Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019824 [exp] 238 / 1e-80 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10014090 pacid=23156773 polypeptide=Lus10014090 locus=Lus10014090.g ID=Lus10014090.BGIv1.0 annot-version=v1.0 ATGAACAGCACAGCAGCAGCAGCAGCAGGAGGAATGAACTTGGACATGTACCACAGCCTCATCTTCAGCAGCGGGGATTACTGGGGATTCGATCGTTTCG TCCCGAAAATGGAGAGTAGTAACGATCACGAAGATAAGCTGCATGGTGGGGTTGATGTTGGGATCGACGAGGATGATTTGCTGTATGCAGAGCTGAGCAG GCAGGTTTTGCTGCTGACTGCTGACGATGATGATGATCAGGATCGTTTCTTGACGGAGAAATACCGTGGTGGTGGTAATAATGGAGTTGGGAACTTGATG ATGATGAACTATGGTAATAATAGGAATGCTAATTTGGGTTTGGGAGGTGGAAATCAGTATTTCAACATGTGGGAGACTGAGTATTTAGCTAATGCTTCCT GCAATTGGCCTGCTGCTGCTGGGAGTTCTTCATGGGGGACCTCTGTTAATAACATAGGAACTGGAGTCTTCATTCCTTATGTCGCCAACTCCAAGAGAAG GAACCGCAGAGGAAAGAAGAATGGGAAGAACAGAGGAAACAAGTTAGCTACAGAGAGCAAGCAACAATGGTGA
AA sequence Show only first row Show all	>Lus10014090 pacid=23156773 polypeptide=Lus10014090 locus=Lus10014090.g ID=Lus10014090.BGIv1.0 annot-version=v1.0 MNSTAAAAAGGMNLDMYHSLIFSSGDYWGFDRFVPKMESSNDHEDKLHGGVDVGIDEDDLLYAELSRQVLLLTADDDDDQDRFLTEKYRGGGNNGVGNLM MMNYGNNRNANLGLGGGNQYFNMWETEYLANASCNWPAAAGSSSWGTSVNNIGTGVFIPYVANSKRRNRRGKKNGKNRGNKLATESKQQW

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10014090 [exp]	0	1
AT5G02640			unknown protein		Lus10038485 [exp]	6.1	0.8491
AT1G70670		AtCLO4	Arabidopsis thaliana caleosin ...		Lus10014588 [exp]	18.6	0.8484
AT3G47340		AT-ASN1, DIN6, ...	DARK INDUCIBLE 6, ARABIDOPSIS ...		Lus10042281 [exp]	29.3	0.8169
AT5G06839	bZIP	TGA10, bZIP65	TGACG \(TGA\) motif-binding pr...		Lus10035499 [exp]	32.1	0.7711
AT2G41510		ATCKX1, CKX1	cytokinin oxidase/dehydrogenas...		Lus10031046 [exp]	44.2	0.8284
					Lus10006648 [exp]	45.3	0.7597
AT4G13030			P-loop containing nucleoside t...		Lus10025900 [exp]	49.4	0.7975
AT3G27890		NQR	NADPH:quinone oxidoreductase (...		Lus10026172 [exp]	50.6	0.8268
					Lus10033259 [exp]	50.7	0.8268
AT2G46950		CYP709B2	"cytochrome P450, family 709, ...		Lus10035907 [exp]	80.6	0.7939

Compare expression of checked genes

Lus10014090 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.