)		Lus10012850 [exp]	15.5	0.8964

Compare expression of checked genes

Lus10012382 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.