Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G15490 490 / 8e-171 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT4G34131 488 / 4e-170 UGT73B3 UDP-glucosyl transferase 73B3 (.1) AT2G15480 476 / 4e-165 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT4G34135 471 / 2e-163 UGT73B2 UDP-glucosyltransferase 73B2 (.1.2) AT4G34138 458 / 4e-158 UGT73B1 UDP-glucosyl transferase 73B1 (.1) AT2G36780 403 / 2e-136 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 402 / 3e-136 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 399 / 1e-134 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36790 395 / 3e-133 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT2G36760 391 / 1e-131 UGT73C2 UDP-glucosyl transferase 73C2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019832 [exp] 968 / 0 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014086 [exp] 809 / 0 AT2G15490 496 / 4e-173 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014084 [exp] 643 / 0 AT2G15490 445 / 2e-153 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10019831 [exp] 618 / 0 AT2G15490 425 / 8e-146 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10019833 [exp] 454 / 9e-157 AT2G15480 483 / 2e-168 UDP-glucosyl transferase 73B5 (.1.2) Lus10014079 [exp] 452 / 1e-155 AT4G34131 483 / 3e-168 UDP-glucosyl transferase 73B3 (.1) Lus10014082 [exp] 451 / 1e-155 AT2G15480 483 / 3e-168 UDP-glucosyl transferase 73B5 (.1.2) Lus10019835 [exp] 449 / 1e-154 AT2G15480 476 / 3e-165 UDP-glucosyl transferase 73B5 (.1.2) Lus10010239 [exp] 424 / 2e-144 AT2G15480 392 / 3e-132 UDP-glucosyl transferase 73B5 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G098400 [exp] 620 / 0 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302400 [exp] 607 / 0 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302300 [exp] 583 / 0 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1) Potri.001G303600 [exp] 556 / 0 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098966 [exp] 554 / 0 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303000 [exp] 552 / 0 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303700 [exp] 535 / 0 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303300 [exp] 534 / 0 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.009G099032 [exp] 533 / 0 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.002G123700 [exp] 457 / 1e-157 AT4G34131 446 / 3e-153 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10014083 pacid=23156777 polypeptide=Lus10014083 locus=Lus10014083.g ID=Lus10014083.BGIv1.0 annot-version=v1.0 ATGGAGTCAAAGCAGCTCCATGTAGTCTTCTTCCCATTCATGGCTCAGGGCCACATGATCCCACTCGTCGACATGGCCAGGCTATTCGCCCGCCAAGGCG CCAAATCCACCATCGTCACTACTCCACTCAACGCCCCGCTCTTTTCCGACAAGATCAAGCGGGAATCGAATCAAGGTCTCCAAATTCAAACCCATGTCAT CGACTTCCCTTTCCTCGAAGCCGGATTACCAGAAGGCTGCGAGAACGTTAAAGCACTCAAGTCCCCTGCCATGATCTTCCAATTCTTCTTATCCATGCAC GTTTTTAAGCAACCGATTGAGGAGCTACTAAGACTATGGAGGCCGGACTGTATCGTGGCGGACTTGGTCTTCCACTGGGCGACCGAATCCGCCCACAGTC TCGGGATCCCGAGGCTGTTCTTCAACGGGACAGGCTCCTTCTCAATGTGTTTGATTGATTGTTTCAAACGCTACGACCCTTGCAAAGGCATCGAATCTGA TTCGGAGCCCGTCGTTTTGCCTGGTTTACCGCACAAGATTGAATTCAAGAAGTCGCAGCTTCCACCTTTCTGGAAAGGTGAGAAGGTCGATGACAAAATA GAAGAACTCAGACATCTGATTGACAAATCGGAGGAGGAGAGCTTCGGGACTGTGGTGAATAGCTTCCATGAGCTCGAGCCTGGGTACTCAGAGCACTACA GGGAGGTGATAGGAAGGAAGGCATGGTTCATTGGTCCATTGTCGGGTTGTAACAAGGACACTACTCTGGACAAAGCAGATAGAGGAGATGCTGCAGCCAT TGATGGACACCAATGTCTGAGATGGCTAGACGGTAGAGTACCGAATTCGGTTATCTACATTTGCTTTGGGAGCATATCCGGTCTTCCCGACACTCAGCTA TTGGAGATTGCTGCAGCTCTCGAGGCGTCAGGGCAGAGCTTCATTTGGGTGGTGAAAAAGGGAGCTAAAGGGAACAGTACTGAAGAGGAAAAAGAAGAAT GGCTGCCGGAAGGGTTTGAGGAAAGGATGGAAGGGAAAGGGTTGATCATAAGGGGATGGGCGCCACAAGTGCTGATACTTGATCACCAAGCAACAGGCGG GTTCATGACTCACTGTGGATGGAACTCCACGCTTGAAGGTGTGGCTGCAGGGGTGTCCATGGTGACATGGCCGCTACAGGCAGAGCAGTTCTTGAATGAG AAGCTGGTGACGGATGTTCTGAGGGTCGGGGTTGGTGTTGGGTCTCAAGAATGGTCGAGGGGTGAGTGGAAAACCGTCGTGGCAAAGGAAGACATAGAGA GAGCAGTTAGCCAAGTAATGGTTGGTGAACATGCTGAAGAAATGAGAGGGCGAGCTAAGGAGCTTAAGGAAAAGGCTGTAAAGGCTAATGAAGAAGGTGG ATCGTCTTACACTGATTTGAAATCATTGTTGGAGGAGCTTGCATCTGTACGAGACAAGAAGGATGTCGATTTGTCCAGCTTGAAACTGTAA
AA sequence Show only first row Show all	>Lus10014083 pacid=23156777 polypeptide=Lus10014083 locus=Lus10014083.g ID=Lus10014083.BGIv1.0 annot-version=v1.0 MESKQLHVVFFPFMAQGHMIPLVDMARLFARQGAKSTIVTTPLNAPLFSDKIKRESNQGLQIQTHVIDFPFLEAGLPEGCENVKALKSPAMIFQFFLSMH VFKQPIEELLRLWRPDCIVADLVFHWATESAHSLGIPRLFFNGTGSFSMCLIDCFKRYDPCKGIESDSEPVVLPGLPHKIEFKKSQLPPFWKGEKVDDKI EELRHLIDKSEEESFGTVVNSFHELEPGYSEHYREVIGRKAWFIGPLSGCNKDTTLDKADRGDAAAIDGHQCLRWLDGRVPNSVIYICFGSISGLPDTQL LEIAAALEASGQSFIWVVKKGAKGNSTEEEKEEWLPEGFEERMEGKGLIIRGWAPQVLILDHQATGGFMTHCGWNSTLEGVAAGVSMVTWPLQAEQFLNE KLVTDVLRVGVGVGSQEWSRGEWKTVVAKEDIERAVSQVMVGEHAEEMRGRAKELKEKAVKANEEGGSSYTDLKSLLEELASVRDKKDVDLSSLKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G34131		UGT73B3	UDP-glucosyl transferase 73B3 ...		Lus10014083 [exp]	0	1
AT4G35160			O-methyltransferase family pro...		Lus10015311 [exp]	1.0	0.9766
AT5G23160			unknown protein		Lus10017395 [exp]	1.4	0.9728
AT3G09270		ATGSTU8	glutathione S-transferase TAU ...		Lus10001491 [exp]	3.2	0.9642
AT4G27290			S-locus lectin protein kinase ...		Lus10038552 [exp]	3.9	0.9700
AT5G08790	NAC	ATAF2, ANAC081	Arabidopsis NAC domain contain...		Lus10020883 [exp]	4.9	0.9556
AT2G41380			S-adenosyl-L-methionine-depend...		Lus10001155 [exp]	6.0	0.9676
AT2G27510		ATFD3	ferredoxin 3 (.1)		Lus10004870 [exp]	9.9	0.9595
AT3G14690		CYP72A15	"cytochrome P450, family 72, s...		Lus10026178 [exp]	10.5	0.9558
AT2G30140			UDP-Glycosyltransferase superf...		Lus10042261 [exp]	11.0	0.9596
AT4G37990		CAD-B2, ATCAD8,...	CINNAMYL-ALCOHOL DEHYDROGENASE...		Lus10025706 [exp]	11.8	0.9553

Compare expression of checked genes

Lus10014083 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.