Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G52750 545 / 0 FTSZ2-2 Tubulin/FtsZ family protein (.1) AT2G36250 518 / 0 ATFTSZ2-1, FTSZ2-1 Tubulin/FtsZ family protein (.1.2) AT5G55280 310 / 2e-101 ATFTSZ1-1, CPFTSZ, FTSZ1-1 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021367 [exp] 589 / 0 AT3G52750 607 / 0.0 Tubulin/FtsZ family protein (.1) Lus10017047 [exp] 582 / 0 AT2G36250 597 / 0.0 Tubulin/FtsZ family protein (.1.2) Lus10022718 [exp] 468 / 5e-165 AT3G52750 381 / 3e-131 Tubulin/FtsZ family protein (.1) Lus10016579 [exp] 317 / 2e-104 AT5G55280 535 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10002442 [exp] 273 / 1e-87 AT5G55280 479 / 6e-169 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10035091 [exp] 59 / 7e-09 AT1G75010 559 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1) Lus10031930 [exp] 57 / 3e-08 AT1G75010 549 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1) Lus10022719 [exp] 0 / 1 ND 35 / 3e-06
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G083100 [exp] 535 / 0 AT3G52750 647 / 0.0 Tubulin/FtsZ family protein (.1) Potri.004G203100 [exp] 511 / 9e-180 AT2G36250 613 / 0.0 Tubulin/FtsZ family protein (.1.2) Potri.009G164100 [exp] 459 / 6e-159 AT2G36250 524 / 0.0 Tubulin/FtsZ family protein (.1.2) Potri.001G359500 [exp] 314 / 2e-103 AT5G55280 547 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0566 [flax] [poplar] Tubulin PF00091 [flax] [poplar] Tubulin Tubulin/FtsZ family, GTPase domain CL0442 [flax] [poplar] Tubulin_C PF12327 [flax] [poplar] FtsZ_C FtsZ family, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10014196 pacid=23152877 polypeptide=Lus10014196 locus=Lus10014196.g ID=Lus10014196.BGIv1.0 annot-version=v1.0 ATGGCTTGCGTTTTTCCCTCCGATACAAGAAACCCCGTCGGAATCTTGACGGTTCTCGGTGGCGGGTGGACATCCGGCAGCTCCTCCGTTAAACTCTCTG AGCTCAGTAATAGGTTTCCTGCTGCTAGTCAGAGGTCTCATTTCCCTTCAGTGAGATGCTCGGCAAACAATCGTAATGTCAGTGAGGCTTCCGCCGGTCT GCGTCCTGGAGTTTCGGTTTTGGCCCCGAGGAAGGATTCTCCGAGTGTTGATATCACGGAGAGTTTGGTGGATCAGTCTACTGCTGCCGGTGATTATTTC GGAGCTAAGATCAAAGTGGTTGGTGTTGGAGGTGGTGGATCGAATGCAGTCAATCGTATGATTGAGAGCTCGATGAAGGGAGTGGAGCTCTGGATTGTCA ATACGGATAGTCAAGCCATAAGGATGTCTCCTGTACGTGAGCAGAATCGCTTGCAAATTGGCCGGGAGCTAACTAGAGGTTTGGGAGCTGGTGGTAAACC TGCGATTGGGACAGATGCAGCTAATGAGAGCAAGGAGTCGATTGAAGAAGCATTACGTGGAGCTGATATGGTTTTCGTCACTGCTGGCATGGGTGGAGGG ACTGGTACTGGTGCAGCTCCAGTGATAGCAGGCATTGCAAAAGCTATGGGCATCCTCACAGTTGGTATAGTGACAACCCCTTTTTCTTTTGAGGGACGAA AGAGGGCTATTCAGGCCCATGAAGGAATTGCAGAATTAAGAGAGAATGTTGATACACTGATCGTCATTCCGAATGATAAGTTATTGACTTCTGTATCTGA GTCGACTCCAGTGACAGAAGCATTTAACCTTGCTGATGATATTCTGCGACAGGGAGTTCGTGGTATCTCTGATATCATTACGATTCCAGGACTAGTGAAT GTGGATTTTGCTGATGTCCAGACAATAATGACAAATGCTGGTTCTTCACTGATGGGGATAGGAACGGCAACAGGTCAAACAAGGGCAAGGGATGCGGCCT TAAATGCAATCAAATCGCCATTACTCGATATTGGCATAGAGCGTGCAACTGGAATTGTGTGGACCATTACCGGTGGAACTGATTTGACCTTGTTTGAGGT GAATGCTGCAGCCGAAGTTATATACGATCTCGTAGATCAAACTGCGAATTTGATATTTGGAGCAGTCATTGATGAATCATATACTGGTCAAGTCAGCATA ACTCTTGTTGCAACTGGGTTCAAGCGCCAACAAGAATTGGAAGACAAACCCGTGGAGGCAAGTCAGCAAGCACCAGCATCAAGGGATGGCAAGAACGATG GTGGAATGAACAGGCGACCATTCTCAGTAACCGATGGCGGTTCGGTAGAGATCCCCGAGTACCTAAAAAAGAAGGGCCGTTCTCGGTTTTCAAGATCGTA G
AA sequence Show only first row Show all	>Lus10014196 pacid=23152877 polypeptide=Lus10014196 locus=Lus10014196.g ID=Lus10014196.BGIv1.0 annot-version=v1.0 MACVFPSDTRNPVGILTVLGGGWTSGSSSVKLSELSNRFPAASQRSHFPSVRCSANNRNVSEASAGLRPGVSVLAPRKDSPSVDITESLVDQSTAAGDYF GAKIKVVGVGGGGSNAVNRMIESSMKGVELWIVNTDSQAIRMSPVREQNRLQIGRELTRGLGAGGKPAIGTDAANESKESIEEALRGADMVFVTAGMGGG TGTGAAPVIAGIAKAMGILTVGIVTTPFSFEGRKRAIQAHEGIAELRENVDTLIVIPNDKLLTSVSESTPVTEAFNLADDILRQGVRGISDIITIPGLVN VDFADVQTIMTNAGSSLMGIGTATGQTRARDAALNAIKSPLLDIGIERATGIVWTITGGTDLTLFEVNAAAEVIYDLVDQTANLIFGAVIDESYTGQVSI TLVATGFKRQQELEDKPVEASQQAPASRDGKNDGGMNRRPFSVTDGGSVEIPEYLKKKGRSRFSRS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G52750		FTSZ2-2	Tubulin/FtsZ family protein (....		Lus10014196 [exp]	0	1
AT2G15290		ATTIC21, TIC21,...	PERMEASE IN CHLOROPLASTS 1, CH...		Lus10019814 [exp]	2.2	0.8786
AT2G15290		ATTIC21, TIC21,...	PERMEASE IN CHLOROPLASTS 1, CH...		Lus10014100 [exp]	3.5	0.8447
AT1G59720		CRR28	CHLORORESPIRATORY REDUCTION28,...		Lus10037229 [exp]	3.5	0.8476
AT5G24020		ARC11, ATMIND1,...	ACCUMULATION AND REPLICATION O...		Lus10038843 [exp]	3.9	0.8455
AT4G12060			Double Clp-N motif protein (.1...		Lus10031694 [exp]	4.5	0.8582
AT5G17560			BolA-like family protein (.1)		Lus10020347 [exp]	8.8	0.8377
AT3G59760		ATCS-C, OASC	ARABIDOPSIS THALIANA CYSTEINSY...		Lus10027056 [exp]	12.3	0.8368
AT3G63170			Chalcone-flavanone isomerase f...		Lus10042592 [exp]	12.4	0.8274
AT3G06430		AtPPR2, EMB2750	pentatricopeptide repeat 2, em...		Lus10028683 [exp]	12.8	0.8537
AT1G66670		NCLPP3, NCLPP4,...	CLP protease proteolytic subun...		Lus10010979 [exp]	13.0	0.8228

Compare expression of checked genes

Lus10014196 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.