Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G15480 472 / 6e-164 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT2G15490 468 / 7e-163 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT4G34131 446 / 4e-154 UGT73B3 UDP-glucosyl transferase 73B3 (.1) AT4G34138 431 / 4e-148 UGT73B1 UDP-glucosyl transferase 73B1 (.1) AT4G34135 424 / 2e-145 UGT73B2 UDP-glucosyltransferase 73B2 (.1.2) AT2G36780 367 / 5e-123 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 363 / 3e-121 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 357 / 5e-119 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36750 353 / 2e-117 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT3G53160 346 / 1e-114 UGT73C7 UDP-glucosyl transferase 73C7 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019833 [exp] 809 / 0 AT2G15480 483 / 2e-168 UDP-glucosyl transferase 73B5 (.1.2) Lus10014079 [exp] 485 / 4e-169 AT4G34131 483 / 3e-168 UDP-glucosyl transferase 73B3 (.1) Lus10019835 [exp] 481 / 2e-167 AT2G15480 476 / 3e-165 UDP-glucosyl transferase 73B5 (.1.2) Lus10019832 [exp] 444 / 4e-153 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014083 [exp] 437 / 4e-150 AT4G34131 489 / 2e-170 UDP-glucosyl transferase 73B3 (.1) Lus10014086 [exp] 431 / 1e-147 AT2G15490 496 / 4e-173 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014084 [exp] 402 / 1e-136 AT2G15490 445 / 2e-153 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10019831 [exp] 397 / 4e-135 AT2G15490 425 / 8e-146 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014080 [exp] 365 / 3e-124 AT2G15480 330 / 3e-110 UDP-glucosyl transferase 73B5 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G099032 [exp] 562 / 0 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303000 [exp] 560 / 0 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098966 [exp] 555 / 0 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303600 [exp] 553 / 0 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303700 [exp] 522 / 0 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303300 [exp] 518 / 0 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G302400 [exp] 507 / 1e-177 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G098400 [exp] 481 / 2e-167 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302300 [exp] 479 / 5e-167 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1) Potri.002G123700 [exp] 418 / 1e-142 AT4G34131 446 / 3e-153 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10014082 pacid=23156755 polypeptide=Lus10014082 locus=Lus10014082.g ID=Lus10014082.BGIv1.0 annot-version=v1.0 ATGGCCAAGATCTTTGCTTCTCGTGGTGTCAAGGTTACCATCGTCACCACTCCTCTCAACGTCCCATTCTTCTCCAAGACGATCAGCAAGCACTCCGAAT CCACCGGATCCGAGATTCGGATTCGAACCCTCAAATTCCCGACAGCCGAGTTCAGGCTGCCTGAAGGATGCGAAAACACCGAGGTCATCACTTCCCTCAA CCTGGGGTGGGAGACCTTCTCCAAGTTCTTGCTCGCCTCCACCAAACTTCAGGAATCCTTGGAGAAGCTTCTGGAAGAGGCCCGTCCAGATTGTCTCGTG GCCGATATGTTCTTCCCGTGGGCAACTGACTCGTCGGAAAAGTTCGGGATCCCGAGGCTTTTGTTTCATGGTACAAGCTTCTTCTCTTTATCTGTTATGG ACGTTGTGTCTAGGTATGAGCCGCATAAGGATGTCTCATCGGATACAGAACCGTTCGAGGTACCCGGCGGGATCCCGGACAGGATCATGTTGACTAAGCG CCAGTTGCCGGCATCGGCAGTAACACCTGGACAGGAAGACAGCTTCCTGTGGGAGTTTTTCGAAAGAGTGAGTGAGTCAAACTCTCATGGTTATGGTACA GTGGTCAACAGCTTCTACGAGCTTGAACCAGGATATGCTGACTATTACAGAAATGTGCTCGGAAGGAAATCTTGGCACGTTGGGCCCGTCTCGTTGTGCA GTGCTGATGTGGATGACAAAGCGAACCGAGGGAAGGAATCCTCCATTGATAGGGAGCACTGTCTTAATTGGCTAGACTCGAAGGAACCGATGTCCGTCGT ATACATATGCTTTGGCAGCGTAGCAAATTTCAGCGTGGAACAGCTTAGAGAGGTTGCAACCGGAATTGAAGCTTCAGGCCAACAATTCATTTGGGTGGTG AGGAAAAACCGCCAAAATGACAACGATACTGAAGACTGGCTGCCCGAAGGTTTTGAGGAAAGGACAAAAGGTAGAGGGATAATTATTAGAGGGTGGGCCC CACAAGTTTTTATATTGGAACACGTGTCGATCGGGGCCATTGTGACGCACTGCGGATGGAATTCCACGCTGGAGGCGATATCTGCCGGGCTTCCGATTGT AACGTGGCCTGTGATGGCAGAACAATTTTATAACGAGAAGTTTGTGACAGATGTAGTGAAGATTGGGGTTGGAGTCGGGGCGGCACAATCGCCTCTGGGA GCGACGATAGAGGGTGTGAAGGTGGAAAAGGCTATAAGGAGGATTATGTTGACGGGGGATGAAGAGGTGGAGGAGATGCGAAGGAGAGCGAAAAATTTAG GGGAGATGGCAAGGAAGGCGGTGGAAAAAGGCGGATCTTCTTACCGTGATTTGGATGCTCTGATTGAGGAGTTGAGGTTGAATCGTAAAGCCTAA
AA sequence Show only first row Show all	>Lus10014082 pacid=23156755 polypeptide=Lus10014082 locus=Lus10014082.g ID=Lus10014082.BGIv1.0 annot-version=v1.0 MAKIFASRGVKVTIVTTPLNVPFFSKTISKHSESTGSEIRIRTLKFPTAEFRLPEGCENTEVITSLNLGWETFSKFLLASTKLQESLEKLLEEARPDCLV ADMFFPWATDSSEKFGIPRLLFHGTSFFSLSVMDVVSRYEPHKDVSSDTEPFEVPGGIPDRIMLTKRQLPASAVTPGQEDSFLWEFFERVSESNSHGYGT VVNSFYELEPGYADYYRNVLGRKSWHVGPVSLCSADVDDKANRGKESSIDREHCLNWLDSKEPMSVVYICFGSVANFSVEQLREVATGIEASGQQFIWVV RKNRQNDNDTEDWLPEGFEERTKGRGIIIRGWAPQVFILEHVSIGAIVTHCGWNSTLEAISAGLPIVTWPVMAEQFYNEKFVTDVVKIGVGVGAAQSPLG ATIEGVKVEKAIRRIMLTGDEEVEEMRRRAKNLGEMARKAVEKGGSSYRDLDALIEELRLNRKA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G15480		UGT73B5	UDP-glucosyl transferase 73B5 ...		Lus10014082 [exp]	0	1
AT5G06060			NAD(P)-binding Rossmann-fold s...		Lus10004704 [exp]	2.8	0.9564
AT3G14690		CYP72A15	"cytochrome P450, family 72, s...		Lus10026178 [exp]	3.0	0.9576
AT2G46370		FIN219, JAR1	JASMONATE RESISTANT 1, FAR-RED...		Lus10005151 [exp]	3.2	0.9491
AT2G36890	MYB	BIT1, ATMYB38, ...	REGULATOR OF AXILLARY MERISTEM...		Lus10026543 [exp]	3.7	0.9422
AT1G47530			MATE efflux family protein (.1...		Lus10042130 [exp]	4.6	0.9560
AT1G07180		NDA1, ATNDI1	ARABIDOPSIS THALIANA INTERNAL ...		Lus10006731 [exp]	6.4	0.9110
					Lus10035552 [exp]	6.5	0.9096
AT1G07180		NDA1, ATNDI1	ARABIDOPSIS THALIANA INTERNAL ...		Lus10020091 [exp]	7.2	0.9033
AT4G15480		UGT84A1	UDP-Glycosyltransferase superf...		Lus10019808 [exp]	8.1	0.9374
AT2G47130		AtSDR3	short-chain dehydrogenase/redu...		Lus10042181 [exp]	9.4	0.9396

Compare expression of checked genes

Lus10014082 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.