Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G13080 1412 / 0 EST2, ATMRP3, ABCC3 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) AT3G13100 1304 / 0 ATMRP7, ABCC7 ATP-binding cassette C7, multidrug resistance-associated protein 7 (.1) AT3G13090 1291 / 0 ATMRP8, ATABCC6 ATP-binding cassette C6, multidrug resistance-associated protein 8 (.1) AT1G04120 1112 / 0 ATABCC5, ABCC5, ATMRP5 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) AT3G60160 1065 / 0 ATMRP9, ABCC9 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) AT3G60970 1051 / 0 ATMRP15, ABCC15 ATP-binding cassette C15, multidrug resistance-associated protein 15 (.1) AT3G62700 880 / 0 ATMRP10, ABCC14 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) AT2G47800 872 / 0 EST3, ATMRP4, ABCC4 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) AT3G59140 850 / 0 ATMRP14, ABCC10 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) AT3G21250 822 / 0 ATMRP6, ABCC8 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10030716 [exp] 1470 / 0 AT3G13080 1256 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Lus10022858 [exp] 1105 / 0 AT1G04120 2341 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10024965 [exp] 1104 / 0 AT1G04120 2176 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10042023 [exp] 1090 / 0 AT3G60160 1869 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10018027 [exp] 1089 / 0 AT3G60160 1863 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10030718 [exp] 974 / 0 AT3G13080 1249 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Lus10027567 [exp] 867 / 0 AT3G59140 2001 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Lus10023139 [exp] 863 / 0 AT3G62700 1659 / 0.0 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) Lus10039320 [exp] 863 / 0 AT3G59140 1991 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G362300 [exp] 1529 / 0 AT3G13080 2008 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.001G362200 [exp] 1465 / 0 AT3G13080 1952 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G198401 [exp] 1420 / 0 AT3G13080 1827 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T125806 [exp] 1419 / 0 AT3G13080 1826 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T124506 [exp] 1412 / 0 AT3G13080 1847 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G197200 [exp] 1411 / 0 AT3G13080 1832 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T124606 [exp] 1411 / 0 AT3G13080 1830 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G197101 [exp] 1410 / 0 AT3G13080 1862 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.T124406 [exp] 1402 / 0 AT3G13080 1847 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.003G197100 [exp] 1395 / 0 AT3G13080 1842 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0619 [flax] [poplar] Mog1p_PsbP PF01789 [flax] [poplar] PsbP PsbP CL0241 [flax] [poplar] ABC_membrane PF00664 [flax] [poplar] ABC_membrane ABC transporter transmembrane region CL0023 [flax] [poplar] P-loop_NTPase PF00005 [flax] [poplar] ABC_tran ABC transporter
Representative CDS sequence Show only first row Show all	>Lus10013201 pacid=23166652 polypeptide=Lus10013201 locus=Lus10013201.g ID=Lus10013201.BGIv1.0 annot-version=v1.0 ATGTCAGCAACACAAGCAGAAAGCAAAGTCTCATTGTCTGCTCCGGACAGCAACAACAACCAGAAGAAGCACAAGCATCCATATTTCCAGGTTTACAAGG ACGATGCCAACAAGTTCCAGATATCAATCCCACAGGACTGGCAAGTAGCTACAGGAGAGCCCAATGGTTTCAAGTCTGTGACTGCTTTCTACCCAGAAGA ACAATCTTCCGCTACTACAAACGTCAGCGTGGTCATCACAGGTCTTGGCCCTGATTTCACAAAGATGGAGTCTTTTGGAAAGGTTGAAGCTTTCGCTGAG ACTCTGGTGGGTGGGCTGGATAGAAGCTGGCAAAAGCCACCTGGTGTGGCAGCAAAACTGATTGACTGTAAAGCTTCAAAAGGGTTGTACTACATCGAGT ACTCGCTCCAAAATCCGGGCGAGAGTCAGAAACATTTGTACACCGCGCTTGGGATGGCTACCAATGGCTGGTACAACCGGCTCTACACCGTCACCGGCAC GTTTGTGGATGAAGAATCTTCTCAGTCTTACGGCTCCAATATTCAAAAGAAGATCATTGAGCTAAGGAAGACTGAAGCAGGATGGTTGAAAAGATACGTT TACTCTTCAGCTTTGATTAGTTTCGTCTTCTGGGGCGCCCCTACATTTGTCTCTGTAGCTACTTTCGGTACATGTATGCTTTTAGGGATCCCACTCGAGT CCGGCAAGATCTTATCAGCACTTGCAACTTTCAGGGTTCTTCAAGAGCCAATCTACAATCTCCCTGACACCATTTCCATGTTGGTTCAGATGAAAGTCTC GCTCGACAGGATTGTATCGTTCTTGCGTCTCGATGACTTGCCGGATGATGTGGTGAAGAGTATTCCTAGAGAAGCTTCTAATACTGCTATTGAGATAGTT GATGGGGCTTTCTCATGGGATTCTTCTTTACCAAACCCCACTTTACGAGATATTAATCTCAAGGTGTTGTGTGGAATGAAGGTTGCTGTTTGTGGAACTG TCGGTTCGGGGAAATCGAGTTTGCTCTCGTGTATTCTCGGAGAGGTACCGAAGATCTCTGGCACGGTCGAGCTGTGTGGGACAAAGGCTTACGTTGCTCA GTCGCCTTGGATACAGAGTGGCAAGATTCAAGAGAACATTTTATTTGGGCAAGAGATGGATAAAGATAAGTATGATAAGGTACTTGAAGCTTGTGCACTG AAGAAAGACTTGGAGATATTTTCGTTTGGTGATCAAACGGGGATTGGTGAGAGAGGTATCAATTTGAGTGGTGGACAGAAGCAGAGAATTCAGATTGCTC GTGCTCTCTACCAAGATGCTGATATCTACCTCTTTGATGATCCCTTTAGTGCTGTGGATGCTCATACTGGCTCTCACTTGTTTAAGGAAGTCTTGCTTGG TCATTTAGGTTCCAAAACTGTGGTGTACGTCACTCATCAAATTGAATTCTTACCTGTAGCAGATATAATTTTGGTGATGAAAGATGGGAGGATAACACAG GCGGGAAGGTACAGTGATATTCTAAGTTCAGGATCTGATTTCATGGAACTTGTTGGTGCACATAAGGCAGCTTTGTCAGCTATAGATTCTTCGAAGGCAG CTTCAGAATCGGAGAATGGAAATATCAGTAAGGGAAATGATGACGACATGATGAGTAGTAACAGTATCGAGACAAAAGATGGTAAAGCGGATGATGACAC AAAAGATGGTGAAGTGAAGGGGCAGCTTGTTCAAGAAGAAGAGAGAGAGAAAGGAAGGGTTGGGTTTACAGTGTACTGGCAGTATCTCATAACAGCATAT GGTGGAGCTCTTGCACCCCTTGCAGTGCTCGCGCATGGAATGTTTCAGGTCCTCCAAATCGGGAGCAATTATTGGATGGCTTGGGCAACTCCAGTATCAG AGGATGAAGAGCCTCCTGTTCCTCCGGTGACACTGATAGCTGTGTATGTGATTTTGGCTGTTGTTAGCTCTCTATGCATCCTAGCCAGATCCACACTTCT CGCAGCGATTGCGTACAAAACCGCTACTCTGCTCTTCAACAAGATGCATTTGAGCATTTTCCGTGCTCCCATGTCGTTTTTCGACTCTACTCCCAGTGGA CGAATACTCAATCGTGCTTCTACGGACCAAAGTGCAGTTGATCAACAAATTCCATACCAACTTGGGTCAGTTGCCTTTGCAATCATCCAGCTTTTGGGAA TCATTGCAGTTATGTCTCAGGTGGCTTGGCAAGTTTTCATTGTATGCGTTCCTGTCATTGCTATCAGCGTCTGGTATCAGCAATACTATATACCAGCAGC AAGAGAACTTTCAAGGTTGGTTGGAGTTTGCAAAGCTCCGCTAATCCAGCATTTTGCTGAAACGATATCAGGAACAACAACTATAAGGAGTTTTGATCAA CAACCAAGATTCCAACATACTTCTATGGAACTTACAGATGCATATTCCCGCCCCAAGTTTCACTCTGCTGGTGCAATGGAATGGCTTTGCGTCCGCCTCG ACTTTTTCTCTTCGATCACATTCGCCTTCTGTTTGTTCTTCTTAATCTCCTTCCCTGGGATTAATCCATCTCTTGCTGGTTTAGCGGTGACATATGGGCT AAATCTAAACATGATCCAAGCATGGGTGATATGGAATCTTTGTAATGTGGAGAACAAGATCATATCAGTGGAGAGAATTCTTCAGTATATATCTATTCCG AGTGAGCCTCCTCTTGTTATAGAAGAGACAAGACCACATCTTTCTTGGCCGTCACTTGGAGAAGTTGATATTGATGGCTTGGAAGTCCGATATGCCCCTC ACTTGCCACTTGTGCTTAGAGGCTTTACCTGCACGTTTGAAGGAGGAAAGAAAACAGGAATTGTGGGGAGAACGGGTAGTGGTAAATCAACTCTTATTCA GACATTGTTTAGGATTGTCGATCCAACAGCCGGGAAGATTACCATTGATGGCATTGACATCTCATCGATCGGACTCCACGATTTGCGTTCTAGACTCAGC ATTATTCCTCAAGACCCTACCATGTTTGAAGGCACTGTAAGAAGCAACCTAGACCCTCTTGAGGAATACTCTGATGAACAGATTTGGGAGGCTCTAGATA AATGCCAACTTGGAGAAGAAGTTAGGAAGAAGGAGAAAAAGTTGGACTCTTCAGTTACTGAGAATGGAGAGAACTGGAGCATGGGGCAGAGACAGCTGGT ATGCCTCGGCCGAGTTCTGCTGAAAAAGAGCAAAGTTTTGGTGCTGGATGAAGCTACTGCTTCTGTAGATACAGCTACAGATAATCTGATCCAGGAAACT CTCAGACAACACTTCTTTGACTGCACAGTTATCACAATTGCACATAGAATAACATCTGTTCTTGACAGCGACATGGTTCTTCTACTAAGTCATGGGCTTA TTGAAGAATATGATACTCCAGTGAGATTGTTGGAGAACAAGTCATCCTCGTTTGCACAACTTGTAGCTGAGTACAGTGAGAGATCCAAAGAACAGGACAA TAACGCAGTAGTTCGGAGAAGCAGAACATTAACTAAAAGTAAAAACGAACGTGTGGGGGGCGTACTCTGTAAGTTGTGGTGCAGTCCTCGTCAACAAACA CTTCAATGGTGCTTCCAGTTGCTGATGCTCTTCCAACCAATGAACCAGGTTTCTGTGGGATCTGGAGATTATCACAATCTCTGA
AA sequence Show only first row Show all	>Lus10013201 pacid=23166652 polypeptide=Lus10013201 locus=Lus10013201.g ID=Lus10013201.BGIv1.0 annot-version=v1.0 MSATQAESKVSLSAPDSNNNQKKHKHPYFQVYKDDANKFQISIPQDWQVATGEPNGFKSVTAFYPEEQSSATTNVSVVITGLGPDFTKMESFGKVEAFAE TLVGGLDRSWQKPPGVAAKLIDCKASKGLYYIEYSLQNPGESQKHLYTALGMATNGWYNRLYTVTGTFVDEESSQSYGSNIQKKIIELRKTEAGWLKRYV YSSALISFVFWGAPTFVSVATFGTCMLLGIPLESGKILSALATFRVLQEPIYNLPDTISMLVQMKVSLDRIVSFLRLDDLPDDVVKSIPREASNTAIEIV DGAFSWDSSLPNPTLRDINLKVLCGMKVAVCGTVGSGKSSLLSCILGEVPKISGTVELCGTKAYVAQSPWIQSGKIQENILFGQEMDKDKYDKVLEACAL KKDLEIFSFGDQTGIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGHLGSKTVVYVTHQIEFLPVADIILVMKDGRITQ AGRYSDILSSGSDFMELVGAHKAALSAIDSSKAASESENGNISKGNDDDMMSSNSIETKDGKADDDTKDGEVKGQLVQEEEREKGRVGFTVYWQYLITAY GGALAPLAVLAHGMFQVLQIGSNYWMAWATPVSEDEEPPVPPVTLIAVYVILAVVSSLCILARSTLLAAIAYKTATLLFNKMHLSIFRAPMSFFDSTPSG RILNRASTDQSAVDQQIPYQLGSVAFAIIQLLGIIAVMSQVAWQVFIVCVPVIAISVWYQQYYIPAARELSRLVGVCKAPLIQHFAETISGTTTIRSFDQ QPRFQHTSMELTDAYSRPKFHSAGAMEWLCVRLDFFSSITFAFCLFFLISFPGINPSLAGLAVTYGLNLNMIQAWVIWNLCNVENKIISVERILQYISIP SEPPLVIEETRPHLSWPSLGEVDIDGLEVRYAPHLPLVLRGFTCTFEGGKKTGIVGRTGSGKSTLIQTLFRIVDPTAGKITIDGIDISSIGLHDLRSRLS IIPQDPTMFEGTVRSNLDPLEEYSDEQIWEALDKCQLGEEVRKKEKKLDSSVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQET LRQHFFDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDTPVRLLENKSSSFAQLVAEYSERSKEQDNNAVVRRSRTLTKSKNERVGGVLCKLWCSPRQQT LQWCFQLLMLFQPMNQVSVGSGDYHNL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G13080		EST2, ATMRP3, A...	MULTIDRUG RESISTANCE PROTEIN 3...		Lus10013201 [exp]	0	1
AT3G13080		EST2, ATMRP3, A...	MULTIDRUG RESISTANCE PROTEIN 3...		Lus10030718 [exp]	1.0	0.8795
AT3G50930		BCS1	cytochrome BC1 synthesis (.1)		Lus10041918 [exp]	1.4	0.8649
AT4G21390		B120	S-locus lectin protein kinase ...		Lus10009631 [exp]	3.2	0.7992
AT4G24040		TREHALASE1, ATT...	trehalase 1 (.1)		Lus10023034 [exp]	4.2	0.7959
AT3G50930		BCS1	cytochrome BC1 synthesis (.1)		Lus10028463 [exp]	4.6	0.8295
AT3G26470			Powdery mildew resistance prot...		Lus10021768 [exp]	12.5	0.7183
					Lus10006569 [exp]	13.4	0.7493
AT4G13780			methionine--tRNA ligase, putat...		Lus10010450 [exp]	14.1	0.7544
AT4G33300		ADR1-L1	ADR1-like 1 (.1.2)		Lus10021769 [exp]	15.4	0.7397
AT2G19130			S-locus lectin protein kinase ...		Lus10024348 [exp]	15.6	0.7539

Compare expression of checked genes

Lus10013201 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.