Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G74250 141 / 9e-37 DNAJ heat shock N-terminal domain-containing protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10022344 [exp] 301 / 9e-101 AT1G74250 204 / 5e-61 DNAJ heat shock N-terminal domain-containing protein (.1) Lus10034688 [exp] 151 / 2e-40 AT1G74250 468 / 5e-158 DNAJ heat shock N-terminal domain-containing protein (.1) Lus10017846 [exp] 150 / 4e-40 AT1G74250 464 / 1e-156 DNAJ heat shock N-terminal domain-containing protein (.1) Lus10026920 [exp] 44 / 0.0003 AT5G06110 681 / 0.0 DnaJ domain ;Myb-like DNA-binding domain (.1.2) Lus10020118 [exp] 44 / 0.0003 AT5G06110 749 / 0.0 DnaJ domain ;Myb-like DNA-binding domain (.1.2) Lus10026919 [exp] 42 / 0.0007 AT5G06110 752 / 0.0 DnaJ domain ;Myb-like DNA-binding domain (.1.2) Lus10020117 [exp] 42 / 0.0007 AT5G06110 736 / 0.0 DnaJ domain ;Myb-like DNA-binding domain (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G018400 [exp] 144 / 7e-38 AT1G74250 460 / 2e-155 DNAJ heat shock N-terminal domain-containing protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10012524 pacid=23143857 polypeptide=Lus10012524 locus=Lus10012524.g ID=Lus10012524.BGIv1.0 annot-version=v1.0 ATGTTGTCGATGCTGTTTGATGATGATGATAGTGCTGTTCCAGATGAACTTCCTTTGTTCAATGTCCTTGGTGGAGCACAGGATTCCCCTGTCTTAGTAG ATGTCGACCTCGTTGAGAATGTTGTTGGTGTAGACCTCGCATTAGTATTGGCTCCCGGTGAACGTCCTGCTTTTTCTGTTGCTGAATTAATCTCCAACCA GATGAATTTCCTTTGTTCAATGTTCGTGGAGCACAAGATGCCCCTATCGGAATGGATGTCCACCTCGGTCAGAATGTTGTCGATGTTGTTTGATGATGAT GATAATGATGTTCTAGATGAACTTCCTTTGTTCAATATCCTTGGTGGAGCACAAGATGCCCCTGTCTTAGTGGATGTCGACCTCGGTGAAAATGTTGTTG GTGTAGACCTCGCATTAGGATTGGCTCTCGGTGGACGTCCTGCTTTTTCTGTTGCTGAATTAATCTCTAACCAGGATCCAATGAAGCGTGTCCAGTACGA TTCTGTCCGGTCTAAGGATCTAAGTTCCCCCTCCGGCCCAAGTATTTCCTATCTATCTTCCTTCATGTGGGAGAAGATTGTATTCTCTGATTACTCTGAT GAGGGAGCAGGATTTTATAAAGTATATTCCGACTTGTTCAATTATATTTACTGGAGCGAGTGGAGTTTTTGTAAGAAATCAGGGTTTGGGGTTGATCATT TAAAGGTAGCGCCACCGATGGGGAATTTGGAGAGCCCGTATGCGCAGGTGACTGCTTTTTACAGTTATTGGTTGGGGTTTTCGTCGGTGATGGATTTTTG TTGGGTGGATCCTGCTTACAATCTTATGGTTATGGTTGTTCAAAGCAACTATTTTGAGCGGCAGATGGAGGGGGCTAATGTGAAGAAGAGGGAGAGGGCA AGGACCGAGTTTAACCAGACCGTAAGAGGGTTGGCTAAGTTTGTCCATAAGATGGATAAGAGAGTGAAGAAGAAGGATAAGGAGAAGCTGGAGAAGCTGG AGAAGGAGACTAAGAAGAAGCTGGAGATGAGGGAGAAGAAGAAGAAGATGATGGTTAAAGCCTCTCAAGAACCAACAGATTGTGGATTTATCTTTCGCAA TTATAACTTGGGTCAACATTTTGAGGGAATAGCAATTCCATGTTTGGTATTTAATTGTACTGCATATGCAGGTATAGAAATTCTATAA
AA sequence Show only first row Show all	>Lus10012524 pacid=23143857 polypeptide=Lus10012524 locus=Lus10012524.g ID=Lus10012524.BGIv1.0 annot-version=v1.0 MLSMLFDDDDSAVPDELPLFNVLGGAQDSPVLVDVDLVENVVGVDLALVLAPGERPAFSVAELISNQMNFLCSMFVEHKMPLSEWMSTSVRMLSMLFDDD DNDVLDELPLFNILGGAQDAPVLVDVDLGENVVGVDLALGLALGGRPAFSVAELISNQDPMKRVQYDSVRSKDLSSPSGPSISYLSSFMWEKIVFSDYSD EGAGFYKVYSDLFNYIYWSEWSFCKKSGFGVDHLKVAPPMGNLESPYAQVTAFYSYWLGFSSVMDFCWVDPAYNLMVMVVQSNYFERQMEGANVKKRERA RTEFNQTVRGLAKFVHKMDKRVKKKDKEKLEKLEKETKKKLEMREKKKKMMVKASQEPTDCGFIFRNYNLGQHFEGIAIPCLVFNCTAYAGIEIL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G74250			DNAJ heat shock N-terminal dom...		Lus10012524 [exp]	0	1
AT1G74250			DNAJ heat shock N-terminal dom...		Lus10022344 [exp]	1.0	0.9425
AT4G21870			HSP20-like chaperones superfam...		Lus10007666 [exp]	2.0	0.8595
					Lus10005901 [exp]	2.8	0.8863
AT1G74670		GASA6	GA-stimulated Arabidopsis 6, G...		Lus10002059 [exp]	4.2	0.8463
AT1G47890		AtRLP7	receptor like protein 7 (.1)		Lus10006825 [exp]	4.6	0.8693
AT1G16260			Wall-associated kinase family ...		Lus10009751 [exp]	8.1	0.8025
AT2G14080			Disease resistance protein (TI...		Lus10023330 [exp]	9.6	0.8023
AT5G60200	DOF	TMO6, AtDof5,3	TARGET OF MONOPTEROS 6 (.1)		Lus10022373 [exp]	9.9	0.8276
AT5G36930			Disease resistance protein (TI...		Lus10023329 [exp]	11.8	0.7832
AT5G26170	WRKY	ATWRKY50, WRKY5...	ARABIDOPSIS THALIANA WRKY DNA-...		Lus10006848 [exp]	15.7	0.8421

Compare expression of checked genes

Lus10012524 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.