Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36780 432 / 8e-148 UDP-Glycosyltransferase superfamily protein (.1) AT3G53150 429 / 2e-146 UGT73D1 UDP-glucosyl transferase 73D1 (.1) AT2G36750 427 / 8e-146 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36800 427 / 8e-146 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36770 426 / 2e-145 UDP-Glycosyltransferase superfamily protein (.1) AT2G36760 425 / 6e-145 UGT73C2 UDP-glucosyl transferase 73C2 (.1) AT2G36790 411 / 1e-139 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT3G53160 404 / 7e-137 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT2G15490 331 / 2e-108 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT2G15480 328 / 2e-107 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027739 [exp] 417 / 5e-142 AT2G36780 453 / 2e-156 UDP-Glycosyltransferase superfamily protein (.1) Lus10023893 [exp] 412 / 4e-140 AT2G36780 495 / 1e-172 UDP-Glycosyltransferase superfamily protein (.1) Lus10014403 [exp] 409 / 9e-139 AT2G36780 506 / 6e-177 UDP-Glycosyltransferase superfamily protein (.1) Lus10016268 [exp] 400 / 2e-135 AT2G36780 498 / 1e-173 UDP-Glycosyltransferase superfamily protein (.1) Lus10003323 [exp] 399 / 9e-135 AT2G36800 493 / 2e-171 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Lus10014401 [exp] 399 / 4e-134 AT3G53150 537 / 0.0 UDP-glucosyl transferase 73D1 (.1) Lus10014437 [exp] 397 / 1e-133 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10012011 [exp] 389 / 6e-131 AT2G36780 488 / 8e-170 UDP-Glycosyltransferase superfamily protein (.1) Lus10003322 [exp] 370 / 2e-123 AT2G36780 468 / 9e-162 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G120600 [exp] 454 / 2e-156 AT3G53150 617 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.016G097400 [exp] 451 / 2e-154 AT3G53150 626 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.012G048700 [exp] 430 / 5e-147 AT2G36800 550 / 0.0 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Potri.009G098966 [exp] 371 / 5e-124 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098400 [exp] 367 / 1e-122 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303300 [exp] 367 / 2e-122 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303700 [exp] 365 / 8e-122 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G302400 [exp] 365 / 2e-121 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G099032 [exp] 364 / 2e-121 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302300 [exp] 357 / 1e-118 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10014402 pacid=23143701 polypeptide=Lus10014402 locus=Lus10014402.g ID=Lus10014402.BGIv1.0 annot-version=v1.0 ATGGCTCCCAATAACAATCACCACCACCCACCACACTTCGTCTTAATCCCATACTTAAGCCAAGGCCAGCTCATCCCCACCATCGACCTCGCCAAAATCC TCGCCCTCCGCCACTCCACCGTCACCATCATCACCACCCCGATCAACGCCGCCCGCTTCTCCCCCACCCTCCACCGTGCCGTCTCCAAGTCGGGCCTCGA CATCCGGGTCCTCACCCTCCCCTTCCCCGCCGCCCGCTTCGGACTCCCAGACGGCTGCGAGAACCGCGACGTCCTCCCTTCCTTCAACCTCTTCAAAAAC TTCTCCGACGCCGTCAGAACCCTGGAGCAACCCGCTTCCGATCTGATCAGCGGGCTCGACCCGTCTCCTTCCTGCATCATCGCTTCCCAGGCTATGCACT GGACGACTGAGATCGCCTCCCGGTTGAAGATCCCGCGGCTGATATTCGACGGCACCAGCTGCTTCACCTTATCCTGTTCGCACAATTTGCAAGTCTCGAA AGTGTACGAAGAGGTCTCAGAGTCGGAGCCGTTCGTTGTGCCCGGGTTGCCCCACCGGGTTGAGTTCACCCGGGCCCAACTATCCGGCCTGTTCAATCCG GGAGCCCATCTCGACGTGAGCGAGATCCGCGAGAAAATATCCGAGTCCGTTGACAAAGCCTACGGCGTCGTATTCAACAGCTTCGAAGAGCTGGAGCCCG AGTACGTAACGGAATGCCGCAAAATCCGAGGAGAGAGAAAGATCTGGTGCGTGGGGCCCGCTTCGTTATGCAATACGGACGATCCGGACAAGGCGGAGAG GGGGAACAAACCTTCCTCCGACGAGAGAAATTGCCTCCGGTGGTTAGATTCCTGGCCGGAAAAATCAGTGATCTACGCCTGCTTAGGAAGCTTGAACCGG ATCACTCCATCGCAATCGGCTGAGCTGGCGTTAGGACTGGAATCGACGAACAGGCCGTTCGTGTGGGTGATTCGAGGCGGGTACAAGAAGGAAGAGATCG AGATCTGGATTTCGGAGTCAGGATTCGAATCCAGAGTGAAGAACAGAGGGCTGCTCATTCGCGGATGGGCGCCGCAGGTGTTGATACTGTCTCACCGGTC GATCGGAGGGTTCCTGACGCACTGCGGGTGGAATTCGACTTTGGAAGGGGTGGCGGCGGGGGTTCCGATGGCGACGTGGCCGCAGTTTGCGGAGCAATTC TACAACGAGAAGCTGGTAGTAGAGGTTCTGGGGATTGGAGTGAGGGTTGGGGCGGAGGTGGTGGTGCATTTGGGGGAGGAGGAGAAGCACGGGGTACAAG TGAGGAAGGAGAGGATTATGGAGGCGGTGGAGGAGCTTATGGGCGGCGGAGATGAGAGCGAAGGAAGGAGGACGAAGGCGGAGAAGCTGAAGGGAATGGC TACGGCGGCTGTTGCGGATGGTGGTTCTTCGTCTAAGAGTGTGGGGATGTTGATTGAGGATGTGGCCAATTTTGGCGGGGAATTTGGTGTTTAA
AA sequence Show only first row Show all	>Lus10014402 pacid=23143701 polypeptide=Lus10014402 locus=Lus10014402.g ID=Lus10014402.BGIv1.0 annot-version=v1.0 MAPNNNHHHPPHFVLIPYLSQGQLIPTIDLAKILALRHSTVTIITTPINAARFSPTLHRAVSKSGLDIRVLTLPFPAARFGLPDGCENRDVLPSFNLFKN FSDAVRTLEQPASDLISGLDPSPSCIIASQAMHWTTEIASRLKIPRLIFDGTSCFTLSCSHNLQVSKVYEEVSESEPFVVPGLPHRVEFTRAQLSGLFNP GAHLDVSEIREKISESVDKAYGVVFNSFEELEPEYVTECRKIRGERKIWCVGPASLCNTDDPDKAERGNKPSSDERNCLRWLDSWPEKSVIYACLGSLNR ITPSQSAELALGLESTNRPFVWVIRGGYKKEEIEIWISESGFESRVKNRGLLIRGWAPQVLILSHRSIGGFLTHCGWNSTLEGVAAGVPMATWPQFAEQF YNEKLVVEVLGIGVRVGAEVVVHLGEEEKHGVQVRKERIMEAVEELMGGGDESEGRRTKAEKLKGMATAAVADGGSSSKSVGMLIEDVANFGGEFGV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36780			UDP-Glycosyltransferase superf...		Lus10014402 [exp]	0	1
AT4G25810		XTH23, XTR6	xyloglucan endotransglucosylas...		Lus10030484 [exp]	1.7	0.8915
AT1G27040			Major facilitator superfamily ...		Lus10002793 [exp]	4.5	0.8868
AT4G21200		ATGA2OX8	ARABIDOPSIS THALIANA GIBBERELL...		Lus10030567 [exp]	4.8	0.8026
AT3G23150		ETR2	ethylene response 2, Signal tr...		Lus10021880 [exp]	4.9	0.8730
					Lus10040690 [exp]	5.2	0.8742
AT2G38870			Serine protease inhibitor, pot...		Lus10014740 [exp]	5.5	0.8730
AT3G23150		ETR2	ethylene response 2, Signal tr...		Lus10041159 [exp]	7.9	0.8713
AT3G21360			2-oxoglutarate (2OG) and Fe(II...		Lus10038282 [exp]	9.5	0.8641
AT1G75540	CO	LHUS, AtBBX21, ...	long hypocotyl under shade, B-...		Lus10028791 [exp]	10.4	0.8721
AT4G19460			UDP-Glycosyltransferase superf...		Lus10033297 [exp]	10.4	0.8458

Compare expression of checked genes

Lus10014402 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.