Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019813 [exp] 349 / 3e-125 ND / Lus10019815 [exp] 342 / 1e-122 ND / Lus10014099 [exp] 342 / 2e-122 ND / Lus10028949 [exp] 306 / 5e-108 ND / Lus10024445 [exp] 231 / 9e-79 ND / Lus10037860 [exp] 223 / 5e-75 ND / Lus10000191 [exp] 209 / 3e-69 ND / Lus10039879 [exp] 207 / 6e-69 ND / Lus10029851 [exp] 207 / 1e-68 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G081800 [exp] 279 / 3e-97 ND / Potri.002G158600 [exp] 276 / 3e-96 ND / Potri.002G158700 [exp] 273 / 7e-95 ND / Potri.014G082700 [exp] 267 / 9e-93 ND / Potri.019G100100 [exp] 263 / 6e-91 ND / Potri.014G081900 [exp] 256 / 2e-88 ND / Potri.014G082000 [exp] 231 / 2e-78 ND / Potri.003G126200 [exp] 223 / 2e-75 ND / Potri.017G153100 [exp] 149 / 1e-45 ND / Potri.003G126400 [exp] 138 / 2e-42 ND /
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10014101 pacid=23156801 polypeptide=Lus10014101 locus=Lus10014101.g ID=Lus10014101.BGIv1.0 annot-version=v1.0 ATGGCCGCGAAGATCGAGGCACAGAGCTGCAAGCCGAGTGGTTACATAACGGGGATCACTCCACCACCAGGGCAATGCAACCAGGGAGAAGAATCTGACT GCTGTAAAGCAGGCAAGCACTACACCACCTACAAATGTTCACCCCCGGTGACTGGTCGCACCAAGGCGACTCTGACTTGGAACAGCTTTGAGAAAGGAGG GAGTGGAGGAGGGCCATCCGAGTGCGATAACAAGTACCACCCCGATGATCATCCAGTGGTAGCGTTGTCGACTGGATGGTTCAATAACAAGAGTAGGTGT CTCAACTTTATAAACATTCACGGGAATGGGAAGACTGTTAGGGCAATGGTCGTAGATGAGTGTGACTCTACCATGGGGTGTGATTCTGACCATGATTATC AGCCTCCATGTCCTGACAACATTGTTGACGCATCGAAAGCGGTCTGGAAAGCTTTGGGGGTGCCCGAGGATAATTGGGGTGATCTTGATATCACCTGGTC CGATGCTTGA
AA sequence Show only first row Show all	>Lus10014101 pacid=23156801 polypeptide=Lus10014101 locus=Lus10014101.g ID=Lus10014101.BGIv1.0 annot-version=v1.0 MAAKIEAQSCKPSGYITGITPPPGQCNQGEESDCCKAGKHYTTYKCSPPVTGRTKATLTWNSFEKGGSGGGPSECDNKYHPDDHPVVALSTGWFNNKSRC LNFINIHGNGKTVRAMVVDECDSTMGCDSDHDYQPPCPDNIVDASKAVWKALGVPEDNWGDLDITWSDA

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10014101 [exp]	0	1
AT1G11340			S-locus lectin protein kinase ...		Lus10036139 [exp]	11.4	0.8690
AT2G19480		NFA2, NFA02, NA...	NUCLEOSOME/CHROMATIN ASSEMBLY ...		Lus10005551 [exp]	13.5	0.8568
AT3G62770		ATATG18A	autophagy 18a, Transducin/WD40...		Lus10029900 [exp]	15.7	0.8404
					Lus10034718 [exp]	15.9	0.8450
AT2G27410	B3		Domain of unknown function (DU...		Lus10027284 [exp]	17.2	0.8612
AT1G24540		CYP86C1	"cytochrome P450, family 86, s...		Lus10006232 [exp]	18.1	0.8555
AT1G24590	AP2_ERF	ESR2, DRNL, SOB...	FOR SUPPRESSOR OF PHYTOCHROMEB...		Lus10017907 [exp]	19.9	0.7900
AT1G14750		SDS	SOLO DANCERS, Cyclin family pr...		Lus10021812 [exp]	25.5	0.7978
AT5G48140			Pectin lyase-like superfamily ...		Lus10013780 [exp]	26.3	0.8512
AT5G03610			GDSL-like Lipase/Acylhydrolase...		Lus10028145 [exp]	28.2	0.8515

Compare expression of checked genes

Lus10014101 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.