Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G15770 206 / 2e-69 ATGNA1 glucose-6-phosphate acetyltransferase 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10022713 [exp] 306 / 2e-108 AT5G15770 206 / 4e-69 glucose-6-phosphate acetyltransferase 1 (.1) Lus10029099 [exp] 43 / 3e-05 AT1G26220 239 / 6e-81 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G086400 [exp] 244 / 7e-84 AT5G15770 219 / 9e-74 glucose-6-phosphate acetyltransferase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0257 [flax] [poplar] Acetyltrans PF00583 [flax] [poplar] Acetyltransf_1 Acetyltransferase (GNAT) family
Representative CDS sequence Show only first row Show all	>Lus10014202 pacid=23152859 polypeptide=Lus10014202 locus=Lus10014202.g ID=Lus10014202.BGIv1.0 annot-version=v1.0 ATGCAGGATGATAACTCATCCATTACCAATCAGAGCTTCCAAGTACGCAAATTGCAGATATCAGACAAAACCAAAGGCTTCATCGAGCTCTTACAGCAGC TCAGCGCCTGCGATTCTGTATCGGACAAGGATTTCGAGGAACGGTTCCACGAGCTGACCTCCTACGGGGACGACCATCTCATCTGTGTAATCGAAGATGA CAAAACGGGGAAGATCGTAGCCACGGGCTGTGTGTTCGTGGAGAAGAAGTTCTTGAGGAACTGCGGCAAAGTAGGGCACATTGAGGATGTCGTCGTCGAT TCCAGCGCCAGAGGGTTGCACCTGGGGAAGAAAATCGTGGATTTCCTCACGGATCACGCTCGTTCCAATGGTTGCTACAAGGTGATCCTGGATTGCAGTG ATGGTAACAAGTCGTTCTATGAGAAGTGTGGGTTCAAGCAGAAGGAGATCCAGATGGTTCAATATTTCGTCTGA
AA sequence Show only first row Show all	>Lus10014202 pacid=23152859 polypeptide=Lus10014202 locus=Lus10014202.g ID=Lus10014202.BGIv1.0 annot-version=v1.0 MQDDNSSITNQSFQVRKLQISDKTKGFIELLQQLSACDSVSDKDFEERFHELTSYGDDHLICVIEDDKTGKIVATGCVFVEKKFLRNCGKVGHIEDVVVD SSARGLHLGKKIVDFLTDHARSNGCYKVILDCSDGNKSFYEKCGFKQKEIQMVQYFV

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G15770		ATGNA1	glucose-6-phosphate acetyltran...		Lus10014202 [exp]	0	1
AT2G20140		RPT2b	regulatory particle AAA-ATPase...		Lus10022834 [exp]	43.6	0.6468
AT4G30010			unknown protein		Lus10001623 [exp]	74.5	0.5953
AT1G07250		UGT71C4	UDP-glucosyl transferase 71C4 ...		Lus10010475 [exp]	99.0	0.6259
AT1G79800		AtENODL7	early nodulin-like protein 7 (...		Lus10024846 [exp]	104.3	0.5657
					Lus10007551 [exp]	130.9	0.5982
AT5G18110		NCBP	novel cap-binding protein (.1)		Lus10020282 [exp]	226.0	0.5798

Compare expression of checked genes

Lus10014202 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.