Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G16480 466 / 4e-158 MPPALPHA mitochondrial processing peptidase alpha subunit (.1) AT1G51980 457 / 7e-155 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT3G02090 130 / 6e-32 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035000 [exp] 710 / 0 AT1G51980 631 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10025839 [exp] 521 / 1e-179 AT1G51980 643 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10038262 [exp] 521 / 2e-179 AT1G51980 637 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040885 [exp] 122 / 6e-29 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004939 [exp] 122 / 7e-29 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 121 / 1e-28 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004938 [exp] 99 / 2e-22 AT3G02090 546 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G193200 [exp] 562 / 0 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.010G036700 [exp] 561 / 0 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.001G191100 [exp] 518 / 2e-178 AT1G51980 620 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.017G092400 [exp] 120 / 1e-28 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.004G118900 [exp] 117 / 1e-27 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10012926 pacid=23158563 polypeptide=Lus10012926 locus=Lus10012926.g ID=Lus10012926.BGIv1.0 annot-version=v1.0 ATGTACAGAGCCGCAGCTTCTCGCCTCAGGTCTCTCAAGGGACGTACAAGCACTAGGTCACCTGCAAGATATGCAAGCTCCAGTGCTGCAGTGCTGCAGT CATCCTCTTCTGGCGGCCTCTTCAGCTGGCTGACTGGTAGGGGTTCCAACTCTTCAGTGCCTCTAGATTTTCAATATCCTGGAGTCCAGCTCCCACCACC ACTACCTGATCTTGTTGAACCTGGAAAAACCAAGATCACTACTCTCTCTAATGGCGTCAAAATTGCCTCCGAAACATCTCCGAATCCTGCAGCATCAATA GGACTGTACATTGACTGTGGCTCGATATATGAGTCACCAGATACATGTGGAGCCACCCATCTCCTGGAGAGAATGGCCTTTAAAAGTACAAGAAACCGCA GTCATTTGCGTGTAGTGCGAGAAGTGGAAGCAGTTGGGGGTGTTGTGCAAGCCTCAGCATCTCGTGAGCAAATGGGATACACTTTTGATGCTCTGAAGAC TTATGTACCTGAGATGGTGGAGCTGCTAATTGATAGTGTGAGGAACCCTGTCTTCCTAGATTGGGAGGTCAATGAACAGCTTCAGAAGGTGAAATCTGAG ATTAGCGAAGCTTCTAATAATCCACATGGCTTACTCTTGGAAGCAGTTCACTCAGCTGGTTTTTCTGGTGCACTGGCAAATCCTCTTTTAGCTCCAGAAT CTGCAATAAACAGACTGAATGGTACACTCTTGGAGGAGTTTGTCGCTGAAAATTATACTGCCTCACGGATGGTACTTGCGGCTTCTGGTGTTGATCATGA GGAACTGGTATCCATTGCTGAGCCTCTTCTGTCTGACCTACCTGAAATTCCAAGGAACTCTGAGCCTCAATCTGTTTATACTGGAGGTGACTTCCGTTGT CAAGCAGGCTCAGGGACATGTGGAGCCACCCATCTCCTGGAGAGAATGACCTTTAAAAGTACAAGAAACCGCAGCCATTTGCGTGTAGTGCGAGAAGTGG AAGCAGTTGGGGGTGTTGTGCAAGCCTCAGCATCTCGTGAGCAAATGGGATACACTTTTGATGCTCTGAAGACTTATGTACCTGAGATGGTGGAGCTGCT AATTGATAGTGTGAGGAACCCTGTCTTCCTAGATTGGGAGGTCAATGAACAGCTTCAAAAGGTGAAATCTGAGATTAGCGAAGCTTCTAATAATCCACAT GGCTTACTCTTGGAAGCAATTCACTCAGCTGGTTTTTCTGGTGCACTGGCAAATCCTCTTTTAGCTCCAGAATCTGCAATAAACAGACTGAATGGTACAC TCTTGGAGGAGTTTGTCGCTGAAAATTATACTGCCTCACGGATGGTACTTGCGGCTTCTGGTGTTGATCACGAGGAACTTGTATCCATTGCTGAGCCTCT CCTTTCTGACCTACGTGAAATTCCAAGGGACTCTGAGCCTCAATCTATTTATACTGGAGGTGACTTCCGTTGTCAAGCAGGCTCAGGGGATACCCACTTT GCTCTTGCATTTGAATTACCTGGTGGTTGGCATCAGGACAAGGATGCGATGACGTTGACTGTTCTTCAGATGTTAATGGGAGGCGGTGGTTCTTTCTCTA GTGGAGGCCCTGGAAAGGGATTGTACTCAAGACTATATATCAACGTCTTGAGCCAATGTCCACCGATCCAGTCATTCTCAGCGTTCAACAATATTTACAA CGGAACTGCCATATTTGGCATCCAAGCAACCACTACTCCAGATTTTGCGGCAAAAGCAATTGATGTAGCTGTAAGAGAACTGATTGCAGTTGCCACGCCT GGTGAAGTTGACTCTTTGCAATTGGCCCGTGCCAAACAGGCAACAAAATCTGCCATTTTGATGAATTTAGAGTCTCGAATGGTTGCTTCTGAAGACATTG GCAGACAAATTTTGACATATAATGAAAGAAAACCTGTGGAGCATTTCTTGAAAGCCATAGACGGAATTACAGAGCAGGATATTACCAAGGTTGGGCAAAA GCTCCTTTCTTCCCCTCTGACGATGGCTTCATATGGAGATGTTATCAACGTTCCAACTTATGATTATGTGAGTGGCAAGTTCAAGTCGAAGTGA
AA sequence Show only first row Show all	>Lus10012926 pacid=23158563 polypeptide=Lus10012926 locus=Lus10012926.g ID=Lus10012926.BGIv1.0 annot-version=v1.0 MYRAAASRLRSLKGRTSTRSPARYASSSAAVLQSSSSGGLFSWLTGRGSNSSVPLDFQYPGVQLPPPLPDLVEPGKTKITTLSNGVKIASETSPNPAASI GLYIDCGSIYESPDTCGATHLLERMAFKSTRNRSHLRVVREVEAVGGVVQASASREQMGYTFDALKTYVPEMVELLIDSVRNPVFLDWEVNEQLQKVKSE ISEASNNPHGLLLEAVHSAGFSGALANPLLAPESAINRLNGTLLEEFVAENYTASRMVLAASGVDHEELVSIAEPLLSDLPEIPRNSEPQSVYTGGDFRC QAGSGTCGATHLLERMTFKSTRNRSHLRVVREVEAVGGVVQASASREQMGYTFDALKTYVPEMVELLIDSVRNPVFLDWEVNEQLQKVKSEISEASNNPH GLLLEAIHSAGFSGALANPLLAPESAINRLNGTLLEEFVAENYTASRMVLAASGVDHEELVSIAEPLLSDLREIPRDSEPQSIYTGGDFRCQAGSGDTHF ALAFELPGGWHQDKDAMTLTVLQMLMGGGGSFSSGGPGKGLYSRLYINVLSQCPPIQSFSAFNNIYNGTAIFGIQATTTPDFAAKAIDVAVRELIAVATP GEVDSLQLARAKQATKSAILMNLESRMVASEDIGRQILTYNERKPVEHFLKAIDGITEQDITKVGQKLLSSPLTMASYGDVINVPTYDYVSGKFKSK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G16480		MPPALPHA	mitochondrial processing pepti...		Lus10012926 [exp]	0	1
AT5G65750			2-oxoglutarate dehydrogenase, ...		Lus10015205 [exp]	2.2	0.9476
AT4G21150		HAP6	HAPLESS 6, ribophorin II (RPN2...		Lus10022911 [exp]	3.2	0.9475
AT5G19760			Mitochondrial substrate carrie...		Lus10007883 [exp]	3.5	0.9329
AT3G05530		ATS6A.2, RPT5A	regulatory particle triple-A A...		Lus10031492 [exp]	4.2	0.9314
AT5G02970			alpha/beta-Hydrolases superfam...		Lus10019914 [exp]	5.0	0.9011
AT3G02090		MPPBETA	Insulinase (Peptidase family M...		Lus10004937 [exp]	6.3	0.9326
AT2G41490		GPT	UDP-glcnac-adolichol phosphate...		Lus10012300 [exp]	7.2	0.9194
AT1G10950		AtTMN1	transmembrane nine 1 (.1)		Lus10001368 [exp]	10.6	0.9178
AT2G01720			Ribophorin I (.1)		Lus10040410 [exp]	10.8	0.9349
AT5G63840		PSL5, RSW3	RADIAL SWELLING 3, PRIORITY IN...		Lus10020887 [exp]	11.5	0.9309

Compare expression of checked genes

Lus10012926 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.