Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G15695 447 / 4e-156 Protein of unknown function DUF829, transmembrane 53 (.1) AT5G44250 321 / 7e-107 Protein of unknown function DUF829, transmembrane 53 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019874 [exp] 810 / 0 AT2G15695 457 / 4e-160 Protein of unknown function DUF829, transmembrane 53 (.1) Lus10042660 [exp] 379 / 2e-129 AT5G44250 464 / 3e-163 Protein of unknown function DUF829, transmembrane 53 (.1.2) Lus10021741 [exp] 365 / 3e-124 AT5G44250 454 / 3e-159 Protein of unknown function DUF829, transmembrane 53 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G142000 [exp] 543 / 0 AT2G15695 537 / 0.0 Protein of unknown function DUF829, transmembrane 53 (.1) Potri.009G103500 [exp] 539 / 0 AT2G15695 528 / 0.0 Protein of unknown function DUF829, transmembrane 53 (.1) Potri.002G127600 [exp] 422 / 1e-146 AT5G44250 501 / 1e-177 Protein of unknown function DUF829, transmembrane 53 (.1.2) Potri.014G031800 [exp] 409 / 1e-141 AT5G44250 496 / 7e-176 Protein of unknown function DUF829, transmembrane 53 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF05705 [flax] [poplar] DUF829 Eukaryotic protein of unknown function (DUF829)
Representative CDS sequence Show only first row Show all	>Lus10014042 pacid=23156758 polypeptide=Lus10014042 locus=Lus10014042.g ID=Lus10014042.BGIv1.0 annot-version=v1.0 ATGTTTGGAGGAGGTGGAGGAGGGAGTGTGTATTGGGGGAGGATAGGGAGGAAATCCAAAGGAATTGTGGTGATCTTCGCTTGGGTCTCTGTTAATCCCG CCGATTTGAGGAGCCTCGTCGAGTTGTATTCATCTCTCGGTTGGAATCCTCTCGTTTGCCATGCCGATTTCCTCACCGCGTTTTATCCTGAGAGAAGCAT GTCTTTGGCGTTTCTTCTCCTCAGTGAACTTGTCCAGGAGCTAAGGGTCCAGCCATGTCCAGTTGTCTTCGTTGCTCTTTCTGGTGGTTCAAAGGCTTGC ATGTTCAAAGTTTTCCAGATTATCCAAGGTTCATGTGAAGGCCATCTTAATCTGGATGAAAGTCGTCTAGTTGGGAACTGTTTCTCTGGGCATATCTATG ACTCGAGTCCAGTCAACTTTACAAGTGACTGGGCTGTCCGTTCTGCTCTCCCGTCCATTCAGAAAATGCCTGGCCCTTCTAAACTCATGTCTTGGTTCAC AAAAGGAGTTACTTCTGGTCTTGATGGTCTCTACATTACCAGATTTGAGCATCAACGTACGCAGTATTGGCAAACTTTGTACTCCTCAGTTGAGTTTGGA GCTCCATATCTGATATTATGTTCAGATAATGATGAGCTTGTACCTTGTAATATTATCTGTAATTTTGGTCATCAGCTTCAAGTACTTGGGGCAGATGTTG CACTTGTGAAGCTGAATGCTTCTCCTCACCTAGGTCACTACAAGCATCATCCAATGCCTTACACCACTGCAGTGACCAATCTGCTGGAGAAGGCCACATC AGTTTATCGTCAAAGAATGCAACAAGTCGAAGATGGGTTGAAAATGAATGGCATGCATGCTCAAATATCAGATCTAGTTTGTGATCTTCAGAAAGTGGCA GTTGAATCAAATGAAGGTTTAAGAAGCGTTCCAGTCCTCCCAAACAACGATTTCTTTGAACAAAGCTCTTCCAGAGACCAAGATAACAGAGAATCAGAAG CCACCCGAGAAGAAAGGAAAGACAGCTCAATATACCCAAGGAGTCCCCCCAGAATGAGCGCTCATGGTGTTCTCGGTCAAGCGCTCTTCGATGTCTGTGT TCCCAAATATGTCGACGGGTGGGATATTAGATTCTCCGGCTGTCTCAACGGACAACCGGTTGCTTCTGTTATTAAGCGGTCGCATCTCCAAGGCTTGAAA CGCATCCGCCGCTCGAGATTATAA
AA sequence Show only first row Show all	>Lus10014042 pacid=23156758 polypeptide=Lus10014042 locus=Lus10014042.g ID=Lus10014042.BGIv1.0 annot-version=v1.0 MFGGGGGGSVYWGRIGRKSKGIVVIFAWVSVNPADLRSLVELYSSLGWNPLVCHADFLTAFYPERSMSLAFLLLSELVQELRVQPCPVVFVALSGGSKAC MFKVFQIIQGSCEGHLNLDESRLVGNCFSGHIYDSSPVNFTSDWAVRSALPSIQKMPGPSKLMSWFTKGVTSGLDGLYITRFEHQRTQYWQTLYSSVEFG APYLILCSDNDELVPCNIICNFGHQLQVLGADVALVKLNASPHLGHYKHHPMPYTTAVTNLLEKATSVYRQRMQQVEDGLKMNGMHAQISDLVCDLQKVA VESNEGLRSVPVLPNNDFFEQSSSRDQDNRESEATREERKDSSIYPRSPPRMSAHGVLGQALFDVCVPKYVDGWDIRFSGCLNGQPVASVIKRSHLQGLK RIRRSRL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G15695			Protein of unknown function DU...		Lus10014042 [exp]	0	1
AT2G15695			Protein of unknown function DU...		Lus10019874 [exp]	1.0	0.9335
AT2G46550			unknown protein		Lus10005973 [exp]	2.2	0.9108
AT4G32190			Myosin heavy chain-related pro...		Lus10041037 [exp]	2.4	0.9322
AT5G04040		SDP1	SUGAR-DEPENDENT1, Patatin-like...		Lus10038968 [exp]	5.0	0.8573
AT2G35800		SAMTL	S-adenosyl methionine transpor...		Lus10023493 [exp]	6.9	0.9226
AT3G45300		IVDH, ATIVD, IV...	isovaleryl-CoA-dehydrogenase (...		Lus10036122 [exp]	7.5	0.9227
AT1G28260			Telomerase activating protein ...		Lus10015430 [exp]	8.5	0.9013
AT4G28570			Long-chain fatty alcohol dehyd...		Lus10003621 [exp]	8.5	0.8126
AT5G52190			Sugar isomerase (SIS) family p...		Lus10014993 [exp]	9.2	0.8735
AT4G24800		ECIP1	EIN2 C-terminus Interacting Pr...		Lus10018085 [exp]	9.5	0.9097

Compare expression of checked genes

Lus10014042 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.