Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36810 2298 / 0 ARM repeat superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023895 [exp] 2878 / 0 AT2G36810 2390 / 0.0 ARM repeat superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G120800 [exp] 2519 / 0 AT2G36810 2559 / 0.0 ARM repeat superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10014405 pacid=23143702 polypeptide=Lus10014405 locus=Lus10014405.g ID=Lus10014405.BGIv1.0 annot-version=v1.0 ATGGCGTCTTCGAGCTCCGGAAGCTCAATTCCCGCGCCAGAGGCAGTTCAGGTTCTGGTCTCCTCGCTCGCTGATGAATCGCCGATGGTCAGAAAAGCTG CCATGGCTTCTCTCAAGGATATTGCCATTCTGAATCCGCTTCTCGTTCTTGATTGTTGCTCTGCGGTGTCTCGTGGTGGACGAAGACGATGTGGGAACAT TGCTGGACTGTTTCAAGTAATGGCAATGGGAGTTGGAGCGTTGGAGAAAGACGATGTTGATCCTTCTTTCATGGCCAAGCTTGCGAAGATTGCTACTGCA GAGATTATCTCTTCTAAGGAAGTAAACACAGATTGGCAGAGGGCTGCGGCTAGCTTACTTGTTGCTATAGGATCCCATCTACCTGATCTGATGATGGAGG AGATTTTTCTTCATTTGTCTGGACCTAGTTCAGCTCTGCCTGCTATGGTGCAAATACTTGCAGATTTTGCTACCGCTGATGCCTTGCAGTTCATTCCAAG ATTAAAAGCTGTCCTTTCTCGAATTTTACCTCTTCTTGGAAATGTACGAGATGTCCATCGGTCAATCTTTGCAAATGCATTTAAATGCTGGTGCCAGGCT GCTTGGCTGTATCGTGCTGATTTCCCATCAAATTCCTTTCTTGACAGTGATGTCATGTCGTTCCTAAATTCTGGCTTTGAGCTTCTATTGAGAGTTTGGG CAACTTCACGTGATCTTAAGGTCCGCGCATCTTCGGTGGAAGCATTGGGTCAATTGGTTGGCCTTATAACTCGTACACAACTGAAGGCAGCTTTGCCCAG ACTTGTCCCCACCATGTTAGAATTGTGCAAAAAGGATCAGGATATTGCCCTTCTGGCTACGATTTCTCTTCACAATCTTCTGGATGCAGCTTTATTATCA GAGACTGGTCCGCCAATGCTTGATTTTGAGGACCTCATGGTAATTCTATCAACTCTTCTCCCAGCAGTTTGCGTCTACGATGACAGAAAAGGGCATTCAG ATTTTTCATTGGGACTTAAGACTTATAATGAAGTTCAGCACTGCTTTATGATCATCGGTATGGTGTATCCTGATGATCTGTTTACATTCCTTTTAAATAA ATGCCGGTTGAAGGAAGAATCTTCGACTTTTGGGGCAATATGTGTATTAAAGCACCTTCTCCCCAGGTCATCTGAAGCTTGGCATAGTAAAAGGCCGTTA CTTGTTGAAGTTGTCAAGTCTTTGCTAGATGAGCAAAACTTGTGTGTCCGAAAGGCTCTGTCTGAGTTGATCGTGGTCATGGCCTCTCATTGCTATTTTG TTGGGCCTTCTGGAGAAATATTTGTTGAATACTTGGTGCGCCACTGTGCTCTATCAGACAATGAAAGACATGATCCCGGGAAATCTATGATGAAGATAGG ATTTTTTAGCGTAGGAGAATTGAGGGCAGTATGTGAGAAAGGTCTTCTTCTGTTAACAATTACAATTCCTGAGATGGAGCATATTCTTTGGCCTTTTCTG TTGAAGATGATTGTTCCACGAATTTATACTGGTGCAGTAGCTACGGTCTGCCGATGCATCTCAGAATTGTGTAGACAGAAATCTTCTAACAGTAACAACA TACTGGGTGAATGCAAAACTCGGTCTGATATACCTATCCCTGAGGAGCTTTTGGCTCGTCTGTTGGTGCTTTTGCACAATCCCCTTGCTCCGTCACAGTC AGCAACTCAGATTTTGAATGTCCTTTGCTTTTTGGCTTCCCTCTTCCCAAGAAATATTACCTTGTTTTGGCAGGATGAGATTCCCAAAATGAAGGCCTAT GTTAGTGACACAGACGATTTAAAGCTGGATCCTTCATACCAAGAGACATGGGATGACATGATAATCAATTTTCTTGCAGAATCCTTAGATGTAATTGAAG ATAACGACTGGGTGATATCTCTTGGAAATGCTTTTACAAACCAATATGAGCTGTATGCACCAGAGGATGAACATTCTGGCCTGCTTCATCGGTGCCTCGG CATGCTTTTGCAAAAAGTTGATGATAAGGGATATGTCCAGGACAAGATCAATTGGATGTACAAACAAGCTGACATTGCTATTCCAACCAACAGACTTGGT TTAGCAAAAGCCATGGGATTGGTTGCTGCATCTCACTTGGACACTGTTCTGGAAAAGCTGAAAGACATTCTGGTAAATGTTGGCCAAACCATTTTCCAGA GATTATTGTCGTTATTCTCGGAGAATTATAAAACAGAGGATTCAGATGACATACATGCCGCGTTGGCTCTGATGTATGGGTATGCTGCAAGATATGCTCC ATCCACAGTTATTGAAGCCAGGATAGATGCACTTGTTGGGACCAATATGCTCTCAGAGCTTCTCCATGTGCGCCATCCTACTGCAAAGCAGGCTGTAATT ACTGCTATTGACTTGCTAGGTTGTGCTGTTATCAATGCTTCTGAAAGCGGAGCACCATTCCCACTGAAAAAAAGAGATGTCCTGCTCGACTATATATTAA CCCTAATGGGAAGAGATTATGAAGAAGATTTTGCTGATTCCAGTCTTGAACTTCTCCGAACTCAGGCATCGGCTTTAAGCGCTTGTACCACTTTGGTTTC GGTGGAGCCGAAACTGACAATAGAAACAAGAAACCTGGTTTTGAAGGCAACCTTAGGATTTTTTGCTGTACCCAATGAGCCAGAAGATGTTGTCAAATCC CTTATAGACAACCTAATCACTCTGTTATGTGCAATCCTCCTTACAAGTGGAGAGGATGGAAGAAGTCGGTCAGAGCAGCTATTGCATATTTTGAGACATA TTTATCATTATGTTACTTCAGCGGGTGATTATCAGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAACTTACCATCTGCTTTCGTAAT GCCAAGCCGTGAAGCCCTTTCTTTGGGGGAGAGGGTCATTGTTTATCTACCTCGTTGTGCAGACACTAGTTCTGAAGTTCGAAAAGTTTCTGCTCAGATT CTGGATCAACTCTTCAGCATTGCTCTCTCTCTTCCAAAACCGCTTGGATCTATCACTAGTGTGGATATGGAATTATCTTATCAGTCCTTATACTCACTTG AGGATGTTATAGCCATTTTGAGAAGGGATGCTTCCATTGACCCATCAGAGGTTTTCAACCGAATCGTTTCGTCTGTTGGTGTTTTATTGACAAAGGATGA GCTTGTTGGAAGCTTGTATGGTTCTGCAGCAGGTATATGCGACAAGATCAAGCCATCAGCTGAAGGAACTATACAAGCTGTTATCGAGTTTGTTACTAAG AGGGGAAATGAACTAAACAATGCTGATCTTTCAAGAACAACGCAGTCGCTGCTCTCTGCTGCAATACATGTAACTGAGAAACATCTAAGATTGGAGACTA TTGGAGCTATTTCTTCACTTGCTGAAAGTACCAGTTCGAAAATCGTCTTCAATGACGTACTGGCAACTGCTGGAAAAGATATCATTACCAAGGACATATC TAGATTACGAGGTGGCTGGCCAATGCAGGATGCCTTTTATGCCTTCTCTCAGCACCCTGCTCTGTCATCTGAATTTCTGGAGCATCTGATATATGTTCTT AATCAGACCCCTGTTGGTAAAGGGGATATGGATAAAGGAGAAAGCTTAAATAGTTCTACAGATGTCCAGATGGAGGATGAAATTCTTCAGGCTTCTATGT TCGCTCTGACTGCCTTTTTTAGAGGTGGAGGTAAAGTCGGAAAGAAGGCTGTCGAGCAAAGTTATGCTTCCGTTCTCGCTGGACTTACACTCCAATTTGG AAGTTGTCATGGTCTTGCTAGTTTTGGCCAGCGTGAGCCATTACAATATCTTCTAGCAGCATTTCATGCCTTTTGTGAATGTGTCGGAGACCTTGAGATG GGAAAGATACTTGCCAGAGACGGAGAACTAAATGAAAATGAGAAGTGGATCGCTGTAATTCGAGATATAGCTGGCTGCATTTCCATTAAGAGACCAAAAG AGGTTCAAACTATTTGCTTAAGTCTAACAAAATCGTTGAATCGGCAACAAAGATTTCAAAGAGAAGCTGCAGCTGCTGCATTGTCAGAGTTTGTTCGATA CAGTGGAGAATTTGGGACTGTTTTGGAGGAAATAGTCGAGGCATTGTGTCGACATGTGTCAGATGAGTCTCCAACTGTTAGACGCCTTTGTTTAAGAGGC CTTGTCCAGATACCACCTGTTCATATCTCTCAGTACACAACTCAAATATTGGGTGTAATAGTGATCTCCCAGTCCACATCTCAAATATTGGGTGTAATAG TGGCATTGATGGATGATGCTGATGAATCTGTTCAATCAACTGCTGTTTCTTGTTTGCTCACGATTCTTGACTCCTCGCCCAACAATGCAGTGGAGCCTAT TTTACTTAATCTTTCTGTCAGACTGCGGAATCTCCAACTGGAAGTAATATTCTCTATGGCTCTCAGCACTTTGTGTGTCGGAGAGCAGCGTGATGCATTT ATTGAGCAGATACACGCTGCCTTTCCCCGCTTGATTCTGCACCTTCATGACGATGATCTTAGTGTCCGACAGGCCTGCCGAAACACCCTCAAGCGAATCG TTCCATTGGTGGAGATGGAAGGATCAGTTACCTTATTCAACTCCAACTTCTTCACCTCCAACCACAGGCATGAATCACTACAACTTTCAGCACTTGAACT TACGAACACGAAACTATCGCGTTTAGTCGACACCTACATAGCACTCGCCATTCAGGCTTTTGATTCGACGTGGCCTGTGATCCAAGCGAACGCTATTTAC TTAGTCAGCAGCTTCCTATCGGTTTCAGATGATCAGCGGACATTAGCACTTTACTACTCGCAGGTGTTTGGAATGCTGGTAGGCAAGATGAGCCGATCAC CAGATGCAGTAGTGAGGGCAAGATGCTCCTCGGCACTCGGCCTCTTACTGAAATCATCCAATTCACTATCGTGGAGATCATCCCGGTTCGACAGAAGGCC TAGCGACTGA
AA sequence Show only first row Show all	>Lus10014405 pacid=23143702 polypeptide=Lus10014405 locus=Lus10014405.g ID=Lus10014405.BGIv1.0 annot-version=v1.0 MASSSSGSSIPAPEAVQVLVSSLADESPMVRKAAMASLKDIAILNPLLVLDCCSAVSRGGRRRCGNIAGLFQVMAMGVGALEKDDVDPSFMAKLAKIATA EIISSKEVNTDWQRAAASLLVAIGSHLPDLMMEEIFLHLSGPSSALPAMVQILADFATADALQFIPRLKAVLSRILPLLGNVRDVHRSIFANAFKCWCQA AWLYRADFPSNSFLDSDVMSFLNSGFELLLRVWATSRDLKVRASSVEALGQLVGLITRTQLKAALPRLVPTMLELCKKDQDIALLATISLHNLLDAALLS ETGPPMLDFEDLMVILSTLLPAVCVYDDRKGHSDFSLGLKTYNEVQHCFMIIGMVYPDDLFTFLLNKCRLKEESSTFGAICVLKHLLPRSSEAWHSKRPL LVEVVKSLLDEQNLCVRKALSELIVVMASHCYFVGPSGEIFVEYLVRHCALSDNERHDPGKSMMKIGFFSVGELRAVCEKGLLLLTITIPEMEHILWPFL LKMIVPRIYTGAVATVCRCISELCRQKSSNSNNILGECKTRSDIPIPEELLARLLVLLHNPLAPSQSATQILNVLCFLASLFPRNITLFWQDEIPKMKAY VSDTDDLKLDPSYQETWDDMIINFLAESLDVIEDNDWVISLGNAFTNQYELYAPEDEHSGLLHRCLGMLLQKVDDKGYVQDKINWMYKQADIAIPTNRLG LAKAMGLVAASHLDTVLEKLKDILVNVGQTIFQRLLSLFSENYKTEDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSELLHVRHPTAKQAVI TAIDLLGCAVINASESGAPFPLKKRDVLLDYILTLMGRDYEEDFADSSLELLRTQASALSACTTLVSVEPKLTIETRNLVLKATLGFFAVPNEPEDVVKS LIDNLITLLCAILLTSGEDGRSRSEQLLHILRHIYHYVTSAGDYQRXXXXXXXXXXXXPNLPSAFVMPSREALSLGERVIVYLPRCADTSSEVRKVSAQI LDQLFSIALSLPKPLGSITSVDMELSYQSLYSLEDVIAILRRDASIDPSEVFNRIVSSVGVLLTKDELVGSLYGSAAGICDKIKPSAEGTIQAVIEFVTK RGNELNNADLSRTTQSLLSAAIHVTEKHLRLETIGAISSLAESTSSKIVFNDVLATAGKDIITKDISRLRGGWPMQDAFYAFSQHPALSSEFLEHLIYVL NQTPVGKGDMDKGESLNSSTDVQMEDEILQASMFALTAFFRGGGKVGKKAVEQSYASVLAGLTLQFGSCHGLASFGQREPLQYLLAAFHAFCECVGDLEM GKILARDGELNENEKWIAVIRDIAGCISIKRPKEVQTICLSLTKSLNRQQRFQREAAAAALSEFVRYSGEFGTVLEEIVEALCRHVSDESPTVRRLCLRG LVQIPPVHISQYTTQILGVIVISQSTSQILGVIVALMDDADESVQSTAVSCLLTILDSSPNNAVEPILLNLSVRLRNLQLEVIFSMALSTLCVGEQRDAF IEQIHAAFPRLILHLHDDDLSVRQACRNTLKRIVPLVEMEGSVTLFNSNFFTSNHRHESLQLSALELTNTKLSRLVDTYIALAIQAFDSTWPVIQANAIY LVSSFLSVSDDQRTLALYYSQVFGMLVGKMSRSPDAVVRARCSSALGLLLKSSNSLSWRSSRFDRRPSD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36810			ARM repeat superfamily protein...		Lus10014405 [exp]	0	1
AT2G36810			ARM repeat superfamily protein...		Lus10023895 [exp]	1.0	0.9838
AT1G31440			SH3 domain-containing protein ...		Lus10033292 [exp]	10.5	0.7747
AT2G43020		ATPAO2	polyamine oxidase 2 (.1)		Lus10020726 [exp]	11.4	0.8230
AT1G05200		GLUR3, ATGLR3.4	glutamate receptor 3.4 (.1.2)		Lus10039671 [exp]	12.1	0.8143
AT3G43240	ARID		ARID/BRIGHT DNA-binding domain...		Lus10027658 [exp]	16.7	0.7939
AT5G04930		ALA1	aminophospholipid ATPase 1 (.1...		Lus10028875 [exp]	16.9	0.8102
AT1G61350			ARM repeat superfamily protein...		Lus10002598 [exp]	18.2	0.7917
AT4G24810			Protein kinase superfamily pro...		Lus10032628 [exp]	19.7	0.7588
AT1G27180			disease resistance protein (TI...		Lus10004727 [exp]	19.9	0.8071
AT5G14430			S-adenosyl-L-methionine-depend...		Lus10022291 [exp]	21.5	0.7800

Compare expression of checked genes

Lus10014405 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.