Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G25737 384 / 3e-129 Sulfite exporter TauE/SafE family protein (.1) AT2G36630 253 / 7e-79 Sulfite exporter TauE/SafE family protein (.1) AT1G11540 96 / 2e-21 Sulfite exporter TauE/SafE family protein (.1) AT1G61740 91 / 2e-19 Sulfite exporter TauE/SafE family protein (.1) AT4G21250 89 / 7e-19 Sulfite exporter TauE/SafE family protein (.1) AT4G21260 72 / 3e-13 Sulfite exporter TauE/SafE family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026025 [exp] 689 / 0 AT2G25737 533 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10011682 [exp] 402 / 2e-136 AT2G25737 632 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10011683 [exp] 257 / 2e-80 AT2G25737 444 / 9e-154 Sulfite exporter TauE/SafE family protein (.1) Lus10029813 [exp] 249 / 3e-77 AT2G36630 612 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10020733 [exp] 248 / 8e-77 AT2G36630 611 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Lus10022133 [exp] 80 / 4e-18 AT2G25737 106 / 2e-28 Sulfite exporter TauE/SafE family protein (.1) Lus10020068 [exp] 86 / 1e-17 AT1G61740 371 / 2e-125 Sulfite exporter TauE/SafE family protein (.1) Lus10022134 [exp] 80 / 7e-17 AT2G25737 168 / 8e-50 Sulfite exporter TauE/SafE family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G124200 [exp] 488 / 3e-170 AT2G25737 453 / 1e-156 Sulfite exporter TauE/SafE family protein (.1) Potri.007G026800 [exp] 480 / 5e-167 AT2G25737 434 / 2e-149 Sulfite exporter TauE/SafE family protein (.1) Potri.006G242100 [exp] 401 / 5e-136 AT2G25737 568 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.003G053000 [exp] 384 / 3e-129 AT2G25737 501 / 2e-175 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037400 [exp] 372 / 1e-124 AT2G25737 535 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.018G037500 [exp] 359 / 1e-119 AT2G25737 529 / 0.0 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183300 [exp] 330 / 2e-108 AT2G25737 381 / 2e-128 Sulfite exporter TauE/SafE family protein (.1) Potri.001G183400 [exp] 324 / 3e-106 AT2G25737 418 / 5e-143 Sulfite exporter TauE/SafE family protein (.1) Potri.001G182700 [exp] 317 / 3e-103 AT2G25737 428 / 6e-147 Sulfite exporter TauE/SafE family protein (.1) Potri.006G117900 [exp] 263 / 1e-82 AT2G36630 578 / 0.0 Sulfite exporter TauE/SafE family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0292 [flax] [poplar] LysE PF01925 [flax] [poplar] TauE Sulfite exporter TauE/SafE
Representative CDS sequence Show only first row Show all	>Lus10014316 pacid=23164742 polypeptide=Lus10014316 locus=Lus10014316.g ID=Lus10014316.BGIv1.0 annot-version=v1.0 ATGACGAAGCTTAGCAAGAGATCAGTTGCAGCCTTGCTGATAGTTGCTTGGCTGCTCACACTCAGAGCCATAGCTACTGCAGCTGATAGATTGTTAAGAG ACAACAACAAAAACAACAACAATGACACTCATGAAGAGATTGTGCAAAGCAGTCATTTCCTGTTAGATCAAGTTGCTCATTTCCTCTGGCAGAGTGGCAA ATCCTCCTATGACCCTGTCTGGCCTGAAATGGATTTGAACTGGAAGATTGTGGTGGGAACAATAGTAGGCTTCTTTGGTGCTGCATTTGGGAGTGTTGGA GGGGTTGGAGGTGGTGGCATTTTCGTTCCGATGCTCACTTTGATCGTCGGATTCGATCCCAAGTCTTCCACAGCTATTTCCAAGTGCATGATCATGGGTG CAGCAGGGTCAACGGTTTACTACAACCTAAGACTGAGACATCCAACGTTGGACATGCCCCTAATTGACTATGATCTGGCCCTTCTGTTTCAGCCAATGTT GATGCTTGGAATCAGCATTGGGGTTGCCTTCAATGTCATGTTTGCTGACTGGATGGTCACTGTTCTTCTTATCATCCTCTTTGTAGGGACATCAACAAAG GCTTTGTTCAAAGGGATAGAAACATGGAAGAAGGAAACAATGATGAAGAGGGAAGCAGCAGCCATGCTACCAAAACTGCAAGTTGATCAGAATGATAATA ATGGTGGTGGAGAAGAAGACTACAAGAGGCTGCCAAGTGGCCCTGCAGCTCTTCAAGATCATGATGAAGAAGTTTCCTTTCTGCACAACATATACTGGAA AGAGCTTGCAATGCTTATTTATGTTTGGGTTGGATTCCTCCTAGTTCAGATAGTTAAGACATATGTTGGTACATGCTCTGTCACATACTGGATCTTGAAT GCATTGCAGATACCAATTGCAGTATCAGTAACAGCATTTGAAGCACTCTGCCTGTGCAAAGGAACAAGGATCATCGCTTCCATAGGGAAGCAAGAAGCGG CAAAACACTGGAAGATGCATCAGATATTGGGCTTCTGTAGCTGCGGGATTGTGGCCGGAATGGTCGGCGGGCTTCTTGGGCTGGGCGGTGGGTTCATCTT GGGCCCACTATTTCTCGAGCTCGGAATTCCTCCACAGGTGGCGAGTGCCACATCGACGTTCGCGATGGCATTCTCGTCGTCGATGTCGGTCGTCCAATAC TACCTCCTCCGCCGATTTCCAGTTCCCTACGCAGCGTATTTTGCAGCGGTGGCGACCATGGCGGCGTTGGTCGGGCAGCATGTGGTGAGGAGGATAATTG GAGTCGTCGGGAGGGCATCGATCGTAATTTTCATACTGGCTTTGACCATTTTCGTGAGCGCGGTCAGCTTGGGTGGAGTTGGGATTGCTAATATGGTTGA GAAGTTACAGAAGGAAGAGTACATGGGGTTTGACAGTTTCTGCCCCAGCCGTTGA
AA sequence Show only first row Show all	>Lus10014316 pacid=23164742 polypeptide=Lus10014316 locus=Lus10014316.g ID=Lus10014316.BGIv1.0 annot-version=v1.0 MTKLSKRSVAALLIVAWLLTLRAIATAADRLLRDNNKNNNNDTHEEIVQSSHFLLDQVAHFLWQSGKSSYDPVWPEMDLNWKIVVGTIVGFFGAAFGSVG GVGGGGIFVPMLTLIVGFDPKSSTAISKCMIMGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFVGTSTK ALFKGIETWKKETMMKREAAAMLPKLQVDQNDNNGGGEEDYKRLPSGPAALQDHDEEVSFLHNIYWKELAMLIYVWVGFLLVQIVKTYVGTCSVTYWILN ALQIPIAVSVTAFEALCLCKGTRIIASIGKQEAAKHWKMHQILGFCSCGIVAGMVGGLLGLGGGFILGPLFLELGIPPQVASATSTFAMAFSSSMSVVQY YLLRRFPVPYAAYFAAVATMAALVGQHVVRRIIGVVGRASIVIFILALTIFVSAVSLGGVGIANMVEKLQKEEYMGFDSFCPSR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G25737			Sulfite exporter TauE/SafE fam...		Lus10014316 [exp]	0	1
AT2G28470		BGAL8	beta-galactosidase 8 (.1.2)		Lus10006733 [exp]	1.7	0.9548
AT5G55390		EDM2	ENHANCED DOWNY MILDEW 2 (.1.2)		Lus10002269 [exp]	3.7	0.9478
					Lus10010102 [exp]	4.7	0.8829
					Lus10021271 [exp]	6.0	0.8742
AT3G49950	GRAS		GRAS family transcription fact...		Lus10018498 [exp]	7.2	0.9236
					Lus10006808 [exp]	7.3	0.8888
AT3G05470			Actin-binding FH2 (formin homo...		Lus10004505 [exp]	8.5	0.9252
AT1G68780			RNI-like superfamily protein (...		Lus10038948 [exp]	14.9	0.8431
AT3G61250	MYB	LMI2, ATMYB17	LATE MERISTEM IDENTITY2, myb d...		Lus10039214 [exp]	15.5	0.8848
AT1G11600		CYP77B1	"cytochrome P450, family 77, s...		Lus10007660 [exp]	16.1	0.9045

Compare expression of checked genes

Lus10014316 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.