Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G56450 485 / 8e-174 PM-ANT Mitochondrial substrate carrier family protein (.1) AT5G17400 205 / 3e-64 ER-ANT1 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) AT5G13490 207 / 5e-64 AAC2 ADP/ATP carrier 2 (.1.2) AT3G08580 204 / 1e-62 AAC1 ADP/ATP carrier 1 (.1.2) AT4G28390 199 / 5e-61 ATAAC3, AAC3 ADP/ATP carrier 3 (.1) AT2G37890 134 / 2e-36 Mitochondrial substrate carrier family protein (.1) AT4G01100 134 / 2e-36 ADNT1 adenine nucleotide transporter 1 (.1.2) AT4G26180 131 / 1e-35 Mitochondrial substrate carrier family protein (.1) AT1G14560 129 / 2e-34 Mitochondrial substrate carrier family protein (.1) AT3G53940 121 / 1e-31 Mitochondrial substrate carrier family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039847 [exp] 219 / 5e-69 AT4G28390 545 / 0.0 ADP/ATP carrier 3 (.1) Lus10031843 [exp] 207 / 3e-64 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10031276 [exp] 207 / 7e-64 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016418 [exp] 204 / 4e-63 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10019702 [exp] 203 / 1e-62 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016417 [exp] 202 / 4e-62 AT5G13490 602 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10034658 [exp] 198 / 2e-61 AT5G17400 491 / 5e-177 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Lus10019701 [exp] 197 / 3e-60 AT5G13490 607 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10017874 [exp] 192 / 6e-59 AT5G17400 473 / 5e-170 endoplasmic reticulum-adenine nucleotide transporter 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G227100 [exp] 513 / 0 AT5G56450 462 / 4e-165 Mitochondrial substrate carrier family protein (.1) Potri.018G062350 [exp] 213 / 2e-69 AT5G56450 182 / 2e-57 Mitochondrial substrate carrier family protein (.1) Potri.017G012800 [exp] 206 / 9e-64 AT4G28390 575 / 0.0 ADP/ATP carrier 3 (.1) Potri.007G139100 [exp] 206 / 2e-63 AT4G28390 572 / 0.0 ADP/ATP carrier 3 (.1) Potri.001G019400 [exp] 205 / 4e-63 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.009G062200 [exp] 204 / 6e-63 AT5G13490 625 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.003G204600 [exp] 204 / 7e-63 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.001G267800 [exp] 202 / 4e-62 AT3G08580 592 / 0.0 ADP/ATP carrier 1 (.1.2) Potri.012G062500 [exp] 170 / 2e-50 AT5G17400 416 / 5e-147 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Potri.006G226300 [exp] 140 / 8e-39 AT1G14560 476 / 7e-170 Mitochondrial substrate carrier family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [flax] [poplar] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Lus10013518 pacid=23178131 polypeptide=Lus10013518 locus=Lus10013518.g ID=Lus10013518.BGIv1.0 annot-version=v1.0 ATGAGCAGAGATGACGTTGAGTCAGGAGAAAGCAAGAGTGTTTCTAACCCTCAATCATCATCGACATCTGATCCGCAAACATGGTTAGTGACCTTTCACA GAGATCTGATGGCCGGAGCGGTGATGGCTGGGGTGGTCCATACCATCGTGGCTCCAATAGAAAGAACCAAGCTATTGTTGCAAACCCAGGAGAGCAACAT GGCTATTGTCGGAGGAGGACACAGAAAATTCAAGGGCATGGTCGATTGTATTGTCCGTACGGTGAAGGAAGAAGGGATCGTCTCACTCTGGAGAGGAAAT GGCAGTAGCGTCCTACGCTATTATCCTTCCGTTGCCCTTAATTTCTCCCTCAAGGATCTGTACAGAAATGTATTGCGAAATCGTGCAGATGATGGGGACA TTCTATCTGGGCCAGCGGCCAACTTCATAGCTGGATCTGCTGCAGGCTGTACAACATTGATGATAATATACCCGTTGGATATCGCACACACACGTCTTGC TGCCGACATCGGAAGAAGTGATGTTCGGCAGTTCCAGGGTGTTTGTCATTTCCTTACAACCATACGTAAGAAAGAAGGGATTCGAGGGATATACAGAGGG CTTCCAGCATCGCTGCAAGGAATGGTCATTCATCGAGGCCTGTATTTTGGTGGATTTGATACAATGAAGGAGATATTATGCCAGGAAACCAAACCAGAAC TACCTTTGTGGATGCGTTGGATGGTAGCTCAAGCAGTGACAACGTCTGCTGGATTGTTGTCGTATCCAATGGATACAGTACGAAGGCGAATGATGATGCA ATCTGGGTCTGAACGACCAATGTTTCGTAATACAAGCGACTGCTGGAGAACAATTTACAAGACTGAAGGAGTTGCTTCATTTTACAGAGGTGCACTTTCA AACATGTTTAGAAGTACTGGTGCTGCTGCTATTCTTGTTTTATACGATGAAGTCAAAAAGTTCATGAAATGGGGTGGTCTCTAG
AA sequence Show only first row Show all	>Lus10013518 pacid=23178131 polypeptide=Lus10013518 locus=Lus10013518.g ID=Lus10013518.BGIv1.0 annot-version=v1.0 MSRDDVESGESKSVSNPQSSSTSDPQTWLVTFHRDLMAGAVMAGVVHTIVAPIERTKLLLQTQESNMAIVGGGHRKFKGMVDCIVRTVKEEGIVSLWRGN GSSVLRYYPSVALNFSLKDLYRNVLRNRADDGDILSGPAANFIAGSAAGCTTLMIIYPLDIAHTRLAADIGRSDVRQFQGVCHFLTTIRKKEGIRGIYRG LPASLQGMVIHRGLYFGGFDTMKEILCQETKPELPLWMRWMVAQAVTTSAGLLSYPMDTVRRRMMMQSGSERPMFRNTSDCWRTIYKTEGVASFYRGALS NMFRSTGAAAILVLYDEVKKFMKWGGL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G56450		PM-ANT	Mitochondrial substrate carrie...		Lus10013518 [exp]	0	1
AT2G32070			Polynucleotidyl transferase, r...		Lus10036291 [exp]	3.3	0.7528
AT1G08800			Protein of unknown function, D...		Lus10024869 [exp]	4.7	0.7371
AT5G27930			Protein phosphatase 2C family ...		Lus10020670 [exp]	8.8	0.7229
AT2G31890		ATRAP	RAP (.1)		Lus10006143 [exp]	12.1	0.6747
AT1G18660			zinc finger (C3HC4-type RING f...		Lus10019075 [exp]	15.7	0.6578
AT4G31500		SUR2, RNT1, RED...	SUPERROOT 2, RUNT 1, RED ELONG...		Lus10010066 [exp]	35.1	0.7141
AT2G45350		CRR4	CHLORORESPIRATORY REDUCTION 4,...		Lus10009290 [exp]	43.3	0.6714
AT2G32070			Polynucleotidyl transferase, r...		Lus10003635 [exp]	47.7	0.7078
AT5G14970			unknown protein		Lus10014506 [exp]	62.7	0.6390
AT3G05640			Protein phosphatase 2C family ...		Lus10020671 [exp]	67.3	0.6600

Compare expression of checked genes

Lus10013518 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.