Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013977 [exp] 228 / 2e-75 AT1G29010 52 / 1e-07 unknown protein Lus10015398 [exp] 136 / 6e-40 AT1G29010 46 / 1e-05 unknown protein
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10013951 pacid=23170031 polypeptide=Lus10013951 locus=Lus10013951.g ID=Lus10013951.BGIv1.0 annot-version=v1.0 ATGGGTTCTTCCAACAATGGAGCTTCTTCTTTGGATCATCAAATGCAGAGGAACCAACAACCTTCTTACCCCACTATGATGAATTTCTTCCCAAGTTCTT CATCATCTGGAGTAGAGCCCCCTTCAAACCAAAGCCGCCATTTTCCAGACAAACCAAGCGTTATGATCGGAGGAAAAAGACAGTGTCCATTCTACATTGG TGATAATACAGTAGCAGCTGAAACTCCATCATCATTCCGATTCCAATCTCCTTCCTATCTACCTTATTTCTCACCCAGAACGAATCACGACACAGATTCA AGAGGGAATTTGGTGCTGTTGGGTTGTCCTACAACAACCAGAGAAAGGCATTCAATGTTATACAATCATCCTCCTCAAATGCAGCAAAGATCAGTAGAGG CTTATGCTTCTTATGAAGGGTCGATGATGAACAAGGCGCCGCCTTTATTCTACAGCTTCTTGGAAGAGCCGGCTGGAATTGTGCGCAAGGGCGAGACAGA GTTGATTAGTGAAGAAGAAGGAGATGGGATTGATCTGAGATTGAAGCTGTGA
AA sequence Show only first row Show all	>Lus10013951 pacid=23170031 polypeptide=Lus10013951 locus=Lus10013951.g ID=Lus10013951.BGIv1.0 annot-version=v1.0 MGSSNNGASSLDHQMQRNQQPSYPTMMNFFPSSSSSGVEPPSNQSRHFPDKPSVMIGGKRQCPFYIGDNTVAAETPSSFRFQSPSYLPYFSPRTNHDTDS RGNLVLLGCPTTTRERHSMLYNHPPQMQQRSVEAYASYEGSMMNKAPPLFYSFLEEPAGIVRKGETELISEEEGDGIDLRLKL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10013951 [exp]	0	1
AT1G48930		ATGH9C1	glycosyl hydrolase 9C1 (.1)		Lus10017402 [exp]	4.8	0.7550
AT1G12560		ATHEXPALPHA1.26...	expansin A7 (.1)		Lus10006711 [exp]	6.9	0.7537
AT4G30320			CAP (Cysteine-rich secretory p...		Lus10019993 [exp]	9.4	0.7343
AT5G20260			Exostosin family protein (.1)		Lus10027707 [exp]	9.9	0.6543
AT4G02270		RHS13	root hair specific 13 (.1)		Lus10013419 [exp]	11.1	0.7525
AT1G63450		RHS8	root hair specific 8 (.1)		Lus10000604 [exp]	11.2	0.7335
AT5G05500		MOP10	Pollen Ole e 1 allergen and ex...		Lus10009837 [exp]	14.1	0.7216
AT5G05500		MOP10	Pollen Ole e 1 allergen and ex...		Lus10040948 [exp]	16.2	0.6977
					Lus10040759 [exp]	16.3	0.7177
AT2G45550		CYP76C4	"cytochrome P450, family 76, s...		Lus10028896 [exp]	18.8	0.6990

Compare expression of checked genes

Lus10013951 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.