Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G66740 642 / 0 Protein of unknown function (DUF620) (.1) AT2G18480 638 / 0 AtPLT3 Major facilitator superfamily protein (.1) AT4G36670 625 / 0 AtPMT6, AtPLT6 polyol/monosaccharide transporter 6, polyol transporter 6, Major facilitator superfamily protein (.1) AT3G18830 558 / 0 ATPMT5, AtPLT5 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) AT2G16120 526 / 3e-179 ATPMT1, AtPLT1 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 1, polyol/monosaccharide transporter 1 (.1) AT2G16130 525 / 2e-178 ATPMT2, AtPLT2 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 2, polyol/monosaccharide transporter 2 (.1) AT1G75160 405 / 1e-133 Protein of unknown function (DUF620) (.1) AT2G20780 405 / 5e-132 AtPLT4 Major facilitator superfamily protein (.1) AT5G05840 388 / 1e-126 Protein of unknown function (DUF620) (.1) AT3G55720 330 / 3e-104 Protein of unknown function (DUF620) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026032 [exp] 964 / 0 AT4G36670 645 / 0.0 polyol/monosaccharide transporter 6, polyol transporter 6, Major facilitator superfamily protein (.1) Lus10041731 [exp] 789 / 0 AT4G36670 664 / 0.0 polyol/monosaccharide transporter 6, polyol transporter 6, Major facilitator superfamily protein (.1) Lus10026031 [exp] 754 / 0 AT5G66740 643 / 0.0 Protein of unknown function (DUF620) (.1) Lus10040482 [exp] 556 / 0 AT3G18830 722 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Lus10011288 [exp] 553 / 0 AT3G18830 721 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Lus10042339 [exp] 550 / 0 AT3G18830 735 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Lus10035255 [exp] 528 / 2e-179 AT3G18830 656 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Lus10034623 [exp] 522 / 2e-177 AT3G18830 652 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Lus10006971 [exp] 521 / 5e-177 AT3G18830 631 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G027900 [exp] 688 / 0 AT4G36670 638 / 0.0 polyol/monosaccharide transporter 6, polyol transporter 6, Major facilitator superfamily protein (.1) Potri.007G027800 [exp] 646 / 0 AT5G66740 645 / 0.0 Protein of unknown function (DUF620) (.1) Potri.009G113600 [exp] 576 / 0 AT3G18830 717 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Potri.004G152300 [exp] 547 / 0 AT3G18830 625 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Potri.004G151725 [exp] 535 / 0 AT3G18830 640 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Potri.002G262400 [exp] 452 / 2e-152 AT1G75160 541 / 0.0 Protein of unknown function (DUF620) (.1) Potri.014G181500 [exp] 449 / 7e-151 AT1G75160 533 / 0.0 Protein of unknown function (DUF620) (.1) Potri.006G158700 [exp] 427 / 8e-141 AT3G18830 477 / 6e-165 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Potri.008G062500 [exp] 422 / 6e-140 AT5G05840 614 / 0.0 Protein of unknown function (DUF620) (.1) Potri.010G195200 [exp] 412 / 6e-136 AT5G05840 600 / 0.0 Protein of unknown function (DUF620) (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04788 [flax] [poplar] DUF620 Protein of unknown function (DUF620) CL0015 [flax] [poplar] MFS PF00083 [flax] [poplar] Sugar_tr Sugar (and other) transporter
Representative CDS sequence Show only first row Show all	>Lus10014323 pacid=23164652 polypeptide=Lus10014323 locus=Lus10014323.g ID=Lus10014323.BGIv1.0 annot-version=v1.0 ATGGTGGCGATGGAGCAGAAGGAGGAATTCAATTTCTACGCAGCTGCATGCGCCATAGTTGCTTCCATTATATCCATCATCTTTGGATATGATACAGGAG TGATGAGCGGAGCAATGATCTTCATCAAAGATGATCTCAAAATCAACGACACACAAGTAGAAGTCCTCGCCGGAATCCTCAACCTCTGCGCCCTGGTCGG CTCGTTGCTCGGCGGCAGAATTTCCGATTACATAGGCCGGAAATACACAATCGCCATGGCGTCCATCATTTTCCTAATCGGGTCGGTCTTCATGGGCTGG GGACCCAACTACGCCATCCTCATGACCGGTAGGTGCGTCGCCGGAGTCGGCGTCGGATTCGCCCTCATGATAGCTCCCGTCTACTCCGCCGAGATCTCCT CCGCTCGTTCCAGAGGATTCCTAACCTCACTTCCTGAGTGGGGGGTCAGCATCGGAATCCTCCTCGGCTACATATCCAACGTCATCTTCGCCAAGCTTCC CTTGAAACTCGGCTGGCGGTTGATGATCGGAATCGCCGCGATTCCTTCGCTGATTTTATCACTCGCCATCTCCAAAATGCCAGAATCGCCGCGGTGGCTG GTTATGCAGGGGAAATTAGGGGAAGCGAAGAGGATTCTGCTGTTGGTATCCAATTCCAAGGAGGAAGCCGAGAATCGGTTCAGAGAAATCAAAATCGCCG CCGGTATCGATCCAAACTGCCAGGAATTGACGGTTAAGATTCAGAATAAGAATGAATCGAGAGGCAAAGGCGTTTGGAAGGAGCTTATTGTACGGCCGAC TCCGGCAGTACGGACGATTCTTATCGCGGCGATCGGAATACATTTCTTCGAACACGCGGTGGGCACGGAGGCGGTTGTGCTGTACAGTCCGAGAATCTTC GAGAAGGCGGGAATCGTCGACAAGCACAAGCTCCTGTTGGCGACGGTCGGCGTCGGGCTGACGAAATTCACTTTCATCGTCATCGCAACGTTTCTTTTGG ATCGGGTCGGGCGACGGAGCCTGCTATTGTTCAGCACGACCGGGGTGATCGCGGCGTTGACCTTATTGGGGACTTCTTTGACTATAGTGGAGAGGAGGGA AAAAAGCGGGGAGGAGAAGATGATGTGGGCCCTGGGGATGAGTATAGCGTCCGCTTACGGGTTCGTCGCGTTCGTTAACATTGGGTTGGCACCCGTGACG TGGGTTTATAGCTCCGAGATTTTTCCGACGAGGTTGAGGGCTCAAGGGTACGGTATGGGAGTGGCAATGAATAGGTTGATGAACGCGGTGATTTCAATGA CGTTTATTTCGTTGTATAAGGCGATCACGATCGGGGGCGCGTTCTTCCTGTTTGCAGGGGTCTCGGCAGTGGCGTGGTTTTTCTTCTATTTCGTATTTCC GGAGACGAAAGGGAGGTCGTTGGAGGAGATGGAGGAGCTGTTTGGGAATGGATTTAAGTCGGGTTTGAAACAGAGCAAAGTGCAAGCTCAGGATCAAGGC AAGTGTCTTCAGATGAGGAAATTGTGCCCAAACATCGACAGAGACGACGGCCTCGAGACCGTTCTCGAGGTCCCCATCCCTGAAGAAATGTTCACCGGCA TGGGAAACAACACCACCTTGCGTTTACAGAACATGCTCACTTGGATGAGAGCACAACCTTCCGATAAATGGTCACAGCCCGTCATCGCCAGCCGGATCAA CGAGCTCCGCTTCCTTCTCTACTTGGTTGGATCCCCTCTCATCCCTCTTCAGGTTCAGGTCGGCCACGCCGTCCACAAGGCCGTCCGGGATTCCTCCATC CAAGCGTCGACGGCCAAGTACATAGTGCAACAGTACATAGCGGCAACGGGAGGGCAGCCGGTGCTGAACACGGTGCACAGCATGTGCGTGATTGGGGCGG TGAAGATAAGCGCGTCGGAGTTTCACCAAGGGGATCAGACGATAAACGTGAAGAACACGGAGGAAAACGGCGGGTTCGTACTGTGGCAGAAAGATCCGGA TTTGTGGATATTGGAGCTGGTGGTTTCCGGGTGTAAAGTTATATGCGGAAGCAACGGGAAGGTCTCTTGGAGGCATTCTTCTAACCAACAAACTCCCATT TCTAGAGGATCTCCCCGCCCTCTCCGTCGCTTTCTCCAGGGATTGGACCCAAGATCGACAGCAAACCTATTCAGCGACGCAACATGCATAGGCGAGAAGA TAATAAACAACGAAGACTGCTTCATCCTCAAGCTCGAAACCAGCCCCGCAATCAGGGAGGCGCAGAGCGGTCCGAACTGCGAGATAATCCACCACACCAT ATGGGGATACTTCAGCCAGAGGTCGGGTCTCCTGGTCCAGTTCGAGGACTCGAGGCTGCTGCGAATGAGGACCAAAGACGACTACGACGTGTTCTGGGAG ACCAGCATGGAGTCGGTCATCGAAGAGTACAGGTACGTCGATGGGGTCAACATTGCGCACAGCGGGAAAACTCGGGTTACCGTTTACCGGTACGGCGAGC AGTCGGCGAACCACAAGCGGGAGATACGCGAGAGTTGGAAGATCGATGAGGTTAATTTCAATGTCTGGGGGTTAAGTGCTGATTATTTTTTGCCTCCTTC TGATTTGGACCTTAGTAGTAGTAATGATCAGAAGCTAAGGTGA
AA sequence Show only first row Show all	>Lus10014323 pacid=23164652 polypeptide=Lus10014323 locus=Lus10014323.g ID=Lus10014323.BGIv1.0 annot-version=v1.0 MVAMEQKEEFNFYAAACAIVASIISIIFGYDTGVMSGAMIFIKDDLKINDTQVEVLAGILNLCALVGSLLGGRISDYIGRKYTIAMASIIFLIGSVFMGW GPNYAILMTGRCVAGVGVGFALMIAPVYSAEISSARSRGFLTSLPEWGVSIGILLGYISNVIFAKLPLKLGWRLMIGIAAIPSLILSLAISKMPESPRWL VMQGKLGEAKRILLLVSNSKEEAENRFREIKIAAGIDPNCQELTVKIQNKNESRGKGVWKELIVRPTPAVRTILIAAIGIHFFEHAVGTEAVVLYSPRIF EKAGIVDKHKLLLATVGVGLTKFTFIVIATFLLDRVGRRSLLLFSTTGVIAALTLLGTSLTIVERREKSGEEKMMWALGMSIASAYGFVAFVNIGLAPVT WVYSSEIFPTRLRAQGYGMGVAMNRLMNAVISMTFISLYKAITIGGAFFLFAGVSAVAWFFFYFVFPETKGRSLEEMEELFGNGFKSGLKQSKVQAQDQG KCLQMRKLCPNIDRDDGLETVLEVPIPEEMFTGMGNNTTLRLQNMLTWMRAQPSDKWSQPVIASRINELRFLLYLVGSPLIPLQVQVGHAVHKAVRDSSI QASTAKYIVQQYIAATGGQPVLNTVHSMCVIGAVKISASEFHQGDQTINVKNTEENGGFVLWQKDPDLWILELVVSGCKVICGSNGKVSWRHSSNQQTPI SRGSPRPLRRFLQGLDPRSTANLFSDATCIGEKIINNEDCFILKLETSPAIREAQSGPNCEIIHHTIWGYFSQRSGLLVQFEDSRLLRMRTKDDYDVFWE TSMESVIEEYRYVDGVNIAHSGKTRVTVYRYGEQSANHKREIRESWKIDEVNFNVWGLSADYFLPPSDLDLSSSNDQKLR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G66740			Protein of unknown function (D...		Lus10014323 [exp]	0	1
AT5G24600			Protein of unknown function, D...		Lus10005272 [exp]	1.0	0.9042
AT5G13220	ZIM	JAS1, TIFY9, JA...	TIFY DOMAIN PROTEIN 9, JASMONA...		Lus10002576 [exp]	7.9	0.8199
AT1G14185			Glucose-methanol-choline (GMC)...		Lus10030463 [exp]	10.0	0.8302
AT5G25930			Protein kinase family protein ...		Lus10034976 [exp]	15.9	0.7797
AT5G36220		CYP91A1, CYP81D...	CYTOCHROME P450 91A1, cytochro...		Lus10011958 [exp]	20.0	0.8478
AT2G05940		RIPK	RPM1-induced protein kinase, P...		Lus10033429 [exp]	25.5	0.8466
AT4G31500		SUR2, RNT1, RED...	SUPERROOT 2, RUNT 1, RED ELONG...		Lus10034502 [exp]	31.9	0.8076
AT5G38960			RmlC-like cupins superfamily p...		Lus10006550 [exp]	32.4	0.7891
AT3G02645			Plant protein of unknown funct...		Lus10033668 [exp]	33.2	0.7462
					Lus10041755 [exp]	35.7	0.7555

Compare expression of checked genes

Lus10014323 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.