Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17860 169 / 6e-52 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73260 115 / 8e-31 ATKTI1 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) AT1G73325 106 / 3e-27 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73330 89 / 7e-21 ATDR4 drought-repressed 4 (.1) AT1G72290 54 / 3e-08 Kunitz family trypsin and protease inhibitor protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013730 [exp] 377 / 3e-133 AT1G17860 175 / 2e-55 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039210 [exp] 369 / 5e-130 AT1G17860 179 / 4e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039209 [exp] 356 / 3e-125 AT1G17860 179 / 6e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10026357 [exp] 335 / 2e-116 AT1G17860 181 / 6e-58 Kunitz family trypsin and protease inhibitor protein (.1) Lus10022302 [exp] 338 / 4e-116 AT1G17860 176 / 4e-54 Kunitz family trypsin and protease inhibitor protein (.1) Lus10042301 [exp] 330 / 2e-114 AT1G17860 182 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039208 [exp] 322 / 1e-111 AT1G17860 172 / 2e-54 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013732 [exp] 321 / 5e-111 AT1G17860 166 / 4e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10011090 [exp] 316 / 2e-109 AT1G17860 161 / 4e-50 Kunitz family trypsin and protease inhibitor protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G153400 [exp] 200 / 1e-63 AT1G17860 223 / 1e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153466 [exp] 198 / 3e-63 AT1G17860 222 / 4e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153600 [exp] 194 / 1e-61 AT1G17860 217 / 3e-72 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067600 [exp] 187 / 1e-58 AT1G17860 196 / 9e-64 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067900 [exp] 178 / 6e-55 AT1G17860 183 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153200 [exp] 167 / 1e-50 AT1G17860 191 / 5e-62 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067800 [exp] 138 / 1e-39 AT1G17860 137 / 8e-41 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G006900 [exp] 87 / 3e-20 AT1G73260 79 / 6e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.001G309900 [exp] 83 / 6e-19 AT1G17860 90 / 2e-22 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G000400 [exp] 82 / 2e-18 AT1G73260 91 / 9e-23 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [flax] [poplar] Trefoil PF00197 [flax] [poplar] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Lus10013731 pacid=23169098 polypeptide=Lus10013731 locus=Lus10013731.g ID=Lus10013731.BGIv1.0 annot-version=v1.0 ATGGTCGGACCAGAAGCAGAATTCATGCGGGTTTTCAAATACAATCACATCCTTAAGCTGTGGCAGAGTCTTGATAGCATCGAAGATCAAGTGGCTCTTC TGAGTCCCACTTCGTCCATGATTCTATCATGCAAGGAGCTTCAAGCTAAGGGATTAGAGAACGCCATTCACCTCCCGAGATTCCATGGCCCCTACAACGT CTACTACTCGTTGTCGACTAAGGAATTTACATCAACGGAACGTCCATTGAACTGCACTTGGATGCCAGCTAATTACAAGAAATACATTATGAAGACAACA ACAATAATGCTACTCACAATCTCTTCATTCACCATACTCCTTATCTCCTTCACCACGCTTTCATCCGCCGCATCGTCCCCAACTCCCGTCACCGACGTCG ACGGCACACCCCTCCGGTCAGGCCTCAAGTACTTCATCCGCCCATCCGTCTCCGGAAACGGCGGGGGCATCTTTCTAGACACAACCAAGACCCAAAAATG CCCTCTCTCCGTCTTCCAAGACGACTACGAGCTCTCCAAGGGTCTCCCGGTAGTTTTCCTGCCTGTCAACGCCAAGCCAGGCTACACAGTCCAGACGAAC ACCGACCTCAACATCGAGTTCACAGCAGAGACTGCGTGCGACGAAGCCCCCGTGTGGAAGGTGGAGAGTTACGACCATGATGTTAAGCAGTGGTTCGTCG GGACCGGTGGGGTCGAAGGGAAGCCTGGTCCGAGGACTGTGGACAGCTGGTTTAAGATTGTGAAATACGGAGGGAACTACAAGCTCGTGTATTGTCCTTC TGTGTGCAAGTCGTGTAAAGTTCAGTGTAAGGATGTCGGGGTTTATGTGGATGAAGATGGCAAGAAGAGGCTTGCCCTTACTGATGATGACCCTTCCATT GTTAAGTTCATGAAAGCTTCTAACAAGTAG
AA sequence Show only first row Show all	>Lus10013731 pacid=23169098 polypeptide=Lus10013731 locus=Lus10013731.g ID=Lus10013731.BGIv1.0 annot-version=v1.0 MVGPEAEFMRVFKYNHILKLWQSLDSIEDQVALLSPTSSMILSCKELQAKGLENAIHLPRFHGPYNVYYSLSTKEFTSTERPLNCTWMPANYKKYIMKTT TIMLLTISSFTILLISFTTLSSAASSPTPVTDVDGTPLRSGLKYFIRPSVSGNGGGIFLDTTKTQKCPLSVFQDDYELSKGLPVVFLPVNAKPGYTVQTN TDLNIEFTAETACDEAPVWKVESYDHDVKQWFVGTGGVEGKPGPRTVDSWFKIVKYGGNYKLVYCPSVCKSCKVQCKDVGVYVDEDGKKRLALTDDDPSI VKFMKASNK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17860			Kunitz family trypsin and prot...		Lus10013731 [exp]	0	1
AT1G17860			Kunitz family trypsin and prot...		Lus10007892 [exp]	1.0	0.9946
AT1G17860			Kunitz family trypsin and prot...		Lus10039210 [exp]	2.4	0.9910
AT1G17860			Kunitz family trypsin and prot...		Lus10013730 [exp]	2.8	0.9862
AT1G17860			Kunitz family trypsin and prot...		Lus10022302 [exp]	4.6	0.9864
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10001103 [exp]	4.9	0.9842
AT1G62420			Protein of unknown function (D...		Lus10003258 [exp]	5.5	0.9790
AT5G09360		LAC14	laccase 14 (.1)		Lus10006157 [exp]	6.7	0.9853
AT3G28210		SAP12, PMZ	STRESS-ASSOCIATED PROTEIN 12, ...		Lus10039469 [exp]	7.5	0.9833
AT1G17860			Kunitz family trypsin and prot...		Lus10007902 [exp]	9.4	0.9831
					Lus10027144 [exp]	9.9	0.9623

Compare expression of checked genes

Lus10013731 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.