Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G06920 102 / 2e-26 OFP ATOFP4, OFP4 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4, ovate family protein 4 (.1) AT5G58360 96 / 8e-24 OFP ATOFP3, OFP3 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 3, ovate family protein 3 (.1) AT2G30400 95 / 2e-23 OFP ATOFP2, OFP2 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 2, ovate family protein 2 (.1) AT5G01840 94 / 2e-23 OFP AtOFP1 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, ovate family protein 1 (.1) AT4G18830 81 / 4e-18 OFP ATOFP5, OFP5 ovate family protein 5 (.1) AT3G52525 69 / 5e-15 OFP ATOFP6, OFP6 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 6, ovate family protein 6 (.1) AT5G19650 70 / 1e-14 OFP ATOFP8, OFP8 ovate family protein 8 (.1) AT2G18500 69 / 6e-14 OFP ATOFP7, OFP7 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 7, ovate family protein 7 (.1) AT2G36026 67 / 8e-14 OFP Ovate family protein (.1) AT2G36030 59 / 6e-12 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006092 [exp] 144 / 9e-42 AT5G01840 121 / 5e-32 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, ovate family protein 1 (.1) Lus10025241 [exp] 138 / 9e-40 AT1G06920 112 / 2e-28 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4, ovate family protein 4 (.1) Lus10008589 [exp] 96 / 1e-23 AT5G01840 120 / 6e-32 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, ovate family protein 1 (.1) Lus10042224 [exp] 96 / 3e-23 AT5G01840 114 / 4e-29 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, ovate family protein 1 (.1) Lus10015236 [exp] 89 / 6e-21 AT4G18830 112 / 1e-27 ovate family protein 5 (.1) Lus10011092 [exp] 83 / 6e-19 AT5G19650 99 / 3e-24 ovate family protein 8 (.1) Lus10043243 [exp] 82 / 2e-18 AT5G19650 105 / 4e-27 ovate family protein 8 (.1) Lus10021302 [exp] 70 / 1e-14 AT3G52525 120 / 2e-34 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 6, ovate family protein 6 (.1) Lus10041730 [exp] 71 / 2e-14 AT2G18500 134 / 3e-37 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 7, ovate family protein 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G134200 [exp] 149 / 3e-43 AT1G06920 117 / 1e-29 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4, ovate family protein 4 (.1) Potri.006G107700 [exp] 147 / 2e-42 AT1G06920 116 / 2e-29 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4, ovate family protein 4 (.1) Potri.019G128500 [exp] 134 / 1e-37 AT1G06920 129 / 2e-34 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4, ovate family protein 4 (.1) Potri.013G155200 [exp] 126 / 2e-34 AT1G06920 130 / 3e-34 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4, ovate family protein 4 (.1) Potri.004G062100 [exp] 97 / 1e-23 AT4G18830 104 / 9e-25 ovate family protein 5 (.1) Potri.006G156176 [exp] 81 / 2e-18 AT5G19650 104 / 8e-27 ovate family protein 8 (.1) Potri.018G080100 [exp] 80 / 5e-18 AT5G19650 107 / 8e-28 ovate family protein 8 (.1) Potri.007G028000 [exp] 75 / 7e-16 AT2G18500 114 / 4e-29 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 7, ovate family protein 7 (.1) Potri.002G262500 [exp] 74 / 1e-15 AT5G19650 94 / 2e-22 ovate family protein 8 (.1) Potri.009G161700 [exp] 71 / 3e-15 AT3G52525 61 / 6e-12 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 6, ovate family protein 6 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04844 [flax] [poplar] Ovate Transcriptional repressor, ovate
Representative CDS sequence Show only first row Show all	>Lus10014164 pacid=23152938 polypeptide=Lus10014164 locus=Lus10014164.g ID=Lus10014164.BGIv1.0 annot-version=v1.0 ATGGTGTCCTCAAGATCAAGCAATAACTCCTGCGGCTGCCCTAACGACATTGTTTATGATAAAATGCATCAACGGGATCTGCTACCCATTTTGACCAAGC CGTCGAGCTTCGACGATAGAATCGAAGGTGTAAAGAAACAGAGGAGCAGCTCGATTCAGAAACCTCTGTCCATTAATGTCGGCAAGGAGCAAAAAGGATC ATCATTTATAAGAAAGCAATCTTCGTCGACGAATTCGCCAGGGATAAAGCTCCGGGTCAAGTCTCCCAGAATTGGGTACATGAGAGTTCAGTCACAGCAG CAAGGAGGAAAAAGCTCGAGTTCGAGTTCTTCCACAAACTCAAACTCGAGCTCGAGCTGTTCTTTTACATCATCGGGGTGTATGGCGGTGGTGAAATCGT CGTCGGATCCACAGCTGGACTTCATGGAGTCGATGGTGGAGATGATTGTGGAGAATAACATTAGCAGGTCCAAAGATTTGGAAGACCTTTTGGCTTGTTA CCTGTGTCTTAATTCGGAAGAGTATCATGATGTTATCATCAAAGTGTTCAAGGAAATATGGTTCGTCCATTTGACCAAACTGTAA
AA sequence Show only first row Show all	>Lus10014164 pacid=23152938 polypeptide=Lus10014164 locus=Lus10014164.g ID=Lus10014164.BGIv1.0 annot-version=v1.0 MVSSRSSNNSCGCPNDIVYDKMHQRDLLPILTKPSSFDDRIEGVKKQRSSSIQKPLSINVGKEQKGSSFIRKQSSSTNSPGIKLRVKSPRIGYMRVQSQQ QGGKSSSSSSSTNSNSSSSCSFTSSGCMAVVKSSSDPQLDFMESMVEMIVENNISRSKDLEDLLACYLCLNSEEYHDVIIKVFKEIWFVHLTKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G06920	OFP	ATOFP4, OFP4	ARABIDOPSIS THALIANA OVATE FAM...		Lus10014164 [exp]	0	1
AT4G24050			NAD(P)-binding Rossmann-fold s...		Lus10017308 [exp]	1.0	0.7936
AT3G23000		PKS7, ATSRPK1, ...	SNF1-RELATED PROTEIN KINASE 3....		Lus10021892 [exp]	3.2	0.7383
AT1G73770			unknown protein		Lus10007968 [exp]	4.1	0.6890
AT4G24050			NAD(P)-binding Rossmann-fold s...		Lus10003204 [exp]	4.6	0.7246
					Lus10012752 [exp]	6.5	0.7538
AT1G44750		ATPUP11	purine permease 11 (.1.2.3)		Lus10043350 [exp]	6.9	0.7249
AT3G15810			Protein of unknown function (D...		Lus10038097 [exp]	8.2	0.7387
AT3G57540			Remorin family protein (.1)		Lus10042367 [exp]	9.1	0.7658
AT3G13850	AS2	LBD22	LOB domain-containing protein ...		Lus10013510 [exp]	15.0	0.6351
AT2G21990			Protein of unknown function, D...		Lus10035847 [exp]	19.7	0.7067

Compare expression of checked genes

Lus10014164 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.