Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43840 394 / 3e-134 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT2G43820 392 / 2e-133 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT1G05675 387 / 2e-131 UDP-Glycosyltransferase superfamily protein (.1) AT1G05680 385 / 1e-130 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G31790 367 / 2e-123 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 340 / 3e-113 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G24100 330 / 7e-109 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT1G05560 264 / 4e-83 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT4G15480 251 / 7e-78 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1) AT4G15490 250 / 9e-78 UGT84A3 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006353 [exp] 743 / 0 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10017825 [exp] 548 / 0 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006352 [exp] 546 / 0 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 536 / 0 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10024486 [exp] 523 / 0 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10006721 [exp] 518 / 0 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10020556 [exp] 428 / 2e-147 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10010712 [exp] 419 / 8e-144 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10009412 [exp] 414 / 1e-141 AT2G43820 474 / 1e-165 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G175000 [exp] 501 / 5e-176 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.017G032300 [exp] 461 / 2e-160 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.007G140500 [exp] 457 / 1e-158 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.004G179300 [exp] 445 / 4e-154 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G117200 [exp] 438 / 3e-151 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2) Potri.017G032500 [exp] 437 / 5e-151 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 436 / 2e-150 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 434 / 8e-150 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 434 / 8e-150 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 426 / 1e-146 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10014148 pacid=23152916 polypeptide=Lus10014148 locus=Lus10014148.g ID=Lus10014148.BGIv1.0 annot-version=v1.0 ATGGCGGAACACAAAGCCCACTGCTTAATGGTTCCAGTTCCAGGCCAAGGCCACATCACCCCGGTCCTCCAATTCGCCAAGCGCTTAATCCCCAAAGGAA TCCGGGTCACTATCGCCCTGACCCGGTTCATCTCACAAACCGCCACCATCTCCCACACCGCGGGAATCCACCTTGAGACGATCTCCGACGGATTCGACGA CGGCGGCATAGCGGCGGCCGAGGACGGTCAAGTCTACTTCGACACTTTCCGCAAATTCGGTTCCGAAACTCTGGCCGATCTGATCCGTAAACAGATCGAT TCAGGGCATCCTGTGAGTTGCATCCTCTACGATCCTCACCTTCCATGGTGTCTGGACGTTTCCAAGAGGTTTGGCTTAATCGGAGTAGCGTTCTTGACTC AATCATGCACCGTCGATGTCGTCTTCTACCACGTTCACCATGGGTTGCTCAAGCCGCCGGTGACTCAAGTTGAAGAAACAACGTCGATTCCTGGGCCGCC GCCGTTGGATCCTGCTGATTTGCCTTCCTTCGTTCATGATGGATCGTATCCCGCATTTCTCGCCTTGGCTGTTGGTCAATTCTCCAATATTCAGAACGCC GATTGGGTCCTCTGCAACTCTGTTCACGAGCTGGAACCGGAGGCCGCGGACTGGCTCTCGAATCACTTGCCGAATTTCAGAACGATCGGGCCAACACTTC CGTCGTTCTACCTAGACAAGGAATTACCGGACGACAAAGATTATGGACTCAGCTTCTTCAAGCCAGCCAATGAAGCTTGCAGCAAGTGGCTTCAAAGCAA ACCAAAACGGTCCGTTGTGTACGTATCGTTCGGCAGCCTGGCCGATCTAGGACCAGAACATGTTGAGGAACTCTGCTGGGGATTGAAGAACAGCAACCAT TACTTCTTATGGGTAGTCAGATCATCTGAGGAAGCAAAGCTTCCTCAAATGTTTAAGGCTGAAATGGCAGAGAAAGGACTGATCGTGTCATGGTGTTCGC AGCTGGAAGTTCTGACGAGTGGAGCGGTGGGATGCTTCGTAACGCATTGCGGGTGGAATTCGACATTGGAGGCGATGAGCTTGGGAGTGCCGATGGTGGC CATGCCACAATGGAACGACCAAACGACAAATGCTAAGTTCATAATGGATGTGTGGAAGATTGGTGTGAAGGCTGCAGGTGATGAGCATGGAATGGTGGGA AGAGAAGTGATTGAGAAGTGCATAAGGGAAGTAATGGAGGTAGAGAAAGGGGAAGAAATGAGGAGAAATGCTGAGAAATTGAAGAAGTTGATGAAAGATG CAGTTAGTGAAAGTGGAACTTCTCACAGAAACATTACAGAGTTTGCTGCATTCTGTAATCATAGAAACTAA
AA sequence Show only first row Show all	>Lus10014148 pacid=23152916 polypeptide=Lus10014148 locus=Lus10014148.g ID=Lus10014148.BGIv1.0 annot-version=v1.0 MAEHKAHCLMVPVPGQGHITPVLQFAKRLIPKGIRVTIALTRFISQTATISHTAGIHLETISDGFDDGGIAAAEDGQVYFDTFRKFGSETLADLIRKQID SGHPVSCILYDPHLPWCLDVSKRFGLIGVAFLTQSCTVDVVFYHVHHGLLKPPVTQVEETTSIPGPPPLDPADLPSFVHDGSYPAFLALAVGQFSNIQNA DWVLCNSVHELEPEAADWLSNHLPNFRTIGPTLPSFYLDKELPDDKDYGLSFFKPANEACSKWLQSKPKRSVVYVSFGSLADLGPEHVEELCWGLKNSNH YFLWVVRSSEEAKLPQMFKAEMAEKGLIVSWCSQLEVLTSGAVGCFVTHCGWNSTLEAMSLGVPMVAMPQWNDQTTNAKFIMDVWKIGVKAAGDEHGMVG REVIEKCIREVMEVEKGEEMRRNAEKLKKLMKDAVSESGTSHRNITEFAAFCNHRN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G43840		UGT74F1	UDP-glycosyltransferase 74 F1 ...		Lus10014148 [exp]	0	1
AT3G48410			alpha/beta-Hydrolases superfam...		Lus10014191 [exp]	1.7	0.9845
AT2G01340		At17.1	unknown protein		Lus10036005 [exp]	4.5	0.9854
AT1G26910		RPL10B	ribosomal protein L10 B, Ribos...		Lus10034092 [exp]	8.6	0.9854
AT3G12360		ITN1	INCREASED TOLERANCE TO NACL, A...		Lus10023460 [exp]	10.2	0.9710
AT2G32030			Acyl-CoA N-acyltransferases (N...		Lus10010570 [exp]	10.5	0.9741
AT4G37290			unknown protein		Lus10011512 [exp]	12.4	0.9671
AT3G26320		CYP71B36	"cytochrome P450, family 71, s...		Lus10016601 [exp]	13.7	0.9630
AT2G20610		RTY1, RTY, HLS3...	SUPERROOT 1, ROOTY 1, ROOTY, H...		Lus10017703 [exp]	14.0	0.9817
AT5G37490			ARM repeat superfamily protein...		Lus10001079 [exp]	15.4	0.9824
AT1G45063			copper ion binding;electron ca...		Lus10006657 [exp]	15.4	0.9695

Compare expression of checked genes

Lus10014148 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.