Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43950 432 / 3e-152 OEP37, ATOEP37 ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, chloroplast outer envelope protein 37 (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003862 [exp] 623 / 0 AT2G43950 434 / 5e-153 ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, chloroplast outer envelope protein 37 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G144900 [exp] 488 / 3e-174 AT2G43950 397 / 9e-139 ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, chloroplast outer envelope protein 37 (.1.2.3) Potri.017G007300 [exp] 472 / 3e-168 AT2G43950 388 / 3e-135 ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37, chloroplast outer envelope protein 37 (.1.2.3)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10013621 pacid=23171614 polypeptide=Lus10013621 locus=Lus10013621.g ID=Lus10013621.BGIv1.0 annot-version=v1.0 ATGGCAGATTCTTCAAGGACAGCCTCTCCTCCTAATCCTACGCTTAAGTCTCCCGGGTCACTCTCCATTACCCCTAGTCACGGCTCCCCCCATGTCCCAC CTTCAGATCCTTCATCCGTCTCTCAATTTCCACCACGTCCGTTGCCGCCATCGGTGACTGATGTTCCTCCAAAGCCGCTGCCGCTATTTGTCTCGGTATT ATCCAAGAGACCTTCCTTCAGAGTGACTACTGAGTTTGACAGTGACAGCTCGGTGTTCTTTCAGAAGGTCTCCTGCAAGCTGCTGGACAGCTTCGCCAAG CTCAAGCTTACATTTCAGAACAACAGCAAAGGGGAAGTCTCCGAGCCTCAGATTTCTCTCCTCTCCAAAGTTCTTTCTATTCATTACGATGTTGAGGAGC AGAATGCGCTTGTTAAGACCTCCTTTGACGTCGGTTCCAGGCTTCATTTCAAGAGCTTTCACGATGTCAAGGCACAACAAGGAGAAGTTGCAGTTATCAC TAAATTTGCTGAGCCTGGCTACGCTCTTGAGCTCTCATCTCCTGTTCCTGCTGTTGGTTTGCCTAGAGCAACTCTGAAATTCCCTTTCGGTGAAGTTTCA CTGGAGGAGGGTGAGATTGCAGAAGAAAAGCGAACACTTTCAATTAGTGGACTTGGTAAAGCTCAGGTGTTGAATGGCCTTTGCTCTGCAACGTACAGTG AAGAGGAGTTGAAACTAAGATATTTGTATAAGGATGAGGCACTTTCGTTTATTCCGAGCATTTCACTGCCTGCTAATGCTTTGTCATTTGCATTCAAGCG TCGGTTTAATCCTTCTAATAAGTTAGGCTACTGGTATAATTTCGATTCCAACAACTGGAGTGCTGTGTACAAGCACACATACGGCAAGGATATCAAGTTG AAAACCGGTTATGATTCGGAAGTGCGACTTGGCTGGGCATCACTCTGGGTTGGGGATGAAGGTGGAAAGGCGAAAACTGCACCAATGAAGATGAAAGTGC AGTTTATGCTCCAAGTGCCGCAGGATGACATAAAATCCTCAGCATTGATGTTCCGTGTCAAAAAGCGATGGGACATATAA
AA sequence Show only first row Show all	>Lus10013621 pacid=23171614 polypeptide=Lus10013621 locus=Lus10013621.g ID=Lus10013621.BGIv1.0 annot-version=v1.0 MADSSRTASPPNPTLKSPGSLSITPSHGSPHVPPSDPSSVSQFPPRPLPPSVTDVPPKPLPLFVSVLSKRPSFRVTTEFDSDSSVFFQKVSCKLLDSFAK LKLTFQNNSKGEVSEPQISLLSKVLSIHYDVEEQNALVKTSFDVGSRLHFKSFHDVKAQQGEVAVITKFAEPGYALELSSPVPAVGLPRATLKFPFGEVS LEEGEIAEEKRTLSISGLGKAQVLNGLCSATYSEEELKLRYLYKDEALSFIPSISLPANALSFAFKRRFNPSNKLGYWYNFDSNNWSAVYKHTYGKDIKL KTGYDSEVRLGWASLWVGDEGGKAKTAPMKMKVQFMLQVPQDDIKSSALMFRVKKRWDI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G43950		OEP37, ATOEP37	ARABIDOPSIS CHLOROPLAST OUTER ...		Lus10013621 [exp]	0	1
AT3G54900		ATGRXCP, CXIP1	GLUTAREDOXIN, CAX interacting ...		Lus10012592 [exp]	1.4	0.7685
AT3G26115			Pyridoxal-5'-phosphate-depende...		Lus10036952 [exp]	3.9	0.7128
AT4G28706			pfkB-like carbohydrate kinase ...		Lus10011270 [exp]	6.6	0.7747
AT3G27670		RST1	RESURRECTION1, ARM repeat supe...		Lus10013076 [exp]	15.9	0.7064
AT4G16060			unknown protein		Lus10016832 [exp]	16.7	0.6564
AT3G11570		TBL8	TRICHOME BIREFRINGENCE-LIKE 8 ...		Lus10017004 [exp]	17.7	0.7035
AT5G02510			unknown protein		Lus10024410 [exp]	18.5	0.6923
AT3G17980		AtC2	Arabidopsis thaliana C2 domain...		Lus10009684 [exp]	22.4	0.6736
AT4G13040	AP2_ERF		Integrase-type DNA-binding sup...		Lus10022769 [exp]	22.6	0.6602
AT3G18650	MADS	AGL103	AGAMOUS-like 103 (.1)		Lus10024347 [exp]	32.7	0.6706

Compare expression of checked genes

Lus10013621 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.