Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G65030 135 / 7e-40 unknown protein AT5G10210 116 / 2e-32 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026048 [exp] 367 / 1e-130 AT5G65030 129 / 3e-37 unknown protein Lus10026049 [exp] 353 / 2e-125 AT5G65030 129 / 3e-37 unknown protein Lus10041692 [exp] 251 / 4e-85 AT5G65030 118 / 4e-33 unknown protein Lus10024055 [exp] 249 / 3e-84 AT5G65030 124 / 2e-35 unknown protein Lus10041694 [exp] 244 / 5e-82 AT5G65030 122 / 2e-34 unknown protein Lus10041693 [exp] 244 / 5e-82 AT5G65030 122 / 2e-34 unknown protein Lus10014340 [exp] 154 / 4e-48 AT5G65030 62 / 2e-12 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G092300 [exp] 195 / 3e-63 AT5G65030 155 / 8e-48 unknown protein Potri.005G076100 [exp] 192 / 3e-62 AT5G65030 154 / 1e-47 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10014339 pacid=23164666 polypeptide=Lus10014339 locus=Lus10014339.g ID=Lus10014339.BGIv1.0 annot-version=v1.0 ATGGGTCCACCTTCTTCAAACCATGATCATCTCTCCTGCGAAATATCGGTCCACCAATCCAAGAACGTCGAGGAGTTCATGATCATGAACAAGTATTACA ACAAGCCCCATGGCAGCTTGTTTGTGAGATACTATCTTTCAGCAGGAAACAACACCAACCACAAAATCCAACTCCAGACTAGAGAAGTTCCATCAAGGTT GTCTACCAGTGATGATCATCTTTCTTGGAACGAGTCCTTCTCGTTGGATTGCTTAGGCAACCAAGACTCGTTCAACGCCCTCAAGAAGAGTAGTGTGGTC TTTGAGTTGAGATGGAGATCCTCAGTGCGAACCAACATCCTTGCAGGTTCTAAGCTTGTGGGTAGAGCTGAGCTTCCGTGGGGAAGTGTCATGGAGTCAC CTAGCATGGAGATTGAGAAATGGGTTGTTATGAACCCGAAGAATAGCAAAAGATGTGATGGTGTTAAGCCTCCTTCGGTGAAGATCGGGATGAGGGTTCG AGTTCCAAAATCGATAGAGATCGAGATGAAAAAGAAGAATCATAAAAGTGATGAGAAGAGTTATGAGTGCGGGTGTAGTTGTAGACATAGTAGCTATCAT TCTTGTGCTGATTATGATGTTCTTGCGCTTGTAGCAGCTTTTGAAGCAGTATAA
AA sequence Show only first row Show all	>Lus10014339 pacid=23164666 polypeptide=Lus10014339 locus=Lus10014339.g ID=Lus10014339.BGIv1.0 annot-version=v1.0 MGPPSSNHDHLSCEISVHQSKNVEEFMIMNKYYNKPHGSLFVRYYLSAGNNTNHKIQLQTREVPSRLSTSDDHLSWNESFSLDCLGNQDSFNALKKSSVV FELRWRSSVRTNILAGSKLVGRAELPWGSVMESPSMEIEKWVVMNPKNSKRCDGVKPPSVKIGMRVRVPKSIEIEMKKKNHKSDEKSYECGCSCRHSSYH SCADYDVLALVAAFEAV

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G65030			unknown protein		Lus10014339 [exp]	0	1
AT4G27290			S-locus lectin protein kinase ...		Lus10037729 [exp]	3.7	0.9300
AT4G21380		ARK3	receptor kinase 3 (.1)		Lus10033365 [exp]	6.9	0.9419
AT4G27290			S-locus lectin protein kinase ...		Lus10016871 [exp]	9.9	0.9385
AT2G20030			RING/U-box superfamily protein...		Lus10012975 [exp]	11.2	0.9238
AT5G58630			unknown protein		Lus10040661 [exp]	11.7	0.9281
AT5G43540	C2H2ZnF		C2H2 and C2HC zinc fingers sup...		Lus10014755 [exp]	12.3	0.9385
AT2G37050			Leucine-rich repeat protein ki...		Lus10004275 [exp]	12.3	0.9390
AT3G21530			DNAse I-like superfamily prote...		Lus10012772 [exp]	14.4	0.9342
					Lus10033269 [exp]	16.4	0.9363
AT2G29420		GST25, ATGSTU7	GLUTATHIONE S-TRANSFERASE 25, ...		Lus10040764 [exp]	17.2	0.9352

Compare expression of checked genes

Lus10014339 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.