Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G10120 348 / 1e-115 EIL Ethylene insensitive 3 family protein (.1) AT5G65100 335 / 2e-109 EIL Ethylene insensitive 3 family protein (.1) AT2G27050 323 / 2e-104 EIL AtEIL1, EIL1 ETHYLENE-INSENSITIVE3-like 1 (.1) AT3G20770 312 / 2e-99 EIL AtEIN3, EIN3 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) AT1G73730 295 / 6e-94 EIL AtEIL3, ATSLIM, SLIM1, EIL3 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) AT5G21120 257 / 1e-79 EIL EIL2 ETHYLENE-INSENSITIVE3-like 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041709 [exp] 471 / 4e-163 AT5G65100 358 / 6e-119 Ethylene insensitive 3 family protein (.1) Lus10031817 [exp] 293 / 1e-92 AT1G73730 555 / 0.0 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) Lus10031245 [exp] 290 / 2e-91 AT1G73730 556 / 0.0 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) Lus10024040 [exp] 84 / 6e-19 AT5G10120 45 / 7e-06 Ethylene insensitive 3 family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G197400 [exp] 319 / 2e-102 AT3G20770 724 / 0.0 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) Potri.008G011300 [exp] 317 / 7e-101 AT3G20770 560 / 0.0 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) Potri.010G247500 [exp] 311 / 1e-98 AT3G20770 578 / 0.0 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) Potri.009G159200 [exp] 310 / 2e-98 AT3G20770 704 / 0.0 ETHYLENE-INSENSITIVE3, Ethylene insensitive 3 family protein (.1) Potri.001G015900 [exp] 300 / 4e-95 AT1G73730 494 / 8e-170 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) Potri.003G210500 [exp] 290 / 3e-91 AT1G73730 516 / 5e-178 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1) Potri.001G015966 [exp] 0 / 1 AT1G73730 239 / 6e-76 ARABIDOPSIS THALIANA SULFUR LIMITATION 1, ETHYLENE-INSENSITIVE3-like 3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04873 [flax] [poplar] EIN3 Ethylene insensitive 3
Representative CDS sequence Show only first row Show all	>Lus10014331 pacid=23164653 polypeptide=Lus10014331 locus=Lus10014331.g ID=Lus10014331.BGIv1.0 annot-version=v1.0 ATGGACCCTTCAACTTCAGAACTGATCCCTGCTGAACAAGAAGAATTACAATTAGAAGAGGATGACAGTACCATCTATGACGAGTTAAAGAAACGAATGT GGAAGGATCGCTTACGCCTCCAAGAGCTACAAGAAAAACGAGGCAAGATGATGATGAACAACAATGGCAGCAAACCCAACAACAAGGAAGAAGCACAAGG AGAAACGACGTCGTCTTCTTCCTCCCCCGTAAAACAGGAAGCGTCCAGGCGGAAGAAGATGGCTCGAGCTCAGGACTCCATCCTCAAGTACATGGTCAAG ATCATGGAAGTCTGCAATGGCAGAGGTTTCGTCTACGGTATCATTCCAGAAAAGGGGAAGCCCGTTAGCGGCTCCTCCGACAGTCTCCGCCACTGGTGGA AAGACTCCGTCCGGTTCGATCAGACCGCCACTCAAGCCCTAATCCAATTCCACACCTCCTCCCCTGCATCCGCCGTCCTCGATCATCCTGCCCCGAACAG ACTCCACGAGCTGCAGGACACGACTTTGGGGTCCCTGATTTCGGCGCTGATGCAGCACTGCGTCCCTCCCCAGCGGCGGTTCCCGCTGGAGAGGGGATTG CCTCCGCCGTGGTGGCCCACTGGGAACGAGATCTGGTGGGAAGGACAGGGGTCGGCGACGACGGATCACGGCCCGCCGCCGTACCGGAAGCCGCACGATC TGAAGAAGGCTTGGAAGCTGAGCTTGCTGACGGCGGTGATGAAACATATGGCGCCCGATTTCCACCGGATGCGTCGGCTGGTGAGGCATTCGAAGTGCTT GCAAGACAAGATGACCGCCAAGGAGACCGCGATTTGGTCCACCGTCGTTAGCCAGGAGGAGGAGGAAGCCTTAATCGGCCGTCAACTCACTAAAAGCGTT AGGATCTCCGAATTAGCATCCACCCCCTCCGCAGAGAAAAGGAAGAAGAGCAGTTCCGATACGGAGGCAGAGCAAGCGGATTTGATGTATTCTTGCCGGA ATCAATCGTGCCCGCAGAGCAAGCCGGGGCTAGGGTTTATCGACAAGAATGCGAGATCTGATCATCAATTAGATTGCGCGTACCCGGAAAAGGTTATTGT GCAAGACATTTTGGAGATCGATTCGGAAAGCAGCGACATCGATGAGGGTGAAGATGGCGGCGGTCCGAAGCAGGTGATAGTTCCGGCGGGGAGTGAGCTG AGTGTGACGGATTGGGCTAATATGGTGCTGGAAAGCGCTAATGTATTAGAGAAGGGGGAAAGTTCAGACGGAATGGAAGGATTAGGATTGGAGGAAACAA CGGGGTTTGATGAGATGCATCATAGGGGAGATATTGAATTTGATTTGAATCTTTATCCATCGTCGGATGACCATGGTGGTAGTGGAGTTGATGCTGCTGC TGCTGCTGCTGCTGCAGCTTCAATCTGGGATTTGGGATATGTTGAACCGACTAGCCCCAGCTAA
AA sequence Show only first row Show all	>Lus10014331 pacid=23164653 polypeptide=Lus10014331 locus=Lus10014331.g ID=Lus10014331.BGIv1.0 annot-version=v1.0 MDPSTSELIPAEQEELQLEEDDSTIYDELKKRMWKDRLRLQELQEKRGKMMMNNNGSKPNNKEEAQGETTSSSSSPVKQEASRRKKMARAQDSILKYMVK IMEVCNGRGFVYGIIPEKGKPVSGSSDSLRHWWKDSVRFDQTATQALIQFHTSSPASAVLDHPAPNRLHELQDTTLGSLISALMQHCVPPQRRFPLERGL PPPWWPTGNEIWWEGQGSATTDHGPPPYRKPHDLKKAWKLSLLTAVMKHMAPDFHRMRRLVRHSKCLQDKMTAKETAIWSTVVSQEEEEALIGRQLTKSV RISELASTPSAEKRKKSSSDTEAEQADLMYSCRNQSCPQSKPGLGFIDKNARSDHQLDCAYPEKVIVQDILEIDSESSDIDEGEDGGGPKQVIVPAGSEL SVTDWANMVLESANVLEKGESSDGMEGLGLEETTGFDEMHHRGDIEFDLNLYPSSDDHGGSGVDAAAAAAAAASIWDLGYVEPTSPS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G65100	EIL		Ethylene insensitive 3 family ...		Lus10014331 [exp]	0	1
AT5G09630			LisH/CRA/RING-U-box domains-co...		Lus10007106 [exp]	8.7	0.8220
					Lus10043270 [exp]	9.8	0.8246
AT5G50090			unknown protein		Lus10004229 [exp]	12.5	0.8294
AT4G25600			Oxoglutarate/iron-dependent ox...		Lus10014973 [exp]	12.9	0.8318
AT2G23290	MYB	ATMYB70	myb domain protein 70 (.1)		Lus10021762 [exp]	15.0	0.8070
AT1G68690		AtPERK9	proline-rich extensin-like rec...		Lus10017898 [exp]	26.4	0.8004
AT1G64970		VTE4, TMT1, G-T...	VITAMIN E DEFICIENT 4, gamma-t...		Lus10009537 [exp]	32.5	0.8023
AT2G43900			Endonuclease/exonuclease/phosp...		Lus10027073 [exp]	36.6	0.7818
AT1G18440			Peptidyl-tRNA hydrolase family...		Lus10032480 [exp]	43.8	0.7810
AT2G34500		CYP710A1	cytochrome P450, family 710, s...		Lus10028129 [exp]	44.1	0.7921

Compare expression of checked genes

Lus10014331 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.