Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27570 144 / 1e-41 UDP-Glycosyltransferase superfamily protein (.1) AT5G54060 142 / 7e-41 UF3GT UDP-glucose:flavonoid 3-o-glucosyltransferase (.1) AT1G64920 139 / 5e-40 UDP-Glycosyltransferase superfamily protein (.1) AT1G50580 137 / 3e-39 UDP-Glycosyltransferase superfamily protein (.1) AT4G27560 137 / 7e-39 UDP-Glycosyltransferase superfamily protein (.1) AT4G09500 135 / 1e-38 UDP-Glycosyltransferase superfamily protein (.1.2) AT5G53990 134 / 9e-38 UDP-Glycosyltransferase superfamily protein (.1) AT5G54010 130 / 2e-36 UDP-Glycosyltransferase superfamily protein (.1) AT2G22930 129 / 3e-36 UDP-Glycosyltransferase superfamily protein (.1) AT1G64910 121 / 5e-33 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10008453 [exp] 258 / 2e-85 AT5G54010 539 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10013337 [exp] 144 / 2e-41 AT5G54010 452 / 1e-156 UDP-Glycosyltransferase superfamily protein (.1) Lus10004381 [exp] 120 / 1e-32 AT5G54060 437 / 1e-150 UDP-glucose:flavonoid 3-o-glucosyltransferase (.1) Lus10040178 [exp] 112 / 9e-30 AT5G54010 437 / 7e-151 UDP-Glycosyltransferase superfamily protein (.1) Lus10039237 [exp] 90 / 7e-22 AT5G54010 240 / 5e-76 UDP-Glycosyltransferase superfamily protein (.1) Lus10012726 [exp] 90 / 1e-21 AT2G22590 471 / 3e-164 UDP-Glycosyltransferase superfamily protein (.1) Lus10003154 [exp] 83 / 5e-19 AT5G54010 318 / 3e-104 UDP-Glycosyltransferase superfamily protein (.1) Lus10026412 [exp] 77 / 2e-18 AT2G22590 173 / 1e-52 UDP-Glycosyltransferase superfamily protein (.1) Lus10042241 [exp] 76 / 4e-18 AT5G65550 168 / 4e-51 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G097900 [exp] 170 / 1e-51 AT5G54010 498 / 1e-174 UDP-Glycosyltransferase superfamily protein (.1) Potri.011G061000 [exp] 128 / 1e-35 AT5G54010 468 / 6e-163 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G041900 [exp] 105 / 1e-27 AT5G54010 348 / 1e-116 UDP-Glycosyltransferase superfamily protein (.1) Potri.012G034100 [exp] 82 / 5e-19 AT2G22590 505 / 2e-177 UDP-Glycosyltransferase superfamily protein (.1) Potri.010G182575 [exp] 82 / 6e-19 AT5G49690 468 / 7e-163 UDP-Glycosyltransferase superfamily protein (.1) Potri.006G179700 [exp] 75 / 3e-16 AT5G54010 349 / 2e-116 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G042800 [exp] 74 / 7e-16 AT5G49690 377 / 3e-127 UDP-Glycosyltransferase superfamily protein (.1) Potri.002G162300 [exp] 72 / 2e-15 AT2G22590 372 / 6e-125 UDP-Glycosyltransferase superfamily protein (.1) Potri.003G184400 [exp] 69 / 3e-14 AT5G49690 549 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G030600 [exp] 68 / 6e-14 AT2G22590 537 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10013367 pacid=23151352 polypeptide=Lus10013367 locus=Lus10013367.g ID=Lus10013367.BGIv1.0 annot-version=v1.0 ATGGCTTCCGAAACCAAAAAATTCCACATAGTGATGTTCCCATGGCTAGCAACTGGTCACATCACCCCATTCCTTCACCTCTCCAACACCCTAGCTAGCA AAGGCTTCACCATCACATTCATCCTCCCCCAAAAGTCAATCCAACAATTCTCCGTGTTCAACCAACACCCGGATCTCATTGATTTCTACCCCATCGTGCT CTCTCCCGTCGATAGCCTCCCCGCCGGAGTGGAGACCGCCTCTGAGGTCCCTATTGAGGTCACCCACTTTTTGTGCATTGCCATGGATCGAACTCGAGAT CAGGTGGAAAAAATTATCCGTGGAACCAACCCTAAGGTAGTGGAGTATGACATGACACATTGGGTGTTTGACATCACTGCCTCGTTGGGGATAAAGAGCG TGAACTACACGTCCTCTCTGCATCTGTCGTTGCCTTTGCGGATGTTCCCACGCGTGGAATTGTGA
AA sequence Show only first row Show all	>Lus10013367 pacid=23151352 polypeptide=Lus10013367 locus=Lus10013367.g ID=Lus10013367.BGIv1.0 annot-version=v1.0 MASETKKFHIVMFPWLATGHITPFLHLSNTLASKGFTITFILPQKSIQQFSVFNQHPDLIDFYPIVLSPVDSLPAGVETASEVPIEVTHFLCIAMDRTRD QVEKIIRGTNPKVVEYDMTHWVFDITASLGIKSVNYTSSLHLSLPLRMFPRVEL

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G27570			UDP-Glycosyltransferase superf...		Lus10013367 [exp]	0	1
AT3G12750		ZIP1	zinc transporter 1 precursor (...		Lus10014062 [exp]	2.8	0.9945
					Lus10029261 [exp]	4.0	0.9945
AT4G27420		ABCG9	ATP-binding cassette G9, ABC-2...		Lus10025597 [exp]	4.5	0.9453
AT5G01660			unknown protein		Lus10040599 [exp]	4.9	0.9945
AT1G44100		AAP5	amino acid permease 5 (.1)		Lus10042742 [exp]	5.2	0.9054
					Lus10038051 [exp]	5.7	0.9945
					Lus10003825 [exp]	6.3	0.9945
AT5G56990			unknown protein		Lus10029528 [exp]	6.9	0.9945
AT2G47430		CKI1	CYTOKININ-INDEPENDENT 1, Signa...		Lus10035114 [exp]	7.4	0.7743
AT4G27420		ABCG9	ATP-binding cassette G9, ABC-2...		Lus10029635 [exp]	7.5	0.9945

Compare expression of checked genes

Lus10013367 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.