Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G23600 147 / 3e-45 ATMES2, ACL, ATME8 ARABIDOPSIS THALIANA METHYL ESTERASE 2, ARABIDOPSIS METHYL ESTERASE 8, acetone-cyanohydrin lyase (.1) AT2G23620 140 / 3e-42 ATMES1 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1) AT3G50440 140 / 6e-42 ATMES10 ARABIDOPSIS THALIANA METHYL ESTERASE 10, methyl esterase 10 (.1) AT2G23590 138 / 2e-41 ATMES8 methyl esterase 8 (.1) AT2G23610 137 / 3e-41 ATMES3 ARABIDOPSIS THALIANA METHYL ESTERASE 3, methyl esterase 3 (.1) AT2G23560 135 / 3e-40 ATMES7 ARABIDOPSIS THALIANA METHYL ESTERASE 7, methyl esterase 7 (.1) AT4G37140 130 / 3e-40 ATMES20, MEE69 MATERNAL EFFECT EMBRYO ARREST 69, ARABIDOPSIS THALIANA METHYL ESTERASE 20, alpha/beta-Hydrolases superfamily protein (.1) AT4G37150 129 / 3e-38 ATMES9 ARABIDOPSIS THALIANA METHYL ESTERASE 9, methyl esterase 9 (.1) AT5G10300 128 / 9e-38 AtHNL, HNL, ATMES5 HYDROXYNITRILE LYASE, ARABIDOPSIS THALIANA METHYL ESTERASE 5, methyl esterase 5 (.1) AT2G23580 125 / 5e-37 ATMES4, ABE4 ARABIDOPSIS THALIANA METHYL ESTERASE 4, ALPHA/BETA FOLD HYDROLASE/ESTERASE 4, methyl esterase 4 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023326 [exp] 152 / 3e-47 AT3G50440 263 / 3e-88 ARABIDOPSIS THALIANA METHYL ESTERASE 10, methyl esterase 10 (.1) Lus10019645 [exp] 144 / 1e-45 AT2G23600 139 / 7e-42 ARABIDOPSIS THALIANA METHYL ESTERASE 2, ARABIDOPSIS METHYL ESTERASE 8, acetone-cyanohydrin lyase (.1) Lus10005402 [exp] 142 / 9e-43 AT2G23580 204 / 3e-65 ARABIDOPSIS THALIANA METHYL ESTERASE 4, ALPHA/BETA FOLD HYDROLASE/ESTERASE 4, methyl esterase 4 (.1.2) Lus10022467 [exp] 141 / 9e-43 AT3G50440 238 / 2e-78 ARABIDOPSIS THALIANA METHYL ESTERASE 10, methyl esterase 10 (.1) Lus10015532 [exp] 138 / 2e-41 AT2G23600 240 / 2e-79 ARABIDOPSIS THALIANA METHYL ESTERASE 2, ARABIDOPSIS METHYL ESTERASE 8, acetone-cyanohydrin lyase (.1) Lus10009203 [exp] 136 / 4e-40 AT2G23620 205 / 6e-65 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1) Lus10005400 [exp] 129 / 4e-38 AT2G23610 206 / 8e-66 ARABIDOPSIS THALIANA METHYL ESTERASE 3, methyl esterase 3 (.1) Lus10009205 [exp] 129 / 4e-38 AT2G23580 194 / 3e-61 ARABIDOPSIS THALIANA METHYL ESTERASE 4, ALPHA/BETA FOLD HYDROLASE/ESTERASE 4, methyl esterase 4 (.1.2) Lus10038592 [exp] 129 / 6e-38 AT2G23620 306 / 4e-105 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G107200 [exp] 146 / 2e-44 AT3G50440 244 / 4e-80 ARABIDOPSIS THALIANA METHYL ESTERASE 10, methyl esterase 10 (.1) Potri.005G133700 [exp] 145 / 2e-44 AT2G23620 277 / 6e-94 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1) Potri.005G133800 [exp] 145 / 2e-44 AT2G23620 270 / 7e-91 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1) Potri.005G133600 [exp] 145 / 2e-44 AT2G23620 274 / 8e-93 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1) Potri.011G082400 [exp] 144 / 5e-44 AT2G23590 254 / 4e-85 methyl esterase 8 (.1) Potri.009G107500 [exp] 144 / 1e-43 AT3G50440 240 / 1e-78 ARABIDOPSIS THALIANA METHYL ESTERASE 10, methyl esterase 10 (.1) Potri.005G133900 [exp] 143 / 1e-43 AT2G23620 251 / 3e-84 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1) Potri.007G036800 [exp] 142 / 1e-42 AT2G23560 230 / 2e-74 ARABIDOPSIS THALIANA METHYL ESTERASE 7, methyl esterase 7 (.1) Potri.007G037100 [exp] 140 / 2e-42 AT2G23620 235 / 1e-77 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1) Potri.007G037700 [exp] 140 / 2e-42 AT2G23620 300 / 6e-103 ARABIDOPSIS THALIANA METHYL ESTERASE 1, methyl esterase 1 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10012854 pacid=23162995 polypeptide=Lus10012854 locus=Lus10012854.g ID=Lus10012854.BGIv1.0 annot-version=v1.0 ATGGAGGAAGTAGGCCACAAGAAGCACTTTGTGTTGGTTCACGGAGCAGCCCACGGAGCATGGTGCTGGTACAAGCTCATCCCGCTCCTGAAATCGAAAG GCCACACGGTCACTGCTCTGGACCTCGGAGCCTCCGGAACGAATCCGAAGCAGCTGCACGAGATCCGGACCGTCTTCGATTATTCGGAGCCGTTGATGGA GTTCATGGCGGCCGTTCCCGAGGATGACAAGGTCATTCTTGTGGCTCATAGCTTCGGTGGCTACATTATTTCTTTGGCTATGGAGAAGTTCCCTCGGAAA GTATTGGTGGCTGTTTATGTTACGGCTGAAATGCCTAGTCTCGTCCATCCGCCTGCCCATCTGAAGATAGAGGGCTAG
AA sequence Show only first row Show all	>Lus10012854 pacid=23162995 polypeptide=Lus10012854 locus=Lus10012854.g ID=Lus10012854.BGIv1.0 annot-version=v1.0 MEEVGHKKHFVLVHGAAHGAWCWYKLIPLLKSKGHTVTALDLGASGTNPKQLHEIRTVFDYSEPLMEFMAAVPEDDKVILVAHSFGGYIISLAMEKFPRK VLVAVYVTAEMPSLVHPPAHLKIEG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G23600		ATMES2, ACL, AT...	ARABIDOPSIS THALIANA METHYL ES...		Lus10012854 [exp]	0	1
AT3G04720		HEL, PR-4, PR4	HEVEIN-LIKE, pathogenesis-rela...		Lus10013728 [exp]	1.0	1.0000
AT4G37330		CYP81D4	"cytochrome P450, family 81, s...		Lus10024817 [exp]	1.4	1.0000
AT2G46150			Late embryogenesis abundant (L...		Lus10027177 [exp]	1.7	1.0000
					Lus10026928 [exp]	2.8	1.0000
AT3G07680			emp24/gp25L/p24 family/GOLD fa...		Lus10006360 [exp]	3.2	0.9881
					Lus10031895 [exp]	3.9	0.9093
					Lus10007677 [exp]	4.0	0.8964
AT5G42905			Polynucleotidyl transferase, r...		Lus10034950 [exp]	4.2	0.9406
AT1G74100		SOT16, ATSOT16,...	CORONATINE INDUCED-7, ARABIDOP...		Lus10018047 [exp]	4.6	0.9699
					Lus10020595 [exp]	4.7	0.9353

Compare expression of checked genes

Lus10012854 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.