Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G15220 202 / 3e-65 Plant basic secretory protein (BSP) family protein (.1) AT2G15130 190 / 9e-61 Plant basic secretory protein (BSP) family protein (.1), Plant basic secretory protein (BSP) family protein (.2) AT2G15170 45 / 3e-06 Plant basic secretory protein (BSP) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019799 [exp] 463 / 3e-168 AT2G15220 199 / 2e-64 Plant basic secretory protein (BSP) family protein (.1) Lus10013863 [exp] 202 / 6e-65 AT2G15220 224 / 9e-74 Plant basic secretory protein (BSP) family protein (.1) Lus10026586 [exp] 202 / 8e-65 AT2G15220 204 / 8e-66 Plant basic secretory protein (BSP) family protein (.1) Lus10026579 [exp] 199 / 7e-64 AT2G15220 226 / 1e-74 Plant basic secretory protein (BSP) family protein (.1) Lus10019806 [exp] 196 / 8e-63 AT2G15220 279 / 8e-96 Plant basic secretory protein (BSP) family protein (.1) Lus10001609 [exp] 196 / 2e-62 AT2G15220 198 / 1e-63 Plant basic secretory protein (BSP) family protein (.1) Lus10013868 [exp] 195 / 2e-62 AT2G15220 217 / 3e-71 Plant basic secretory protein (BSP) family protein (.1) Lus10013869 [exp] 194 / 5e-62 AT2G15220 209 / 5e-68 Plant basic secretory protein (BSP) family protein (.1) Lus10001360 [exp] 191 / 7e-61 AT2G15220 202 / 3e-65 Plant basic secretory protein (BSP) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G299500 [exp] 217 / 3e-71 AT2G15220 298 / 1e-103 Plant basic secretory protein (BSP) family protein (.1) Potri.001G299400 [exp] 214 / 5e-70 AT2G15220 280 / 2e-96 Plant basic secretory protein (BSP) family protein (.1) Potri.009G094600 [exp] 210 / 2e-68 AT2G15220 288 / 3e-99 Plant basic secretory protein (BSP) family protein (.1) Potri.001G299600 [exp] 205 / 2e-66 AT2G15220 277 / 6e-95 Plant basic secretory protein (BSP) family protein (.1) Potri.009G094500 [exp] 190 / 1e-60 AT2G15220 269 / 8e-92 Plant basic secretory protein (BSP) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0126 [flax] [poplar] Peptidase_MA PF04450 [flax] [poplar] BSP Peptidase of plants and bacteria
Representative CDS sequence Show only first row Show all	>Lus10014111 pacid=23156848 polypeptide=Lus10014111 locus=Lus10014111.g ID=Lus10014111.BGIv1.0 annot-version=v1.0 ATGTCAATGGTCACATTTCTTCCCATCTCGCTATTCCTTATCATCACTTGTGTAGTAATCTCACTATCATCAATCCCGCCAACCCAAGGAATAGAGTACC CAATCACGATCACATCCTCCAACACCTCGACCGGCGTCCAACGCTTCATCCATCGGATCGGAAAGAGCTACGCCAGCAGGAAGATGGAATCGGGATCCAA CTTCATTTGGAGAACCCTCCACCAGACCAATTCCTCAGACCGTAAGGATTACCGGAGAATCGAGCTCTTCATCCAAGACATGAAGCAGCGGAACGTATAC CAAGTGGACAACAGGATCGCAATCAGCGCGGAATACATCGGGAACTACACTGCCGGGAACCTGAAGAGAGAGTTCACGGGGATGTTGTACACCCAGCTGG TCAAGGTTTGGGCATGGAACGGTATGGGCCAGGCACCCGACGGGTTGGTCAGTGGGATCGCGGATTACGTGAGGATGAAGGCTCGACTGGAGGCTGCGAC CGGGTGGGCCCGCCCAGGGGACGGGAAGAAGTGGGACCAAGGGGAGGATGTCACGGCGAGGTTCTTGGAGTATTGTGGTCGGTTTAAGGAAGGGTTTGTT GGTGAGCTTAACAGGAAGATGAAGGATGGTTATTCGAATGACTATTTTAAGGAGCTGCTTGGAAAGAACGTTGATCAGGTTTGGAAAAGTTACAAGGCCA GGTATCCGTGA
AA sequence Show only first row Show all	>Lus10014111 pacid=23156848 polypeptide=Lus10014111 locus=Lus10014111.g ID=Lus10014111.BGIv1.0 annot-version=v1.0 MSMVTFLPISLFLIITCVVISLSSIPPTQGIEYPITITSSNTSTGVQRFIHRIGKSYASRKMESGSNFIWRTLHQTNSSDRKDYRRIELFIQDMKQRNVY QVDNRIAISAEYIGNYTAGNLKREFTGMLYTQLVKVWAWNGMGQAPDGLVSGIADYVRMKARLEAATGWARPGDGKKWDQGEDVTARFLEYCGRFKEGFV GELNRKMKDGYSNDYFKELLGKNVDQVWKSYKARYP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G15220			Plant basic secretory protein ...		Lus10014111 [exp]	0	1
AT2G34160			Alba DNA/RNA-binding protein (...		Lus10021222 [exp]	2.4	0.7800
AT5G22900		ATCHX3	cation/H+ exchanger 3, ARABIDO...		Lus10000154 [exp]	4.6	0.7719
AT5G59810		ATSBT5.4	Subtilase family protein (.1)		Lus10008982 [exp]	8.1	0.7738
AT5G20190			Tetratricopeptide repeat (TPR)...		Lus10043266 [exp]	13.0	0.7339
AT3G27110			Peptidase family M48 family pr...		Lus10035210 [exp]	22.6	0.7416
AT5G60900		RLK1	receptor-like protein kinase 1...		Lus10000422 [exp]	25.1	0.7506
AT2G28085			SAUR-like auxin-responsive pro...		Lus10016130 [exp]	31.8	0.7476
AT2G37250		ADK, ATPADK1	adenosine kinase (.1)		Lus10001984 [exp]	33.6	0.6810
					Lus10039897 [exp]	40.9	0.7326
AT5G04870		AK1, ATCPK1, CP...	calcium dependent protein kina...		Lus10029358 [exp]	42.0	0.7327

Compare expression of checked genes

Lus10014111 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.