Plant FIBer expression Database

Lus10013485 [FLAX]


External link
JGI Phytozome v13
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G57600 749 / 0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10007951
[exp]
1019 / 0 AT1G57600 762 / 0.0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Poplar homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.013G000600
[exp]
828 / 0 AT1G57600 740 / 0.0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0517 MBOAT-like PF03062 MBOAT MBOAT, membrane-bound O-acyltransferase family
Representative CDS sequence
>Lus10013485 pacid=23155119 polypeptide=Lus10013485 locus=Lus10013485.g ID=Lus10013485.BGIv1.0 annot-version=v1.0
ATGGACCAAACCAGTAATTTAACTGGATCAATTTCTTACATCGTCAGCGAGAAGAAGAAGAAGTTGGGAGAAATCGGAGAAGGTTTGCTGCATCATAGAT
TCATAGTCGTCGGAGCAACCATTATCGTTCTTACCTTGTCGGCGGAGCTACGACGGAGTCTCTCAGCATTTCCGATTGCAGCAGATACAGGTTCGCTTGT
GTTCGCGCCATTCCCGTTGATTCCAGCTGACTGTTTCCAACGAGTGGGGTGGAGAAGGATAGAGATTGCTTTCCTGCTTCTCTATGCTATTGCTTTCTAC
GTTTACATCATCCATCGATCTATTCAACTCGCTCAGGAACACAAGTCAAAGCTTTATGGGTTTCGCCCTGGCTGGCTGTTTCCTCCTCGTCTTAATGATC
TCTCTGATGCCCAATGGAGAAATTTTCGTGGAAATCTACCAGTTCTGACTGCTGTTTTTGCAATTTTTGCTGTCCTAGCCAATTCATTGAAGGCTTTTAT
GTCTTTAAGAGCTAAGGGAATGTCAATTACCTGGCTTTTGATTTCTTTGGCCTACTTATCATACCTTCATGGAGCTTGCACCTTCTATATCTTATTAATA
GCTTCTGCGAATTTTATCATTGTAATGATGTTTGCACGGACAAAGTATTTCTCACCTGCCATTTGGATATTCAACCTATCTGTTCTTCTTTCTAACCGAC
TTTACGAGGGGTATCCATTCTCCATGTTTGGGGAACAGTGGGCATACTTAGATAACTTCCGAGGCACGTTCAGATGGCATATTTGCTTTAACTTTGTTAT
TTTGCGCATGGTCAGCTTCGGATATGACTATCATTGGGCTAATCAAGAGTCTCGTTTTGATCAGGAGAAGCACATTCAGCGTTGCCATAGTTGTAAGTCA
GGAACAATGTGCTACCAATTGCTACAGGAGAGAAGTGTGCAAATTGATAAGTTTTCCTTTACCATATACTTGTCTTATTTGGTGTATGCCCCCCTTTACC
TTGCTGGGCCAATTGTAAGCTTCAACGCCTTTGCTTCACAGTTAGACATGCCAGTACGGACTTTTGCTACAAGAAATGTCTTCTGGTATGGATTACGGTG
GATATTCAGCTTCATTATCATAGAAGTCGTCACCCATTTTTTCCATTACAATGCATTTGCAGTCAGTGGCATCTGGAAGCTGCTGTCGCCTATGGATATT
TTCATAATTGGATATGGGGTCTTGAACTTTATGTGGCTGAAGTTTTCCCTCATATGGCGCTATTTTCGGCTTTGGTCACTGATTAATGGCATAGAGGCTC
CTGAGAATATGCCCAAGTGCATCAATAATTGCTACAACTTGGAGAGCTTTTGGAAAAACTGGCATGCTTCTTTTAATAGATGGCTCGTAAGGTACATGTA
TATTCCTCTTGGTGGATCTGGGAGGAAGTTGCTCAATGTCTGGGTAATATTCACGTTCGTAGCTATTTGGCATGATCTGGAATGGAAACTCTTGTCATGG
GCATGGTTAACATGTTTATTCTTCATCCCAGAAATGCTGGTCAAGTCAGCGATGACTAAGTTACAGGCCAAGAGTTCTTTCGGAGAGCTCCTCTTCCGAG
AACTTAGCGCAGTCGCTGGCTCAATCACTATTACATGTCTCATGGTAGCAAACCTCGTTGGTTATGTCATCGGGCCGTCTGGGATTAACTGGTTGATGTC
CAAATTCCTAACAAGAGAAGGACTACCCGTGCTTAGTGTTATGATGGTATCTTTCTACGTCGGTGTTAAGGTACATATGTATATATATATTCCCCCATTG
GAAACCAAGTATAAGAATGTGATGTTTCTTAGTAAAACTTCTGATGAACTTGAACATAAACCTCTTCTTTCAGTTGATGTTCCACATTGA
AA sequence
>Lus10013485 pacid=23155119 polypeptide=Lus10013485 locus=Lus10013485.g ID=Lus10013485.BGIv1.0 annot-version=v1.0
MDQTSNLTGSISYIVSEKKKKLGEIGEGLLHHRFIVVGATIIVLTLSAELRRSLSAFPIAADTGSLVFAPFPLIPADCFQRVGWRRIEIAFLLLYAIAFY
VYIIHRSIQLAQEHKSKLYGFRPGWLFPPRLNDLSDAQWRNFRGNLPVLTAVFAIFAVLANSLKAFMSLRAKGMSITWLLISLAYLSYLHGACTFYILLI
ASANFIIVMMFARTKYFSPAIWIFNLSVLLSNRLYEGYPFSMFGEQWAYLDNFRGTFRWHICFNFVILRMVSFGYDYHWANQESRFDQEKHIQRCHSCKS
GTMCYQLLQERSVQIDKFSFTIYLSYLVYAPLYLAGPIVSFNAFASQLDMPVRTFATRNVFWYGLRWIFSFIIIEVVTHFFHYNAFAVSGIWKLLSPMDI
FIIGYGVLNFMWLKFSLIWRYFRLWSLINGIEAPENMPKCINNCYNLESFWKNWHASFNRWLVRYMYIPLGGSGRKLLNVWVIFTFVAIWHDLEWKLLSW
AWLTCLFFIPEMLVKSAMTKLQAKSSFGELLFRELSAVAGSITITCLMVANLVGYVIGPSGINWLMSKFLTREGLPVLSVMMVSFYVGVKVHMYIYIPPL
ETKYKNVMFLSKTSDELEHKPLLSVDVPH

DESeq2's median of ratios [FLAX]

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Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol HYPR_s2_CTRR_s2_FoxR_s4_CTRR_s4_FoxR_r1_CTRR_r1_FoxR_r3_CTRR_r3_FoxR_r1s2_CTRR_r1s2_FoxR_r3s2_CTRR_r3s2_FoxR_s6_CTRR_s6_Al4R_s6_Al12R_s6_Al24R_s8_CTRR_s8_Al4R_s8_Al12R_s8_Al24R_r5_CTRR_r5_Al4R_r5_Al12R_r5_Al24R_r7_CTRR_r7_Al4R_r7_Al12R_r7_Al24LEAF_NLEAF_PLEAF_NPKSAMAR_BetAR_rdfcPARTOP_BetTOP_rdfiFIBaiFIBbMID_BetMID_rdftFIBatFIB_GrtFIB_LitFIB_BitFIBbtFIBb_PUL8tFIBb_PUL24tFIBb_PUL96tFIBb_OPP8tFIBb_OPP24tFIBb_OPP96sXYLasXYLbsXYLb_PUL8sXYLb_PUL24sXYLb_PUL96sXYLb_OPP8sXYLb_OPP24sXYLb_OPP96
AT1G57600 MBOAT (membrane bound O-acyl t... Lus10013485
[exp]
0 1
AT4G31590 ATCSLC5, ATCSLC... CELLULOSE-SYNTHASE LIKE C5, Ce... Lus10026923
[exp]
1.0 0.9311
AT5G22030 UBP8 ubiquitin-specific protease 8 ... Lus10013369
[exp]
2.0 0.9133
AT2G03060 MADS AGL30 AGAMOUS-like 30 (.1.2) Lus10026613
[exp]
2.4 0.9011
AT2G27060 Leucine-rich repeat protein ki... Lus10026756
[exp]
2.8 0.8945
AT4G35335 Nucleotide-sugar transporter f... Lus10026562
[exp]
5.3 0.8792
AT2G27060 Leucine-rich repeat protein ki... Lus10025541
[exp]
5.5 0.8822
AT3G16950 PTLPD1, LPD1 lipoamide dehydrogenase 1 (.1.... Lus10037741
[exp]
7.9 0.8563
AT4G24530 O-fucosyltransferase family pr... Lus10009276
[exp]
8.7 0.8502
AT5G16210 HEAT repeat-containing protein... Lus10028491
[exp]
9.2 0.8806
AT5G64740 PRC1, IXR2, E11... PROCUSTE 1, ISOXABEN RESISTANT... Lus10041063
[exp]
9.9 0.8757

Lus10013485 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.