Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10012576 pacid=23143823 polypeptide=Lus10012576 locus=Lus10012576.g ID=Lus10012576.BGIv1.0 annot-version=v1.0 ATGGGCTTCGACTCTGTTCTGGCCGGCCCAGCATACAGATTACAATTGAGTGGTCCCACTTACTCTTTTATAAAACGCTCACGTGGGGCCCGTTGCCACC CACCTCCTTCCTCCTATTTGGCAAAAATTTATAGTCGCTGTGGCGTGGTCGTCGTTCGTCGGAAGGAACACAAAATCGATCCTCTTCCTCTTTATTCTTC TCTTTTCAACCTAACATTTTTTCTCCGAACATCAATCTTCCAAATCCCACAGAGCCAGCAGCTACCCAGATTGGACATCATGAGCTACCAGAAGTTCCCA AGCGAGCAGCCGTATCCTCCTCCACCTCCTTCCCAGTCTCCTTATCATGGGAACGAGCCTCCTTACCCGCCGCCGCCGCAGGTCTATCCTCCTCCGTACG AGACTGAGGGGTATCCGCCTCCGCCGCCGCGCCCTGGTGGTTACGCTCCTCCCTATCCGCCACCGCGTCCCCCTCATCAGCACCGATATGATGGCTACCA AGGTTATTTCGCCGGCGCAGCCCAAGGATATCCCCCTCCCCCTCCAGGTCCTCGTAACCAGTATCAGCACTACCATCAGTATGACCACCACCACCATCAC CAGCACCACGACGATTCCGAGGCTTCCTTCCTGCGTGGATGTTTGTTTGCATTGGTGCAGTTTGGCCGGGCTTTGTTGCTGTTGGGTGGTGGATTGCTGC TGCTTCTGAAAGCTTACATCCAGAGATCTGATCAGGCGACTTCTCTGAACATATTGTTAGGAGGTATCCATCTTTCCAAGTACGCCACCAACTCATAA
AA sequence Show only first row Show all	>Lus10012576 pacid=23143823 polypeptide=Lus10012576 locus=Lus10012576.g ID=Lus10012576.BGIv1.0 annot-version=v1.0 MGFDSVLAGPAYRLQLSGPTYSFIKRSRGARCHPPPSSYLAKIYSRCGVVVVRRKEHKIDPLPLYSSLFNLTFFLRTSIFQIPQSQQLPRLDIMSYQKFP SEQPYPPPPPSQSPYHGNEPPYPPPPQVYPPPYETEGYPPPPPRPGGYAPPYPPPRPPHQHRYDGYQGYFAGAAQGYPPPPPGPRNQYQHYHQYDHHHHH QHHDDSEASFLRGCLFALVQFGRALLLLGGGLLLLLKAYIQRSDQATSLNILLGGIHLSKYATNS

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10012576 [exp]	0	1
AT3G16510			Calcium-dependent lipid-bindin...		Lus10006523 [exp]	2.6	0.8213
AT1G43700	bZIP	SUE3, AtbZIP51,...	sulphate utilization efficienc...		Lus10042802 [exp]	4.7	0.7897
AT3G62770		ATATG18A	autophagy 18a, Transducin/WD40...		Lus10036577 [exp]	6.0	0.8181
AT3G19240			Vacuolar import/degradation, V...		Lus10014053 [exp]	6.3	0.7997
AT4G29120			6-phosphogluconate dehydrogena...		Lus10034974 [exp]	8.2	0.8182
AT2G33700			Protein phosphatase 2C family ...		Lus10030731 [exp]	8.8	0.8006
AT4G04860		DER2.2	DERLIN-2.2 (.1)		Lus10020053 [exp]	11.4	0.8040
AT2G24370			Protein kinase protein with ad...		Lus10024212 [exp]	16.8	0.6584
AT3G19450		CAD-C, ATCAD4	CINNAMYL ALCOHOL DEHYDROGENASE...		Lus10019811 [exp]	17.1	0.8128
AT1G13360			unknown protein		Lus10034310 [exp]	18.2	0.7899

Compare expression of checked genes

Lus10012576 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.