Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G18245 194 / 4e-58 alpha/beta-Hydrolases superfamily protein (.1) AT3G19970 181 / 1e-52 alpha/beta-Hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026001 [exp] 553 / 0 AT2G18245 283 / 2e-92 alpha/beta-Hydrolases superfamily protein (.1) Lus10017376 [exp] 171 / 1e-48 AT3G19970 534 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Lus10010171 [exp] 167 / 2e-47 AT3G19970 528 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Lus10041762 [exp] 138 / 1e-39 AT2G18245 102 / 1e-26 alpha/beta-Hydrolases superfamily protein (.1) Lus10028314 [exp] 0 / 1 AT2G18245 216 / 1e-67 alpha/beta-Hydrolases superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G023000 [exp] 265 / 3e-85 AT2G18245 330 / 2e-110 alpha/beta-Hydrolases superfamily protein (.1) Potri.007G075400 [exp] 176 / 7e-51 AT3G19970 514 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Potri.005G089000 [exp] 174 / 4e-50 AT3G19970 509 / 5e-180 alpha/beta-Hydrolases superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF05705 [flax] [poplar] DUF829 Eukaryotic protein of unknown function (DUF829)
Representative CDS sequence Show only first row Show all	>Lus10014294 pacid=23164654 polypeptide=Lus10014294 locus=Lus10014294.g ID=Lus10014294.BGIv1.0 annot-version=v1.0 ATGGAAGGTTACGTGGCAGCGAGAGTTTTCAACCGGCAGGTTCTCTTGAAATCCACCAATTTTCTCAGACCTGAGAATCCTCGATATAATCGCTCCAGCG CCATTGTTCGTGCTGCCCTAATCACTCCTCCGAATTCACGACCTCCTATCAATCTCTTCCTCTCGCTTTCATCTTCTCATCTCTGCAACCCGTCGATTCA CCGTTTGGGAAATTGGAGCAGTGTTCAATCGAACTCGAAGGAGGAGGTTTTATTCCGCTGGCATCCAGCTCCTGAAACTGGCATCAATGGACAACGGAGT CTTCTGCTGGGACCGAGAGATCCGGTAACGATGGTGGTATTGCTGGGGTGGCTGGGAGCGAAGCAGAAGCACCTCAGGAAGTACGTGGAGTGGTACAACT CGCTAGGGATCCACGCGATTACCTTCGTTGTTGATGTTGGAGAGTTGCTTCGTTTCGATTTGGGACACAGGGTGGAGAAACGGATCTCTGCTCTCGCCAG CGAGCTTGTTTCCTGGCTCGGCGAGAGTGAAAAAGAAGATGGCCGAGAGCGTTGTTTGCTGTTCCACACTTTCAGCAACACTGGTTTTCTGACGTATGGC TACATTCTTGACATTCTGCAAGGTAGAGAAAGTGTGGCGGACAAGGTCAGAGGCTGCATTGTTGATTCAGGTGGTGCTGGGCTGCTGGATCATAAGGTCT GGGCTGCTGGGTTTGGTGCAGCTATCTTGAAGAAACGCAGCTCCGCTGTAACATTTCCAGAAGATGAATCCAGCAACCGCAAACAATTCAACAGTGAAGT CAGTGATAATCAACCTAATGTAACTGAAACGGTAGTACTGGGAGCACTGGAGATGTTCTTTTCTGTTGTCCTCAAGTTTCCTCAAGTTGATAGGCAAGAA GTTGCAGAAGATTGTAGCTGCAGTCTCGAAGAACCAGCCTTCTTATCCTCATCTTTACATGTACAGTACCGGAGACAAAGTCGTCCCACACGAGGGGATC GAAGCTGCAATACAGGAGGAATTAAGGAAGGGAAGAAAGGTTGTCAGCCACAATTTTGGATCGTCCCCACATGTCGATCACTACCGGACATTCCCAGATC AGTATCTATCGGTCCTTTCCAGATTTTTGAAAGATGCTTGTCGAATGCCAAAGTAGCAGACATGAAAAACTAA
AA sequence Show only first row Show all	>Lus10014294 pacid=23164654 polypeptide=Lus10014294 locus=Lus10014294.g ID=Lus10014294.BGIv1.0 annot-version=v1.0 MEGYVAARVFNRQVLLKSTNFLRPENPRYNRSSAIVRAALITPPNSRPPINLFLSLSSSHLCNPSIHRLGNWSSVQSNSKEEVLFRWHPAPETGINGQRS LLLGPRDPVTMVVLLGWLGAKQKHLRKYVEWYNSLGIHAITFVVDVGELLRFDLGHRVEKRISALASELVSWLGESEKEDGRERCLLFHTFSNTGFLTYG YILDILQGRESVADKVRGCIVDSGGAGLLDHKVWAAGFGAAILKKRSSAVTFPEDESSNRKQFNSEVSDNQPNVTETVVLGALEMFFSVVLKFPQVDRQE VAEDCSCSLEEPAFLSSSLHVQYRRQSRPTRGDRSCNTGGIKEGKKGCQPQFWIVPTCRSLPDIPRSVSIGPFQIFERCLSNAKVADMKN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G18245			alpha/beta-Hydrolases superfam...		Lus10014294 [exp]	0	1
AT4G27250			NAD(P)-binding Rossmann-fold s...		Lus10021294 [exp]	13.1	0.7474
AT5G19670			Exostosin family protein (.1)		Lus10043239 [exp]	14.0	0.7936
AT3G25060			Tetratricopeptide repeat (TPR)...		Lus10025915 [exp]	15.0	0.7724
AT2G43940		ATHOL3, HOL3	HARMLESS TO OZONE LAYER 3, S-a...		Lus10027086 [exp]	20.5	0.7851
AT3G56160			Sodium Bile acid symporter fam...		Lus10043443 [exp]	29.3	0.7684
AT3G16190			Isochorismatase family protein...		Lus10037581 [exp]	33.8	0.7604
AT1G60560			SWIM zinc finger family protei...		Lus10035898 [exp]	37.8	0.7560
AT2G44850			unknown protein		Lus10042906 [exp]	49.9	0.7376
AT2G45330		TRPT, EMB1067	2' tRNA phosphotransferase, em...		Lus10009289 [exp]	63.8	0.7448
AT3G14630		CYP72A9	"cytochrome P450, family 72, s...		Lus10019188 [exp]	69.7	0.7470

Compare expression of checked genes

Lus10014294 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.