Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G72250 1075 / 0 Di-glucose binding protein with Kinesin motor domain (.1.2) AT2G22610 696 / 0 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 526 / 3e-172 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G47500 339 / 9e-100 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT1G73860 336 / 3e-98 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G41310 333 / 1e-97 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT5G27000 328 / 6e-96 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) AT1G18410 331 / 7e-96 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G63640 328 / 3e-95 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) AT3G44730 311 / 4e-89 AtKIN14h, ATKP1 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005582 [exp] 2056 / 0 AT1G72250 1109 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10035954 [exp] 707 / 0 AT2G22610 1302 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10025708 [exp] 687 / 0 AT2G22610 1238 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10029914 [exp] 508 / 9e-165 AT5G27550 905 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10004487 [exp] 506 / 8e-164 AT5G27550 881 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10029865 [exp] 332 / 4e-97 AT5G27000 1014 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Lus10009851 [exp] 328 / 5e-96 AT2G47500 1245 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Lus10032264 [exp] 330 / 3e-95 AT1G63640 991 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Lus10015212 [exp] 324 / 4e-95 AT5G27000 924 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G140000 [exp] 1331 / 0 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.001G436200 [exp] 1326 / 0 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.002G110600 [exp] 711 / 0 AT2G22610 1057 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.013G020700 [exp] 525 / 1e-171 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.005G030271 [exp] 523 / 4e-171 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.013G011500 [exp] 330 / 3e-96 AT5G27000 1081 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Potri.005G021100 [exp] 329 / 8e-96 AT2G47500 1051 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.014G125700 [exp] 328 / 1e-95 AT2G47500 1218 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.001G467600 [exp] 327 / 1e-94 AT3G44730 1266 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Potri.002G201000 [exp] 323 / 8e-94 AT2G47500 1237 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain CL0202 [flax] [poplar] GBD PF11721 [flax] [poplar] Malectin Malectin domain
Representative CDS sequence Show only first row Show all	>Lus10013714 pacid=23169086 polypeptide=Lus10013714 locus=Lus10013714.g ID=Lus10013714.BGIv1.0 annot-version=v1.0 ATGGCGGATCCGGTTTCTTCTACTTCTCCTTCCTGTCCTTCTTTCTCTAACGGTAAGGGTTTTCTTTCTCTCTCTCTCTCTCTCTCTCTACATGGAACAT TCTTTTCTAGGTTAGTTAAGATCAGAAGTGGATTAGCCAGCTGGAAGTGTGATTGTGTTTTCTGTCTTTTCTCCCCCTTCCCAGGCCGATCTTTGCTAGG GTTTTCTCTGAGTTCTCCTGATCTGGTTATATGCGCTAGTTCACCTGAAATGGAGAGCAGTATTTGCGGAGTTTCCCCAGAAATTGTAGGTAGTAGGAAG AAACAGTGTATGGATCTTTCGTTAGACAACGGCATTGCTGGCTTTGAATCTGGTGCCAGGGAAACCAGTAGATCTGTTAAATTCTCCCCGTTTTGTCAAA CATTTTACAACAAGGAATTGTCTCCCGACTCATCCATCGAGCTCCTTGCCCATCCAGTGAAGGGAGAGAAAATTGTGGGAGATGTTCCTGCGCCTGGGTG GATAAGCATAAATGTGGGATACACTGATGATCAGACTGTGACTAAGGATGGTTTGAGCTATATGAAGGATAGTTGTTTCCTTGGTGGTGATACTGTGAGG ACTAATGCCATAATTGGTGATGGACTGGAGGAGGATGAGAGCCTTTGTCTATACCAAGCAGCTCGGATGGGTGACTTCTCGTACTGTTTTCGGTCATTGG AGCCAGGGGATTACGATGTTGCTCTTCACTTTGCGGAGATAGTGTTTACCAACGGGCCTCCAGGGTTAAGGGTGTTTGATGTTTTTCTGCAAGAAAAGAA GGTCGTTTCCAATTTAGACATCTTTGCTCGAGTAGGAGCAAACAATCCTTTGGTTATATCCGACCTCAAAGCTTCTGTTGGATTGGGTGAAAAATTATCG ATTAGATTAGAAGGTGTAACGGGTACACCGATTCTATCTGCAATTTCAGTTGCAAAGGATGATTCTGCTAGTACTGGAGAAGCTTCGTTTCCTGAGCATA TAAAAAGGTCCCGAGCAGCAAAAATTGAGTCACAGAAAAATGCTGACTGTGAGATGGAAGATGATTATCAGAAGCTGTTGACTGCATATGAATGTCAGCA ACGGGAACTAACGGAGATGAGAAAGACAGTCGAGGAACTTAATAGGGGGAACCAGGTAAAAACTAAAGAGTGCCAAAATGCGTTGAAGTCTATGCAGGAC CTCCAAAGCGAGTTGATGCGGAAGTCTATGCATGTAGGCTCATTAGCTTTTGCTGTTGAGGGGCAAGTCAAAGAGAAGAGTAGGTGGTTCTCAGCACTGA AAGACTTGACAGAAAAATTAGAGATAATGAAAGGGGACCAAATCAAGCTATCTGAGGAAGCAAGGTCATATAAAGCTTGTTTCAGGGAAATGAGCGAGAT TGCGTCTACCATTCAGTCCACAGTGAAACAGCAATCCGGTTTGCATGGAGATCTTATGAAGAAATACATGGAAGGAGTCAGAGAACGGAAGGAACTATAT AACAAGGTGTTAGAACTGAAAGGAAATATAAGGGTCTTTTGCAGGTGTAGGCCGTTGAATAGTGAAGAAATTGCAGCAGGAGCTGCAATGGCTATTGATT TTGAATCAGCTAAAGATGGAGAACTTACTGTTTTTTCAAATGGGGTTCCAAGAAAGACCTTCAAGTTCGACTCCATTTTCAGCCCTCAAGCAAACCAAGC TGATGTCTTTGAAGATACAGCCGCATTTGCAACCTCAGTGTTGGACGGTTACAACGTGTGCATATTTGCTTATGGGCAGACCGGAACTGGAAAAACTTTT ACAATGGAAGGCACAAAAGAGGCTCGTGGAGTGAATTATAAAACTCTGAATGAATTGTTTCACATGATAAAGGAGCGGGAGAAACTTTTCAAATATGAAG TATCAGTGAGTGTCTTAGAAGTATACAATGAGCAAATACGGGATTTGCTCGTCTCAAACTCACAGCCAGCAACTGTGAAAAGACTAGAAATAAGACCAGC AGGAGATGGACTGCATTGTGTTCAAGGTTTGGTTGAAGCACGTGTAAACAATGTAAATGAAGCCTGGGAAGTTTTACAGACTGGTAGCAATGCCAGGGCT GTCGGTTCAACCAGTGCAAATGATCACAGCAGCAGGTCTCATTGCATACACTGTGTGATGGTCAAGGGGGAGAATCTGTTAAACAAGGAATGTACGAGGA GCAAATTATGGTTGGTAGACCTAGCTGGAAGCGAGCGAGTGGCGAAAACAGAAGTCCAAGGAGAGAGATTAAAGGAAACTCAGAATATCAATAGATCATT GTCGGCATTAGGGGACGTCATATTCTCTCTTGCAACTAAGAGCCCTCATATTCCCTTCAGGAACTCGAAGCTGACGCATTTGCTTCAAGATTCTTTAGGA GGAGATTCAAAGGCACTCATGTTTGTACAGATCAGCCCAAACGAGAGTGACCTAAGCGAAACACTATGCTCGTTGAACTTTGCAAGCAGGGTTCGGGGCA TAGAGTTGGGCCCTGCAAAGAGACAATTTGACATGCCTGAGCTTGTAAGATATAAACAACTGGCTGAGAAAACTAGACAAGAGTTGAAGCTCAAAGATGT TCAAATAAGAAAGATGGACGATACGGTCCAAGGACTGGAGCTGAAGGTCAAAGAGAAGGACATAAAGAACAAACATTTGCAGGAAAAGATAAAGGAGCTG GAGTCCCAACTGCTAGTTGAAAGGAAGCTGGCACGTCAGCACGTGGACACAAAGATTGCTGAGCAGCATTCGAAACAATCAGACGATCAAACTTGTCCCC CACCAAGACCGCCACTTGGAACTCGGTTATTAGGGAATATTAGTAACAAGGCTTCTTCAAATGGATCCGCAAATGGTGCATTGAACAAGGAAACAATGGA TGCTGAGAACTTCCTTCCCTCGACGGATGTCATCTTCAAGATCGCCGACCCTATGGAGAAGGAAAACAATCCTGACATGGCTGAGAATCTGGGAATGCAA AAGAGAACAGCTGGCAGGTTCTCAATTTGTCCAGCTCCTAGAAGAAACTCATTCATTCCGTTCCCAAGTCCATCGCCATTACCATTATTACCAGTTTCTC TGAATCAAGATGCAGAGAAAGGAGTGTGTGAAAGTCCGAAAGAAGGGAAAACCGGGACGAGGAAGCGAAACAGCGTGCTGAGACGAAGCGTGCATAAAAA GTTGCAGAGCAGGTCGCCAATGCAGCAGCAGATTGCAAGGAAAGGAGGGATAAATGTGGGGATGGAGAAGGTGAGATTATCGATCGGAAGTCGAGGGAGG ATGGCGCAGAGAGTGGTGCTGCACGGAAGTGCTGCAGCGAAGAGGGTAGGAAGTAAGGAGATCACAACACAGCAGAAGCAAGTGAGCCATAAGGAGAAGG AAAGAGGATGGAATAGTGCAACAACAACGGCAAGGTTGTGA
AA sequence Show only first row Show all	>Lus10013714 pacid=23169086 polypeptide=Lus10013714 locus=Lus10013714.g ID=Lus10013714.BGIv1.0 annot-version=v1.0 MADPVSSTSPSCPSFSNGKGFLSLSLSLSLHGTFFSRLVKIRSGLASWKCDCVFCLFSPFPGRSLLGFSLSSPDLVICASSPEMESSICGVSPEIVGSRK KQCMDLSLDNGIAGFESGARETSRSVKFSPFCQTFYNKELSPDSSIELLAHPVKGEKIVGDVPAPGWISINVGYTDDQTVTKDGLSYMKDSCFLGGDTVR TNAIIGDGLEEDESLCLYQAARMGDFSYCFRSLEPGDYDVALHFAEIVFTNGPPGLRVFDVFLQEKKVVSNLDIFARVGANNPLVISDLKASVGLGEKLS IRLEGVTGTPILSAISVAKDDSASTGEASFPEHIKRSRAAKIESQKNADCEMEDDYQKLLTAYECQQRELTEMRKTVEELNRGNQVKTKECQNALKSMQD LQSELMRKSMHVGSLAFAVEGQVKEKSRWFSALKDLTEKLEIMKGDQIKLSEEARSYKACFREMSEIASTIQSTVKQQSGLHGDLMKKYMEGVRERKELY NKVLELKGNIRVFCRCRPLNSEEIAAGAAMAIDFESAKDGELTVFSNGVPRKTFKFDSIFSPQANQADVFEDTAAFATSVLDGYNVCIFAYGQTGTGKTF TMEGTKEARGVNYKTLNELFHMIKEREKLFKYEVSVSVLEVYNEQIRDLLVSNSQPATVKRLEIRPAGDGLHCVQGLVEARVNNVNEAWEVLQTGSNARA VGSTSANDHSSRSHCIHCVMVKGENLLNKECTRSKLWLVDLAGSERVAKTEVQGERLKETQNINRSLSALGDVIFSLATKSPHIPFRNSKLTHLLQDSLG GDSKALMFVQISPNESDLSETLCSLNFASRVRGIELGPAKRQFDMPELVRYKQLAEKTRQELKLKDVQIRKMDDTVQGLELKVKEKDIKNKHLQEKIKEL ESQLLVERKLARQHVDTKIAEQHSKQSDDQTCPPPRPPLGTRLLGNISNKASSNGSANGALNKETMDAENFLPSTDVIFKIADPMEKENNPDMAENLGMQ KRTAGRFSICPAPRRNSFIPFPSPSPLPLLPVSLNQDAEKGVCESPKEGKTGTRKRNSVLRRSVHKKLQSRSPMQQQIARKGGINVGMEKVRLSIGSRGR MAQRVVLHGSAAAKRVGSKEITTQQKQVSHKEKERGWNSATTTARL

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G72250			Di-glucose binding protein wit...		Lus10013714 [exp]	0	1
AT1G72250			Di-glucose binding protein wit...		Lus10005582 [exp]	1.0	0.9902
AT2G36200			P-loop containing nucleoside t...		Lus10014216 [exp]	2.0	0.9812
AT3G27330			zinc finger (C3HC4-type RING f...		Lus10022324 [exp]	2.6	0.9674
AT5G05940		ATROPGEF5, ROPG...	ROP guanine nucleotide exchang...		Lus10040248 [exp]	3.0	0.9667
AT4G38070	bHLH		basic helix-loop-helix (bHLH) ...		Lus10025718 [exp]	3.7	0.9655
AT4G14330			P-loop containing nucleoside t...		Lus10011804 [exp]	4.9	0.9677
					Lus10037590 [exp]	4.9	0.9724
AT3G44050			P-loop containing nucleoside t...		Lus10008438 [exp]	5.3	0.9714
AT3G06030		AtANP3, MAPKKK1...	NPK1-related protein kinase 3 ...		Lus10034060 [exp]	5.7	0.9669
AT3G51740		IMK2	inflorescence meristem recepto...		Lus10014235 [exp]	6.7	0.9691

Compare expression of checked genes

Lus10013714 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.