Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G17230 437 / 5e-154 EXL5 EXORDIUM like 5 (.1) AT5G51550 348 / 1e-119 EXL3 EXORDIUM like 3 (.1) AT2G35150 322 / 2e-109 EXL7, EXL1 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) AT5G64260 117 / 2e-30 EXL2, MSJ1.10 EXORDIUM like 2 (.1) AT4G08950 117 / 3e-30 EXO EXORDIUM, Phosphate-responsive 1 family protein (.1) AT1G35140 116 / 6e-30 EXL1, EXL7, PHI-1 PHOSPHATE-INDUCED 1, EXORDIUM like 1, Phosphate-responsive 1 family protein (.1) AT5G09440 88 / 1e-19 EXL4 EXORDIUM like 4 (.1) AT3G02970 56 / 1e-08 EXL6 EXORDIUM like 6 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026548 [exp] 568 / 0 AT2G17230 499 / 2e-178 EXORDIUM like 5 (.1) Lus10031130 [exp] 343 / 2e-117 AT5G51550 526 / 0.0 EXORDIUM like 3 (.1) Lus10018314 [exp] 331 / 2e-112 AT2G35150 395 / 5e-138 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) Lus10031709 [exp] 228 / 3e-73 AT5G51550 377 / 2e-132 EXORDIUM like 3 (.1) Lus10017138 [exp] 219 / 1e-70 AT2G35150 240 / 9e-80 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) Lus10017050 [exp] 117 / 7e-30 AT4G08950 404 / 2e-142 EXORDIUM, Phosphate-responsive 1 family protein (.1) Lus10021370 [exp] 113 / 2e-28 AT4G08950 403 / 1e-141 EXORDIUM, Phosphate-responsive 1 family protein (.1) Lus10017139 [exp] 100 / 3e-25 AT2G35150 149 / 1e-44 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) Lus10010352 [exp] 103 / 8e-25 AT5G64260 378 / 2e-132 EXORDIUM like 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G206600 [exp] 505 / 0 AT2G17230 481 / 4e-171 EXORDIUM like 5 (.1) Potri.009G167800 [exp] 497 / 8e-178 AT2G17230 499 / 1e-178 EXORDIUM like 5 (.1) Potri.015G129700 [exp] 354 / 1e-121 AT5G51550 521 / 0.0 EXORDIUM like 3 (.1) Potri.012G128100 [exp] 347 / 5e-119 AT5G51550 521 / 0.0 EXORDIUM like 3 (.1) Potri.015G122100 [exp] 321 / 1e-108 AT2G35150 377 / 3e-131 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) Potri.014G126000 [exp] 132 / 1e-35 AT5G64260 240 / 9e-78 EXORDIUM like 2 (.1) Potri.002G098600 [exp] 127 / 5e-34 AT4G08950 404 / 4e-142 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163000 [exp] 122 / 2e-32 AT5G64260 379 / 8e-133 EXORDIUM like 2 (.1) Potri.005G163500 [exp] 116 / 8e-30 AT4G08950 430 / 2e-152 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.001G311700 [exp] 115 / 1e-29 AT5G64260 444 / 2e-158 EXORDIUM like 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04674 [flax] [poplar] Phi_1 Phosphate-induced protein 1 conserved region
Representative CDS sequence Show only first row Show all	>Lus10013834 pacid=23159504 polypeptide=Lus10013834 locus=Lus10013834.g ID=Lus10013834.BGIv1.0 annot-version=v1.0 ATGCCTCTCCTCCATTCCTTCTTCTTCTTCCTCCTCCTCCTCCTCTGCTACACCGCCACCAATGTCGCCTCCGCTTCAGAAAAAATCCAGACATTAGAAA CAAAACCCCAATACTTCAACCCCAAACTCCCACCCAGAACCCTCACCACCAACAAGAAATTCGAAGGCTCCTCCGATCTCGTCAACCTCCGCTACCACAT GGGCCCAGTCCTCTCCTCTTCCCCGATCAACGTCTACCTCATCTGGTACGGCCGCTGGCCTAACTCCCAGAAGCTCCTTATCAAGGACTTCATCCACTCC ATCTCCCCTTCCTCCTCCTCCGCCGCCGACGCGGCCCCTTCTCCTTCCGTCTCCCAGTGGTGGAAAACCGTCTCCCTCTACACCGACCAAACCGGCGCCA ACGTCTCCCGCTCAATCATCGTCGCCGGCGAGTACAACGACCGAGCTTACTCCCACGGAAAGCAATTGACCCGCCTCTCCGTCCAACAGGTCATCGCCAC TGCGGTCCGATCCGCTCCCTTCCCCGTCGATCACAAGAATGGGATCTACCTAATCCTGACGGCGGACGACGTCGGCGTTCAGGACTTTTGTCGAGCAGTT TGCGGGTTCCATTACTTCACTTTCCCGTCCATGGTTGGGTACACTCTGCCTTACGCCTGGGTGGGGAATTCAGGGAAGCAGTGTCCCGAAGTATGCGCTT ATCCTTTCGCCGTACCGGGGTATATGGGCGGAGGTGGGCCCGGAGCGCTGAAGCCGCCGAATGGAGATGTGGGAGTTGACGGGATGATTAGCGTGATTGG GCACGAGCTTGCGGAGCTGTCGACGAATCCGTTGGTGAATGCCTGGTATGCAGGGGAGGATCCGACGGCGCCGACGGAGATTGGGGATCTGTGTGAAGGG CTGTACGGAAGCGGCGGCGGAGGAGGGTACATCGGGCAGGTGATGAAGGATAAGGGAGGGAGGACTTATAATGTGAATGGGAAGAGAGGGAGGAAGTTTT TGGTGCAGTGGATCTGGAGCACTGAGCTCAAAGCTTGCGCTGGTCCCAATGCTTTGGATTGA
AA sequence Show only first row Show all	>Lus10013834 pacid=23159504 polypeptide=Lus10013834 locus=Lus10013834.g ID=Lus10013834.BGIv1.0 annot-version=v1.0 MPLLHSFFFFLLLLLCYTATNVASASEKIQTLETKPQYFNPKLPPRTLTTNKKFEGSSDLVNLRYHMGPVLSSSPINVYLIWYGRWPNSQKLLIKDFIHS ISPSSSSAADAAPSPSVSQWWKTVSLYTDQTGANVSRSIIVAGEYNDRAYSHGKQLTRLSVQQVIATAVRSAPFPVDHKNGIYLILTADDVGVQDFCRAV CGFHYFTFPSMVGYTLPYAWVGNSGKQCPEVCAYPFAVPGYMGGGGPGALKPPNGDVGVDGMISVIGHELAELSTNPLVNAWYAGEDPTAPTEIGDLCEG LYGSGGGGGYIGQVMKDKGGRTYNVNGKRGRKFLVQWIWSTELKACAGPNALD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G17230		EXL5	EXORDIUM like 5 (.1)		Lus10013834 [exp]	0	1
AT2G17230		EXL5	EXORDIUM like 5 (.1)		Lus10026548 [exp]	1.0	0.9183
AT5G10530			Concanavalin A-like lectin pro...		Lus10007076 [exp]	3.5	0.8825
AT4G38660			Pathogenesis-related thaumatin...		Lus10028447 [exp]	3.7	0.8896
AT2G17040	NAC	ANAC036	NAC domain containing protein ...		Lus10003333 [exp]	4.9	0.8852
AT3G62060			Pectinacetylesterase family pr...		Lus10038024 [exp]	5.3	0.8635
AT5G67210		IRX15-L	IRX15-LIKE, Protein of unknown...		Lus10027879 [exp]	5.9	0.8773
AT1G10020			Protein of unknown function (D...		Lus10032807 [exp]	8.4	0.8212
AT5G25280			serine-rich protein-related (....		Lus10038100 [exp]	9.8	0.8677
AT1G13250		GATL3	galacturonosyltransferase-like...		Lus10034274 [exp]	11.2	0.8427
AT5G67210		IRX15-L	IRX15-LIKE, Protein of unknown...		Lus10002829 [exp]	12.3	0.8615

Compare expression of checked genes

Lus10013834 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.