Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17860 166 / 4e-52 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73260 117 / 8e-33 ATKTI1 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) AT1G73325 113 / 3e-31 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73330 82 / 3e-19 ATDR4 drought-repressed 4 (.1) AT1G72290 56 / 2e-09 Kunitz family trypsin and protease inhibitor protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039208 [exp] 411 / 2e-148 AT1G17860 172 / 2e-54 Kunitz family trypsin and protease inhibitor protein (.1) Lus10011090 [exp] 379 / 1e-135 AT1G17860 161 / 4e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039209 [exp] 363 / 2e-129 AT1G17860 179 / 6e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013730 [exp] 356 / 9e-127 AT1G17860 175 / 2e-55 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039210 [exp] 356 / 1e-126 AT1G17860 179 / 4e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013731 [exp] 358 / 6e-126 AT1G17860 172 / 5e-53 Kunitz family trypsin and protease inhibitor protein (.1) Lus10022302 [exp] 355 / 1e-124 AT1G17860 176 / 4e-54 Kunitz family trypsin and protease inhibitor protein (.1) Lus10042301 [exp] 335 / 4e-118 AT1G17860 182 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Lus10026357 [exp] 329 / 7e-116 AT1G17860 181 / 6e-58 Kunitz family trypsin and protease inhibitor protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G153400 [exp] 197 / 5e-64 AT1G17860 223 / 1e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153466 [exp] 196 / 2e-63 AT1G17860 222 / 4e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153600 [exp] 191 / 2e-61 AT1G17860 217 / 3e-72 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067600 [exp] 188 / 2e-60 AT1G17860 196 / 9e-64 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067900 [exp] 184 / 5e-59 AT1G17860 183 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153200 [exp] 163 / 8e-51 AT1G17860 191 / 5e-62 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067800 [exp] 143 / 6e-43 AT1G17860 137 / 8e-41 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G006900 [exp] 96 / 1e-24 AT1G73260 79 / 6e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.004G000400 [exp] 84 / 5e-20 AT1G73260 91 / 9e-23 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.007G111500 [exp] 82 / 4e-19 AT1G73260 79 / 5e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [flax] [poplar] Trefoil PF00197 [flax] [poplar] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Lus10013732 pacid=23169080 polypeptide=Lus10013732 locus=Lus10013732.g ID=Lus10013732.BGIv1.0 annot-version=v1.0 ATGAAGACAACAATGCTACTTGCAATCTCTTCATTCATCATAGTCCTTGTCTCCTTTACCACACTTTCTTCCGCCGCTTCATTCCCGACTACTGTCACTG ACATCGATGGCGCACCCCTCCGCTCGGGCCGCAAGTACTTCATCCTCCCATCCGTCTCCGGGGACGGGGGCGGACTAGCTCTAGGAAGAAGAACCGATAC AAAGAAATGCCCGCTCTCCGTCATCCAGGACGACTACGAGCTCTCCAAGGGTATTCCGGTAGTTTTCCTGCCCATCAACTCAAAGCCGGGCTACACCGTT CGAACTGACACCGATCTCAACATCGAGTTCACTACAGAGACGGCATGTGACGAAGCCCCCGTGTGGAAGGTGGAGAGTTATGACCATGACGTCAGCCAGT GGTTCATTGGCACCGGTGGTATCGAAGGAAAGCCCGGTCCGAGGACTGTGGATAACTGGTTTAAGATTGACAATTACGGCGGGAACTACAAGCTCGTGTA CTGCCCTTCTGTGTGCAAGACTTGCAAGGTTCAGTGTAAGGATGTCGGGGTTTACGTGGATGAATATGGCAAGAAGAGGCTTGCTCTTACTGACGATGAG CCTTCCATTGTTAAGTTCATGAAAGCTCCCAAATAG
AA sequence Show only first row Show all	>Lus10013732 pacid=23169080 polypeptide=Lus10013732 locus=Lus10013732.g ID=Lus10013732.BGIv1.0 annot-version=v1.0 MKTTMLLAISSFIIVLVSFTTLSSAASFPTTVTDIDGAPLRSGRKYFILPSVSGDGGGLALGRRTDTKKCPLSVIQDDYELSKGIPVVFLPINSKPGYTV RTDTDLNIEFTTETACDEAPVWKVESYDHDVSQWFIGTGGIEGKPGPRTVDNWFKIDNYGGNYKLVYCPSVCKTCKVQCKDVGVYVDEYGKKRLALTDDE PSIVKFMKAPK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17860			Kunitz family trypsin and prot...		Lus10013732 [exp]	0	1
AT1G17860			Kunitz family trypsin and prot...		Lus10011090 [exp]	1.0	0.9788
					Lus10027144 [exp]	3.3	0.9656
AT1G17860			Kunitz family trypsin and prot...		Lus10039208 [exp]	3.7	0.9677
					Lus10022008 [exp]	5.9	0.9692
AT5G39150			RmlC-like cupins superfamily p...		Lus10006536 [exp]	7.6	0.9738
AT1G17860			Kunitz family trypsin and prot...		Lus10007892 [exp]	8.7	0.9712
AT5G13080	WRKY	ATWRKY75, WRKY7...	ARABIDOPSIS THALIANA WRKY DNA-...		Lus10011346 [exp]	16.0	0.9713
AT1G17860			Kunitz family trypsin and prot...		Lus10013731 [exp]	16.2	0.9673
AT2G19070		SHT	spermidine hydroxycinnamoyl tr...		Lus10021394 [exp]	16.5	0.9629
AT1G14540			Peroxidase superfamily protein...		Lus10000003 [exp]	18.2	0.9624

Compare expression of checked genes

Lus10013732 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.