Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G41120 602 / 0 Esterase/lipase/thioesterase family protein (.1) AT5G41130 579 / 0 Esterase/lipase/thioesterase family protein (.1.2) AT3G02030 569 / 0 transferases, transferring acyl groups other than amino-acyl groups;acyltransferases (.1) AT1G54570 555 / 0 Esterase/lipase/thioesterase family protein (.1) AT3G26840 548 / 0 Esterase/lipase/thioesterase family protein (.1) AT3G26820 459 / 7e-151 Esterase/lipase/thioesterase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041529 [exp] 1238 / 0 AT5G41130 647 / 0.0 Esterase/lipase/thioesterase family protein (.1.2) Lus10018998 [exp] 558 / 0 AT1G54570 824 / 0.0 Esterase/lipase/thioesterase family protein (.1) Lus10033848 [exp] 534 / 2e-178 AT1G54570 770 / 0.0 Esterase/lipase/thioesterase family protein (.1) Lus10041531 [exp] 292 / 7e-93 ND / Lus10041530 [exp] 291 / 1e-92 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G324200 [exp] 763 / 0 AT5G41120 734 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.001G324400 [exp] 739 / 0 AT5G41130 745 / 0.0 Esterase/lipase/thioesterase family protein (.1.2) Potri.001G323800 [exp] 727 / 0 AT5G41130 686 / 0.0 Esterase/lipase/thioesterase family protein (.1.2) Potri.001G324000 [exp] 700 / 0 AT5G41130 688 / 0.0 Esterase/lipase/thioesterase family protein (.1.2) Potri.017G062200 [exp] 690 / 0 AT3G26840 644 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.013G033300 [exp] 592 / 0 AT1G54570 850 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.005G046600 [exp] 591 / 0 AT1G54570 831 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.013G033000 [exp] 582 / 0 AT1G54570 823 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.005G046700 [exp] 577 / 0 AT1G54570 868 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.013G033600 [exp] 571 / 0 AT1G54570 830 / 0.0 Esterase/lipase/thioesterase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF00561 [flax] [poplar] Abhydrolase_1 alpha/beta hydrolase fold
Representative CDS sequence Show only first row Show all	>Lus10012560 pacid=23143875 polypeptide=Lus10012560 locus=Lus10012560.g ID=Lus10012560.BGIv1.0 annot-version=v1.0 ATGATACACCCTTCCTGTATTTCCTTTCCTCTATCTATCTACGACCATGGCGGTCGCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGCCACCG CCGGTGCCTGTTTCTCCACCGCTCGCCGTCCACCGGTTGTGCGTTGCTGCTCCTCTCCACCCGATGATAAGCTGAAGCTGAATCCAGTTCCAGTTCCAAT TCCCAACCGCCGGCTGTACGCTGTCTCCTCCGCTCAGATCGCGGATTCGACTGCCAGCCAAGCAGCAAGGATTCCTTCAACCGTCAATGGAGATTTACGG AAAGGGAGCGACGGAGAGGGAGCTGGAGTTGAAGTAGAAAAGGAGGAGGAGAAGAAGGATATCAATCCCTATGCGTTGGCTGTCCAGAGACCGGAACTAA TACAGTTGGGGAAGAGTCTCAAGGATTACTTCGAGCAGGCGAAGGACTTGATTAAATCGTCTCACCGTGGTCCTCCGCGTTGGATTTCGCCGACGGATTG CGGTTCTGCGCCGGTCAATTCTCCTCTCTTTCTTTATCTTCCTGGGATTGATGGAGTCGGGCTGGGACTCATCCGGTACCACCATGATCTTGCCAAGATG TTCGCTACTCGGTGCTTGCATATACCGGTGATGGATAGGACATCATTTAGAGGGTTAGTACAGTTGGTTGAGAAAACTGTTCGAGAAGAGTATCGCCGTT CTCCAAGGAGGCCCATTTACTTGTGTGGAGAATCTCTTGGAGCTTGTATTGCACTATCCGTTGCAGCTCGCAATCCTGAGGTTGATCTTGTACTTATTCT GGCTAATCCAGCGACTTCTTTTGAGAAATCACAGCTACGAGCTCTAACGCCACTTTTGGAACTCTTGCCTGACAACTTTCAGCTCAACGTTCCTTTCTTG CTCGGCTTAATGACGGAGAACTGCCTCTGCCAAAGAACCCTGCCTCTGCCAAGAGCAACTAGAGGGCTAGAAGTGGATGCGGTTGTAATGCCGTCTTACT TCTCTGTTCTGGTCGAAATCTTACCAAAGGAGACACTTCTTTGGAAGTTACAGTTGCTTGAATCCGCATCATCATACGCCAATGCTCGCCTCCAAGCTGT AAAGGCCCAAACCCTGATTCTCTCTAGTGGAAAGGATCAGTTGTTTCCAAGTATTGAGGAAAGCCAGAGACTACGTTCAGCGCTACCAAAAAGTGACTTT CGGACATTTGATGACAATGGCCATTTCCTTTTCTTGGAAGATGGTCCAAATCTGGTGTCAACAATCAAGGGTTCTATGTTTTATCGCAGAGGAAAATACC GTGATCACATATCAGACTACGTACCACCAACTCCTCTTGAATTCAAGAGAACTGTTGATAAATACAGAGAGTTCAGGGTTGCTACAGGCCCTGTGATGTT ATCAACTATGAATGATGGGAAGATTGTAAAGGGACTTGGTGGAATTCCGTCAGAGGGGCCAGTTTTGATGGTTGGGTATCACATGTTACTGGGGCTAGAG GTGTCGCAATTAGTAACCCAAGTTTTATTTGAACGAAATATTCTGGTGAGAGGAATGGCACATCCTATGATGTTCTCGAGATTAAAGGATGGGAATATGC CTCCCTTGTCATCTTTCGATGATTTTAGGCTGATGGGAGCAGCTCCCGTCACTGGAACTGTTTTATTCAAACTCCTCTCTTCTAAGGCTCATGTGCTTTT GTACCCAGGAGGCATGCGGGAGGCCTGTCACCGTAAGGGTGAGGAATACAAACTATTTTGGCCAGAACATTCAGAATTTGTGAGAATGGCAGCCAGATTT GGAGCCAAAATTGTGCCATTCGGTGTTGTTGGAGAAGACGATTACGGTGAAGTAGTGTTTGATTACAATGATCAAATGAAGATCCCCTTCTGGAGAGACC TTATAAATAACACAACAGAGGAGATACCACAACTGAGGACTGAAGCGGATGGTGAAGTAGCAGTGCAAGGTGTGCATTTCCCGTTCTTCAGACCCAAGTT TCCGGGAAGGTTCTATTACCTCTTTGGGAAGCCAATAGAAACACAAGGAAGGAAAGAAGAGCTAAGCAAAGATAGGGAGAAGGCTCATGAATTGTACTTG GAAGTGAAGCAAGAGGTGTACAATTGCATTGATTACTTGAAGGAGAAGCGACAGGGTGATCCTTACAGGAATGTGGTGGCTCGATTGGCTTACCAAACCA TCCATGGATTTGAATTTGATTCTCCAGTTAAGAAACGTGCAGCTCGGAAATCATCCAAGGTACCACCGAGATGTAACCCAGACCACATCCAGCGGCGCCT CAAAGCCCTTTCTCTAGAGCCCACAATCGTTCAAGATCTGACCGATGCTCTGCAGCAAACTGACGTCTCCAAACTTTTTGAGGAAGGATCATCGGCAGCA GTAGGGACGCAGAAAATCAAAGACAACGTGTGTTGGGGTGATTATGAGCCTCGGGGTATGGTTAGCGATAGCGATGATGATCTTTTTGACGTTTTCCCTA TCTGCGAACCGTTTTTGGATGAGAAGAAGGAAGATCCTTACAAAGGTTCTTGCAAAATGGATCTAAAATTTCTTCCTCTGCCTGACGAAGAGCTCGATTC TATGCCTGACATGAATTGGCATCCCCACGGTAATGGAAAGTCCATGGTTACGGCCCCTGCTGCAAAGGAAGAAGAAGAGGAGGAAGAAGAAGAGCGAGCA GTTCCTCCCGAATATCTACGTATGCTCGAGCTCTTGGAGAGTAGGTATCCAATCTTGAATATGAAGTGA
AA sequence Show only first row Show all	>Lus10012560 pacid=23143875 polypeptide=Lus10012560 locus=Lus10012560.g ID=Lus10012560.BGIv1.0 annot-version=v1.0 MIHPSCISFPLSIYDHGGRPXXXXXXXXXXVATAGACFSTARRPPVVRCCSSPPDDKLKLNPVPVPIPNRRLYAVSSAQIADSTASQAARIPSTVNGDLR KGSDGEGAGVEVEKEEEKKDINPYALAVQRPELIQLGKSLKDYFEQAKDLIKSSHRGPPRWISPTDCGSAPVNSPLFLYLPGIDGVGLGLIRYHHDLAKM FATRCLHIPVMDRTSFRGLVQLVEKTVREEYRRSPRRPIYLCGESLGACIALSVAARNPEVDLVLILANPATSFEKSQLRALTPLLELLPDNFQLNVPFL LGLMTENCLCQRTLPLPRATRGLEVDAVVMPSYFSVLVEILPKETLLWKLQLLESASSYANARLQAVKAQTLILSSGKDQLFPSIEESQRLRSALPKSDF RTFDDNGHFLFLEDGPNLVSTIKGSMFYRRGKYRDHISDYVPPTPLEFKRTVDKYREFRVATGPVMLSTMNDGKIVKGLGGIPSEGPVLMVGYHMLLGLE VSQLVTQVLFERNILVRGMAHPMMFSRLKDGNMPPLSSFDDFRLMGAAPVTGTVLFKLLSSKAHVLLYPGGMREACHRKGEEYKLFWPEHSEFVRMAARF GAKIVPFGVVGEDDYGEVVFDYNDQMKIPFWRDLINNTTEEIPQLRTEADGEVAVQGVHFPFFRPKFPGRFYYLFGKPIETQGRKEELSKDREKAHELYL EVKQEVYNCIDYLKEKRQGDPYRNVVARLAYQTIHGFEFDSPVKKRAARKSSKVPPRCNPDHIQRRLKALSLEPTIVQDLTDALQQTDVSKLFEEGSSAA VGTQKIKDNVCWGDYEPRGMVSDSDDDLFDVFPICEPFLDEKKEDPYKGSCKMDLKFLPLPDEELDSMPDMNWHPHGNGKSMVTAPAAKEEEEEEEEERA VPPEYLRMLELLESRYPILNMK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G41120			Esterase/lipase/thioesterase f...		Lus10012560 [exp]	0	1
AT3G52950			CBS / octicosapeptide/Phox/Bem...		Lus10025698 [exp]	1.4	0.8782
AT5G39360		EDL2	EID1-like 2 (.1)		Lus10042699 [exp]	1.4	0.8621
AT1G55535			unknown protein		Lus10021858 [exp]	3.9	0.8482
AT3G19340			Protein of unknown function (D...		Lus10035127 [exp]	5.5	0.8579
AT3G07890			Ypt/Rab-GAP domain of gyp1p su...		Lus10006410 [exp]	5.7	0.8344
AT2G38560		RDO2, TFIIS	REDUCED DORMANCY 2, transcript...		Lus10022735 [exp]	5.7	0.8332
AT3G61050		AtCLB, NTMCTYPE...	calcium-dependent lipid-bindin...		Lus10041396 [exp]	7.5	0.8370
AT3G19340			Protein of unknown function (D...		Lus10041512 [exp]	8.1	0.8278
AT5G16690		ORC3, ATORC3	origin recognition complex sub...		Lus10034596 [exp]	8.5	0.8326
AT5G59610			Chaperone DnaJ-domain superfam...		Lus10040777 [exp]	8.5	0.8523

Compare expression of checked genes

Lus10012560 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.