Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G42560 536 / 0 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT2G33670 499 / 3e-173 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT2G17480 446 / 3e-151 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT2G17430 436 / 3e-148 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT5G65970 435 / 3e-147 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT1G61560 355 / 7e-117 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT1G11310 345 / 4e-112 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT2G39200 344 / 6e-112 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT3G45290 338 / 2e-110 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT2G44110 294 / 1e-93 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10030729 [exp] 841 / 0 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 468 / 2e-159 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 451 / 5e-153 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10040388 [exp] 362 / 4e-118 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10041410 [exp] 361 / 6e-118 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 359 / 4e-117 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10023506 [exp] 354 / 1e-114 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10036120 [exp] 312 / 1e-99 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036121 [exp] 308 / 2e-98 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G006700 [exp] 504 / 8e-175 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 458 / 2e-156 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.005G099200 [exp] 455 / 6e-155 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.009G011900 [exp] 389 / 5e-129 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 374 / 2e-123 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 357 / 8e-117 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.002G007000 [exp] 351 / 1e-114 AT1G11310 448 / 7e-152 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.016G088000 [exp] 345 / 2e-113 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.005G254300 [exp] 338 / 1e-109 AT1G11310 461 / 3e-157 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.010G220500 [exp] 334 / 7e-108 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10013211 pacid=23166634 polypeptide=Lus10013211 locus=Lus10013211.g ID=Lus10013211.BGIv1.0 annot-version=v1.0 ATGGGAGGAGGCGGCGGCGAAGGCGGAGGAGTAGCAGCCAGCCCTAGGGAGCTCGACGCCACACCCACATGGGCCGTCGCTGTTGTTTGCGCTGCCATCA TTCTCATCTCCATCATCTTGGAAAAATTCCTTCATCTCACAGAAGAATGGTTCCATGAAAGACACAAGAAAGCTCTGGTTGAAGCTCTGGAGAAAATCAA AGCAGAGCTTATGGTTTTGGGGTTCATATCGTTGACGCTGACGTTTAGTCAGAATTACATCGCCCAAATCTGCGTCCCTTCTAGGTATACCAACGTTATG TTGCCATGCGCTCAAGGTGGTGGGGATCACGGTGGAGGCGGTGGTGGTGATCACGGCGGCGGAGGGGATCATGGTGGCGGTGGTGGTGAAGGGGATCACG GCGGAGGCGGTGCTGAGGACGGCGTCGCTGCTGCCGCAGCAGCGTTATCAACAGACCACCACCGGAGGCTCCTCTTTTTCGAGCGTAGATTCCTTGGTGG CCATGGAGGACCCGTACACTGTGCCGAGGGGAAATCGCCGATGATTTCTGTGAATGGATTGCATCAGTTGCATATATTCATATTTTTCCTGGCAGTTTTT CATGTTTTCTACAGTGCCATAACCATGATGCTTGGACGATTAAAGATTCGTGGGTGGAAGGAGTGGGAGGTTGAGGGTGCTAAGCAACATGAGCAGTTAA ATGACCCAACAAGGTTCAGGCTTACTCATGAGACGTCCTTTGTGAAATCCCATACTAGTTTCTGGAATAAAACACCAGTGTCTTTCTACATTGTATGCTT CTTTAGACAATTCTTTAGATCTGTGAGTAAAGCTGACTACTTGACAATGCGCCATGGCTTCATCTCTGTTCATTTAGCACCTGGAAGCAAGTTTGATTTC CAGAAGTACATCAAAAGATCTCTGGAAGATGATTTCAAGGTCGTTGTGGGAATCAGTCCATTGCTGTGGGCTTCTGTGGTGTTCTTCATGCTTTTGAATG TTCATGGGTGGCATGTGATGTTCCCTCTGTCCTTGCTGCCACTAGTTGTAATATTAGCAGTTGGAACAAAGCTTCAGTCGATCATAACAGAGATGGCAAT TGAAATCACAGAAAGGCATGCTGTGGTACAAGGGATACCCCTTGTGCAAGTCACTGACAGACATTTCTGGTTCAGTTGGCCACAGTTGATCCTCTACCTC ATCCACTTTGTGCTCTTTCAGAATGCGTTTGAGCTTACCTATTCCTTTTGGATATGGTACGAGTTTGGCATGGATTCTTGTTTCCATGAGCACCATCTGA TTCCACTGTTGAGAATGGCTGTAGGGGTAGGAGCCCAATTCCTTTGCAGCTACATCACGCTTCCGTTGTATGCCCTTGTCACTCAGATGGGTTCGACGAT GAAACGATCGATCTTTGACGAGCAAACATCCAAGGCGTTGATGCAGTGGCACAAGAAGGCACACAAGAAGGCGCAACACGACGAGTCGCATCACGACGAC CACTCCCCTGCTCCGCACCATGGCGAAAAGGACGGAGCAGCGTCGGCCAACATCATGGCCACCGTTGATATCAACAGTGGTGGACAGCAGGAACAACAAA ACTATGCTCAACGTGATCTTTTGAGTTAG
AA sequence Show only first row Show all	>Lus10013211 pacid=23166634 polypeptide=Lus10013211 locus=Lus10013211.g ID=Lus10013211.BGIv1.0 annot-version=v1.0 MGGGGGEGGGVAASPRELDATPTWAVAVVCAAIILISIILEKFLHLTEEWFHERHKKALVEALEKIKAELMVLGFISLTLTFSQNYIAQICVPSRYTNVM LPCAQGGGDHGGGGGGDHGGGGDHGGGGGEGDHGGGGAEDGVAAAAAALSTDHHRRLLFFERRFLGGHGGPVHCAEGKSPMISVNGLHQLHIFIFFLAVF HVFYSAITMMLGRLKIRGWKEWEVEGAKQHEQLNDPTRFRLTHETSFVKSHTSFWNKTPVSFYIVCFFRQFFRSVSKADYLTMRHGFISVHLAPGSKFDF QKYIKRSLEDDFKVVVGISPLLWASVVFFMLLNVHGWHVMFPLSLLPLVVILAVGTKLQSIITEMAIEITERHAVVQGIPLVQVTDRHFWFSWPQLILYL IHFVLFQNAFELTYSFWIWYEFGMDSCFHEHHLIPLLRMAVGVGAQFLCSYITLPLYALVTQMGSTMKRSIFDEQTSKALMQWHKKAHKKAQHDESHHDD HSPAPHHGEKDGAASANIMATVDINSGGQQEQQNYAQRDLLS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G33670		ATMLO5, MLO5	MILDEW RESISTANCE LOCUS O 5, S...		Lus10013211 [exp]	0	1
					Lus10014982 [exp]	21.8	0.7426
AT5G59340	HD	WOX2	WUSCHEL related homeobox 2 (.1...		Lus10016569 [exp]	27.4	0.7654
					Lus10027563 [exp]	28.4	0.7644
AT5G20630		ATGER3, GLP3A, ...	GERMIN-LIKE PROTEIN 3, ARABIDO...		Lus10037662 [exp]	29.5	0.7720
					Lus10003448 [exp]	76.0	0.6824
AT2G30710			Ypt/Rab-GAP domain of gyp1p su...		Lus10027046 [exp]	80.5	0.6564
AT3G18670			Ankyrin repeat family protein ...		Lus10019888 [exp]	88.1	0.7065
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10014241 [exp]	89.2	0.7215
					Lus10010418 [exp]	107.7	0.6341
AT1G31690			Copper amine oxidase family pr...		Lus10041208 [exp]	140.2	0.6508

Compare expression of checked genes

Lus10013211 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.