Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11000 263 / 2e-81 ATMLO4, MLO4 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) AT5G53760 153 / 1e-40 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT1G26700 147 / 2e-38 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT4G02600 123 / 5e-30 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 118 / 2e-28 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT2G39200 117 / 7e-28 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G61560 116 / 9e-28 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT1G11310 113 / 1e-26 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT3G45290 105 / 4e-24 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT4G24250 102 / 3e-23 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001370 [exp] 550 / 0 AT1G11000 406 / 1e-136 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10015461 [exp] 206 / 9e-64 AT1G11000 200 / 6e-61 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10041893 [exp] 207 / 6e-60 AT1G11000 353 / 1e-114 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10001292 [exp] 149 / 7e-44 AT1G11000 86 / 2e-21 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10036120 [exp] 156 / 2e-41 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10032669 [exp] 152 / 4e-40 AT5G53760 777 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10028440 [exp] 147 / 3e-38 AT1G11000 366 / 9e-120 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10012241 [exp] 140 / 1e-36 AT3G45290 336 / 2e-110 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10043085 [exp] 139 / 1e-35 AT5G53760 776 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G218500 [exp] 283 / 5e-89 AT1G11000 735 / 0.0 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.001G402400 [exp] 158 / 3e-42 AT5G53760 828 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.005G111400 [exp] 157 / 3e-42 AT1G11000 434 / 8e-147 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.011G121600 [exp] 142 / 2e-36 AT5G53760 723 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.007G146900 [exp] 121 / 1e-29 AT4G02600 613 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000900 [exp] 117 / 3e-28 AT4G02600 639 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000800 [exp] 117 / 4e-28 AT4G02600 640 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.011G059200 [exp] 114 / 3e-27 AT2G39200 424 / 2e-143 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 114 / 6e-27 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.011G058900 [exp] 113 / 7e-27 AT1G61560 445 / 2e-151 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10012698 pacid=23148201 polypeptide=Lus10012698 locus=Lus10012698.g ID=Lus10012698.BGIv1.0 annot-version=v1.0 ATGGACGAAGTGTTGATTAGGCAAGGGAGGTCACTAGCTGAAACTCCAACCTACTTTGTGGCCTCAGTTGTTACTGTCCTTGTTTTTGTTTGCTTCATCG GCGAGCGAGCCATTCATCGATTCGGAAAGTGGCTGAAGCAGACCAGGAGGAAGGCTCTGTATGCTTCTCTGGAGAAGATAAAAGAAGAGCTGATGCTGCT GGGGATAATATCATTGTCGTTGGCGCAATGGGCGAGATGGATATCCGAGATTTGCATAAATTCGTCTCTTTTCAGCAGTAAATTCTACATTTGCGCCGAG GAAGATGTTGATGCTGAATCGGTTGCACATTACAATCATCATCATCTCTTGCTCGAAAGTTTGCACAACAATGGTGTTCATCCCAGAGGACTGCCTACTA TTACTACTCACCAGTGCGGTCAGGGTCGGGAACCATTCGTGTCGTTGGAAGGACTGGAGCAGCTTCACCGGTTCTTGTTCGTTCTCGGCATCACTCATGT TCTCTACAGTTGTTTGGCAGTTGGTCTCGCCATGACCAAGATTTACAGTTGGAGAAAATGGGAAAATCAACCCATGATCATGGCCATGGAGGTTAATTCT AATGTCCAAGGTCTTAATATCTACTTCTGGCTCTCATTCATCCCCGCCATTGTAAGTACTAGATTTGGACCGCATTTCACGCTTGTAATGGTGGTGGGAA CGAAGCTCCAGCACGTTGTGTCGATGTTAGCACTTGAGATCGGAGAACAATCAGAGCAGCAGACACCCTCAGTGGGGAACCAAGTGAAGCCCAGAGATGA TTTGTTCTGGTTTGGCAAGCCAGTCATTCTGTTGAGGTTGATTCAGTTCATCATTTTCCAGAATGCCTTTGAGATGGCTACTTTCATCTGGTCCTTGTGG GGTCTGAAGCAAAGAGCCTGCTTCATGAAGAACCATTACATGATCACCTTTCGTTTAGTTTCTGGGGTGGTAGTCCAGTTCTGGTGTAGCCGCAGCACAG TGCCACTAAATGTGCTTGTCACACAGATGGGATCAAGCTGCAGGAAAGCCTTAGTTTCCGAGAGCGTAAGAGACTCACTGCACAGCTGGTGCAAGCGAGT TAAGGAGAGGTCGAAGCGCGAAGCTGCCATGTCGATAGCCACACGATCAGTGTGCTCGATCGACACTGCCACCATCGACGAAGGGGACGAGGACATCACC GTTGCATCTCGCTCCTCCAGGTCCTCGTCCCCGAACCCCCTCAATGAGATCACTGTAGTCGATGAGACCGCCGATGAACAACGAGCTGTGAATGATGATG ATGATCATGATGACCTCTCTAGGAGGATTGAAGAGTACTTTTCGAGTAATGTACCAGTTACAGGTGACGATGAGTGGTTTGACGATGTCGATCATGCACA ACGCAACGAGGGTGAGCAGAAAGTCGAGACCCTATTCGACTTGTTTCGAAATGATCAATCATAG
AA sequence Show only first row Show all	>Lus10012698 pacid=23148201 polypeptide=Lus10012698 locus=Lus10012698.g ID=Lus10012698.BGIv1.0 annot-version=v1.0 MDEVLIRQGRSLAETPTYFVASVVTVLVFVCFIGERAIHRFGKWLKQTRRKALYASLEKIKEELMLLGIISLSLAQWARWISEICINSSLFSSKFYICAE EDVDAESVAHYNHHHLLLESLHNNGVHPRGLPTITTHQCGQGREPFVSLEGLEQLHRFLFVLGITHVLYSCLAVGLAMTKIYSWRKWENQPMIMAMEVNS NVQGLNIYFWLSFIPAIVSTRFGPHFTLVMVVGTKLQHVVSMLALEIGEQSEQQTPSVGNQVKPRDDLFWFGKPVILLRLIQFIIFQNAFEMATFIWSLW GLKQRACFMKNHYMITFRLVSGVVVQFWCSRSTVPLNVLVTQMGSSCRKALVSESVRDSLHSWCKRVKERSKREAAMSIATRSVCSIDTATIDEGDEDIT VASRSSRSSSPNPLNEITVVDETADEQRAVNDDDDHDDLSRRIEEYFSSNVPVTGDDEWFDDVDHAQRNEGEQKVETLFDLFRNDQS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G11000		ATMLO4, MLO4	MILDEW RESISTANCE LOCUS O 4, S...		Lus10012698 [exp]	0	1
AT1G67590			Remorin family protein (.1.2)		Lus10036996 [exp]	4.6	0.7945
AT5G58300			Leucine-rich repeat protein ki...		Lus10003891 [exp]	9.5	0.6798
AT4G01040			Glycosyl hydrolase superfamily...		Lus10005946 [exp]	11.7	0.7229
AT5G41050			Pollen Ole e 1 allergen and ex...		Lus10041541 [exp]	12.0	0.7321
AT5G47520		AtRABA5a	RAB GTPase homolog A5A (.1)		Lus10039051 [exp]	19.9	0.7152
AT1G14310			Haloacid dehalogenase-like hyd...		Lus10037187 [exp]	20.5	0.6495
					Lus10042175 [exp]	22.6	0.6210
AT3G58140			phenylalanyl-tRNA synthetase c...		Lus10028547 [exp]	25.4	0.6514
AT5G50090			unknown protein		Lus10042139 [exp]	25.9	0.6736
AT5G58490			NAD(P)-binding Rossmann-fold s...		Lus10026385 [exp]	27.0	0.6836

Compare expression of checked genes

Lus10012698 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.