Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36650 60 / 4e-10 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023883 [exp] 335 / 7e-115 AT2G36650 103 / 1e-24 unknown protein Lus10025846 [exp] 42 / 0.0007 AT1G52080 337 / 4e-108 actin binding protein family (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G098400 [exp] 96 / 3e-22 AT2G36650 142 / 4e-38 unknown protein Potri.001G191300 [exp] 45 / 3e-05 AT1G52080 349 / 3e-112 actin binding protein family (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10014389 pacid=23143748 polypeptide=Lus10014389 locus=Lus10014389.g ID=Lus10014389.BGIv1.0 annot-version=v1.0 ATGGAGGTGGAATCGGCGTTGGCGATCGAGAGGGCGCGGGCTGGATTCCTGGAGAGGGAGATATCGTCGCTGGAAATGGGGAAGCGGAGGTTTGAGGCGT TGGTGAGGGAGTACGAGAGAACTGTGCAGACGCTGGAAGTGGCGGGTTTGAGGAATGAGCTGCTTGAAGGGAAGGTGCGGAGGATAGTGAGGAAAGTCAG AGGGCAGGAGAGGTTGATTATGGAGAAAGGTGAGAGGGTTGGGGAATTGGAAGGTGAGGTTTTGAATTGTTTGGAGGAATTGGAGAGAAGGAGTGTTTTG ATTGATCGATTGGAGGCGGATGTTGAGAGATTGACGGCGGAGAAGGTTGATTTGGCGGTGAAGCTCAGTTCAGAGGAGGAGGCTGAAACTGAAAAGCAGA ACAATGAAGAGTTGGTGCCTGTTGAAGACTACAACCGCATAGCAAAAGAGCTAGACCAAGCACGAACGGACCAGATAGCAGAAACCACAGAACTAACTTA CTTAAGATGGACCAACGCATGCCTTAAGCACGAACTCATGAGAAGCTATCAACTTCAGCAACAACTCCGGTCAGAGCTGGCCGATGACGAATCTCATCAC CATCGCGACAAAGAAGAAGATTGTCACCACGAATCTTCTTCGTCCCCTGATCATCACCATCATTCCAGGAGGAAGAAGTTGATTCACAAGCTTAAGAAAT GGGTTGAAGGAAATGATGAGAGTAACAAGAGCCATTTCCACTCCAAGAACAACCAGCAGGGCAACAACAAGTGCATTGGATGGATGCCTGTTTTCGACGA AGGAGATGAAGAGGATCGAGATAACGGAGATGTAGCTGCGCGTGGAAGATCTTGTTCTAGTTTCTGA
AA sequence Show only first row Show all	>Lus10014389 pacid=23143748 polypeptide=Lus10014389 locus=Lus10014389.g ID=Lus10014389.BGIv1.0 annot-version=v1.0 MEVESALAIERARAGFLEREISSLEMGKRRFEALVREYERTVQTLEVAGLRNELLEGKVRRIVRKVRGQERLIMEKGERVGELEGEVLNCLEELERRSVL IDRLEADVERLTAEKVDLAVKLSSEEEAETEKQNNEELVPVEDYNRIAKELDQARTDQIAETTELTYLRWTNACLKHELMRSYQLQQQLRSELADDESHH HRDKEEDCHHESSSSPDHHHHSRRKKLIHKLKKWVEGNDESNKSHFHSKNNQQGNNKCIGWMPVFDEGDEEDRDNGDVAARGRSCSSF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36650			unknown protein		Lus10014389 [exp]	0	1
AT2G36650			unknown protein		Lus10023883 [exp]	1.7	0.9652
					Lus10038232 [exp]	1.7	0.9687
					Lus10032860 [exp]	3.2	0.9674
					Lus10010378 [exp]	3.9	0.9617
					Lus10025868 [exp]	4.0	0.9635
AT5G63710			Leucine-rich repeat protein ki...		Lus10035959 [exp]	4.6	0.9538
AT5G63710			Leucine-rich repeat protein ki...		Lus10025703 [exp]	4.9	0.9467
AT1G69880		ATH8	thioredoxin H-type 8 (.1)		Lus10037225 [exp]	5.5	0.9593
AT4G05430			Carbohydrate-binding X8 domain...		Lus10038529 [exp]	5.5	0.9442
AT1G07400			HSP20-like chaperones superfam...		Lus10021503 [exp]	6.0	0.9366

Compare expression of checked genes

Lus10014389 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.