Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G53390 156 / 4e-45 O-acyltransferase (WSD1-like) family protein (.1) AT3G49190 155 / 1e-44 O-acyltransferase (WSD1-like) family protein (.1) AT3G49200 154 / 6e-44 O-acyltransferase (WSD1-like) family protein (.1) AT3G49210 152 / 4e-43 O-acyltransferase (WSD1-like) family protein (.1) AT1G72110 135 / 5e-37 O-acyltransferase (WSD1-like) family protein (.1), O-acyltransferase (WSD1-like) family protein (.2) AT2G38995 132 / 4e-36 O-acyltransferase (WSD1-like) family protein (.1), O-acyltransferase (WSD1-like) family protein (.2) AT5G53380 128 / 1e-34 O-acyltransferase (WSD1-like) family protein (.1) AT5G12420 127 / 3e-34 O-acyltransferase (WSD1-like) family protein (.1) AT5G37300 126 / 5e-34 WSD1 O-acyltransferase (WSD1-like) family protein (.1) AT5G16350 124 / 3e-33 O-acyltransferase (WSD1-like) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019840 [exp] 433 / 1e-156 AT3G49200 155 / 2e-44 O-acyltransferase (WSD1-like) family protein (.1) Lus10027887 [exp] 274 / 2e-90 AT5G53390 262 / 5e-82 O-acyltransferase (WSD1-like) family protein (.1) Lus10002836 [exp] 212 / 4e-70 AT5G53390 96 / 2e-23 O-acyltransferase (WSD1-like) family protein (.1) Lus10009718 [exp] 143 / 7e-40 AT3G49200 532 / 0.0 O-acyltransferase (WSD1-like) family protein (.1) Lus10004008 [exp] 134 / 1e-36 AT5G53390 475 / 2e-164 O-acyltransferase (WSD1-like) family protein (.1) Lus10017718 [exp] 94 / 4e-22 AT3G49190 187 / 4e-53 O-acyltransferase (WSD1-like) family protein (.1) Lus10033680 [exp] 92 / 3e-21 AT3G49210 175 / 9e-49 O-acyltransferase (WSD1-like) family protein (.1) Lus10017721 [exp] 89 / 2e-20 AT3G49210 170 / 5e-47 O-acyltransferase (WSD1-like) family protein (.1) Lus10033678 [exp] 80 / 4e-17 AT3G49190 166 / 2e-45 O-acyltransferase (WSD1-like) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G304600 [exp] 315 / 2e-106 AT3G49200 263 / 4e-82 O-acyltransferase (WSD1-like) family protein (.1) Potri.012G014200 [exp] 155 / 2e-44 AT5G53390 559 / 0.0 O-acyltransferase (WSD1-like) family protein (.1) Potri.019G070900 [exp] 112 / 1e-28 AT5G53390 446 / 2e-153 O-acyltransferase (WSD1-like) family protein (.1) Potri.019G070975 [exp] 102 / 3e-25 AT5G53390 427 / 4e-146 O-acyltransferase (WSD1-like) family protein (.1) Potri.017G010700 [exp] 96 / 5e-23 AT3G49190 196 / 1e-56 O-acyltransferase (WSD1-like) family protein (.1) Potri.017G010300 [exp] 92 / 2e-21 AT3G49190 182 / 2e-51 O-acyltransferase (WSD1-like) family protein (.1) Potri.007G139600 [exp] 90 / 1e-20 AT3G49190 197 / 4e-57 O-acyltransferase (WSD1-like) family protein (.1) Potri.017G010500 [exp] 88 / 5e-20 AT3G49190 216 / 2e-64 O-acyltransferase (WSD1-like) family protein (.1) Potri.013G085101 [exp] 84 / 1e-18 AT3G49190 182 / 2e-51 O-acyltransferase (WSD1-like) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06974 [flax] [poplar] WS_DGAT_C WS/DGAT C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10014075 pacid=23156787 polypeptide=Lus10014075 locus=Lus10014075.g ID=Lus10014075.BGIv1.0 annot-version=v1.0 ATGCAGACTATTAATGATGTTCTGTTTGGTGTCGTAACATCTGGACTATCAAAGTACTTGGACCATCGAGCTCCAAAAGCTGTGAAGCAAGGACAGCAAA TGACAGGGGTGGCCATGGTCAACCTAAGAAAACAGCCTGGATTGCAGGAATTATCAGACATGATGGAAAGTTCTTCAGCAGCAAAGTCGGGGAACAAATT TGGGATGATGTTGTTACCATTGTTTTACCAGCATATCAGTGAAGACTCGGATCCTCTTGAGCCTGTCCGGATTGCCAAGAAGATGATCGACAGGAAGAAA ACATCGATCGAATCCCACTTCTCTTACCAAGTCGGCGATCTACTCATGTCCTTGCTCGGACCAAAGGCAGCTTGCATTTGTAACTATAGGATCATGTCGA ACACGACGTTTACAATATCCAACGTTGTTGGACCCAAGGAGGAAATCTCCATTGCTGGGAATCCCGTCTCATACATCAGAGTCAATACCTCAAGCCTTCC TCATGCTTTGACAATGCACATGGTCAGCTATGCAGGAAGAGCTGATATGCAGATCTTAGTGGCCAAGGACATAATCCCAGACCCTGAGTTTCTGGCTAAG TGCTTCGAAGATTCTTTGCTCGAGATGAAAACTGCAGCTCGAGAAGCTGCTTCCTTGACTTCCTGA
AA sequence Show only first row Show all	>Lus10014075 pacid=23156787 polypeptide=Lus10014075 locus=Lus10014075.g ID=Lus10014075.BGIv1.0 annot-version=v1.0 MQTINDVLFGVVTSGLSKYLDHRAPKAVKQGQQMTGVAMVNLRKQPGLQELSDMMESSSAAKSGNKFGMMLLPLFYQHISEDSDPLEPVRIAKKMIDRKK TSIESHFSYQVGDLLMSLLGPKAACICNYRIMSNTTFTISNVVGPKEEISIAGNPVSYIRVNTSSLPHALTMHMVSYAGRADMQILVAKDIIPDPEFLAK CFEDSLLEMKTAAREAASLTS

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G53390			O-acyltransferase (WSD1-like) ...		Lus10014075 [exp]	0	1
AT1G12600			UDP-N-acetylglucosamine (UAA) ...		Lus10029605 [exp]	1.0	0.9476
AT4G09670			Oxidoreductase family protein ...		Lus10005674 [exp]	4.0	0.9428
AT4G28400			Protein phosphatase 2C family ...		Lus10008556 [exp]	9.2	0.9392
AT3G61710		AtBECLIN1, ATAT...	BECLIN1, AUTOPHAGY 6 (.1.2.3)		Lus10012632 [exp]	10.1	0.9259
AT1G34320			Protein of unknown function (D...		Lus10018317 [exp]	10.5	0.9299
AT3G15780			unknown protein		Lus10023132 [exp]	11.4	0.9013
AT5G60600		HDS, ISPG, CSB3...	CONSTITUTIVE SUBTILISIN 3, CHL...		Lus10021480 [exp]	12.0	0.9395
AT3G05660		AtRLP33	receptor like protein 33 (.1)		Lus10002214 [exp]	12.5	0.9328
AT3G10980		SAG20, WI12, AT...	PLAC8 family protein (.1)		Lus10012212 [exp]	13.6	0.9338
AT4G37320		CYP81D5	"cytochrome P450, family 81, s...		Lus10041643 [exp]	15.0	0.9266

Compare expression of checked genes

Lus10014075 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.