Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G56980 68 / 3e-13 unknown protein AT2G26110 64 / 9e-12 Protein of unknown function (DUF761) (.1) AT4G26130 60 / 2e-10 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025985 [exp] 218 / 2e-71 AT5G56980 82 / 4e-18 unknown protein Lus10019517 [exp] 66 / 2e-12 AT2G26110 148 / 5e-43 Protein of unknown function (DUF761) (.1) Lus10026978 [exp] 63 / 5e-12 AT2G26110 122 / 2e-33 Protein of unknown function (DUF761) (.1) Lus10024988 [exp] 63 / 1e-11 AT2G26110 172 / 1e-51 Protein of unknown function (DUF761) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G228800 [exp] 70 / 7e-14 AT2G26110 142 / 5e-40 Protein of unknown function (DUF761) (.1) Potri.006G152200 [exp] 59 / 3e-10 AT5G56980 103 / 2e-25 unknown protein Potri.018G053000 [exp] 59 / 3e-10 AT2G26110 167 / 2e-49 Protein of unknown function (DUF761) (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10014282 pacid=23164735 polypeptide=Lus10014282 locus=Lus10014282.g ID=Lus10014282.BGIv1.0 annot-version=v1.0 ATGTGGACTTCCGTCGCCGAATTGGTGACCCCGTCGTCACTTTTCCTCCTCCTCAACCTCACCATCGCCGCAATCGCTCTCACTTCCAGGAAGAATAACC AATCCCTCGAATCATCATCAGAACATCAGATTGGCCTGGAGCGGGTTCCTTCACTTCTCGAAAGAGTCCGCTCTGTCAATTTGTACTCCATGTACAGCTT CTCATCATCCCTGTCCGAAATCGAAACCACTCTCCCAGCCACTCCTAGGGCGGCGGCACTACAGAGGACCTCCTCCTCCTCCTCCTCTCTCATCTTCAAA TCGCTCCCCAAATCCAGAAATGTACCGGATCGTATTGACCCGGTCCGTCCTCGGGATGATCAGGTGGTGGTCAAGCGGATTAAGTCAGAGACGGCGGTCG GGGAAGGGGAATTAGTTAGGAGGAAGAAGATGAGGAAATCGGCCAGCGAGAAATGCGTAGGGGAGGTGTTGACGACGAAGACGACGGTGGCGGACAAGGA GGAGGAAGGGATAAGGGATCGGTTGGAGAAGCGGCGTCCGGCGACTGTGAGGCTTCAGAAGGCGGTGTCTATTGGAGACGACCACGGAGGAGTTGACTCC AAGGCTGACGATTTCATTAACAGGTTCAAGCAGCAGCTCAAGTTGCAGAGGGTCGACTCTCTGCTGCGGAGGAAACAACTTCTGAAAGCCCGCGCCTTAC AACATACGTAA
AA sequence Show only first row Show all	>Lus10014282 pacid=23164735 polypeptide=Lus10014282 locus=Lus10014282.g ID=Lus10014282.BGIv1.0 annot-version=v1.0 MWTSVAELVTPSSLFLLLNLTIAAIALTSRKNNQSLESSSEHQIGLERVPSLLERVRSVNLYSMYSFSSSLSEIETTLPATPRAAALQRTSSSSSSLIFK SLPKSRNVPDRIDPVRPRDDQVVVKRIKSETAVGEGELVRRKKMRKSASEKCVGEVLTTKTTVADKEEEGIRDRLEKRRPATVRLQKAVSIGDDHGGVDS KADDFINRFKQQLKLQRVDSLLRRKQLLKARALQHT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G56980			unknown protein		Lus10014282 [exp]	0	1
AT1G07890		ATAPX01, CS1, A...	maternal effect embryo arrest ...		Lus10015970 [exp]	1.0	0.8780
AT1G23390			Kelch repeat-containing F-box ...		Lus10029127 [exp]	5.3	0.8689
AT4G18700		ATWL4, CIPK12, ...	SNF1-RELATED PROTEIN KINASE 3....		Lus10029231 [exp]	7.1	0.8419
AT2G19570		DESZ, AT-CDA1, ...	cytidine deaminase 1 (.1)		Lus10018355 [exp]	10.8	0.8295
AT1G67370		ASY1, ATASY1	ASYNAPTIC 1, DNA-binding HORMA...		Lus10015786 [exp]	12.0	0.8228
AT2G19570		DESZ, AT-CDA1, ...	cytidine deaminase 1 (.1)		Lus10007654 [exp]	12.0	0.8343
AT2G21100			Disease resistance-responsive ...		Lus10025063 [exp]	14.5	0.8535
AT4G28270		ATRMA2	RING membrane-anchor 2 (.1)		Lus10031641 [exp]	15.0	0.8467
AT4G13510		ATAMT1;1, AMT1;...	ARABIDOPSIS THALIANA AMMONIUM ...		Lus10023705 [exp]	15.6	0.8279
AT5G13810			Glutaredoxin family protein (....		Lus10039537 [exp]	16.4	0.8357

Compare expression of checked genes

Lus10014282 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.