Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36790 169 / 3e-49 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT2G36800 163 / 4e-47 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT3G53160 141 / 6e-39 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT2G36750 140 / 2e-38 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36760 139 / 6e-38 UGT73C2 UDP-glucosyl transferase 73C2 (.1) AT3G53150 128 / 6e-34 UGT73D1 UDP-glucosyl transferase 73D1 (.1) AT2G36780 123 / 3e-32 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 122 / 9e-32 UDP-Glycosyltransferase superfamily protein (.1) AT4G34135 71 / 6e-14 UGT73B2 UDP-glucosyltransferase 73B2 (.1.2) AT2G15480 70 / 2e-13 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023939 [exp] 259 / 5e-84 AT2G36780 485 / 7e-169 UDP-Glycosyltransferase superfamily protein (.1) Lus10014437 [exp] 146 / 1e-40 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10012011 [exp] 137 / 2e-37 AT2G36780 488 / 8e-170 UDP-Glycosyltransferase superfamily protein (.1) Lus10003322 [exp] 136 / 4e-37 AT2G36780 468 / 9e-162 UDP-Glycosyltransferase superfamily protein (.1) Lus10003323 [exp] 133 / 1e-35 AT2G36800 493 / 2e-171 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Lus10016268 [exp] 129 / 2e-34 AT2G36780 498 / 1e-173 UDP-Glycosyltransferase superfamily protein (.1) Lus10023894 [exp] 125 / 6e-33 AT2G36780 516 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10014404 [exp] 119 / 2e-30 AT2G36760 507 / 4e-177 UDP-glucosyl transferase 73C2 (.1) Lus10027739 [exp] 111 / 8e-28 AT2G36780 453 / 2e-156 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G048700 [exp] 147 / 4e-41 AT2G36800 550 / 0.0 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Potri.006G120600 [exp] 132 / 2e-35 AT3G53150 617 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.001G303000 [exp] 101 / 2e-24 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303600 [exp] 100 / 3e-24 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.016G097400 [exp] 98 / 4e-23 AT3G53150 626 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.001G302300 [exp] 94 / 6e-22 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1) Potri.001G303800 [exp] 93 / 1e-21 AT2G15490 294 / 2e-95 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303700 [exp] 93 / 2e-21 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303300 [exp] 93 / 2e-21 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.009G098966 [exp] 92 / 5e-21 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10014438 pacid=23143727 polypeptide=Lus10014438 locus=Lus10014438.g ID=Lus10014438.BGIv1.0 annot-version=v1.0 ATGGATTCACCAGTACTCCACTTCGTCCTCTTCCCTTTCATGGCGCAAGGCCACATGGTCCCCATGATCGACATCGCCAAGCTCCTAGCCCAACGCGGAC TCCAAGTCTCCATCGTCAGCACTCCGGTCAACGCCGCCCGATTCAGCTCCCAAATCCGAAGCAGGGCTCCCCTCCGGCTGCGAATCCTTCGACCTCCTCC CTTCTCACGACCTAGCAATCAACTTCTTCACCGCCGCCGCCATGATGGAGAATCAAGCCGAAACCCTCCTCGTCGATCTCTCCCGCCACCGAGCTGTATC GTTTCGGATATCAGCCAGCCGTACACTTCCAACCTAGCTGCCAAGTTCGGAATCCCTAGAATCAGCTTCCATGGATTCAGCTGTATGTGCCTGCTGTGCG TTCGGCTGATCGGCCTCCACTCCGACGAGATTCGACAAGACGTACCTTCTGATTCGGACTACTTCGTACTGCCGAAATTTCCCGACGATCGGATCAGGTT CACGAAGCTTCAATTGCCGATGTCGGTGACCGAGGAGACCAAAGGAATTGGAGCTCAGATGCTGAAAGTCGAATCGGAAGCTTACGGAGTGATTATGAAC AGCTTCCGTGATTTGGAAGAGAAGTACATCGCCGAGCTGAAGAAAGGACATGGAAGGATCTGGTGCGTTGGTCCAGTTTCGTTAACCAATAGTGACGAAT TGGACAAATTACGGAGAGGTGGTGGAGGAGGGGATGATCGCGAACTCGTCGATTGGCTCGATTCGAAGGATTAA
AA sequence Show only first row Show all	>Lus10014438 pacid=23143727 polypeptide=Lus10014438 locus=Lus10014438.g ID=Lus10014438.BGIv1.0 annot-version=v1.0 MDSPVLHFVLFPFMAQGHMVPMIDIAKLLAQRGLQVSIVSTPVNAARFSSQIRSRAPLRLRILRPPPFSRPSNQLLHRRRHDGESSRNPPRRSLPPPSCI VSDISQPYTSNLAAKFGIPRISFHGFSCMCLLCVRLIGLHSDEIRQDVPSDSDYFVLPKFPDDRIRFTKLQLPMSVTEETKGIGAQMLKVESEAYGVIMN SFRDLEEKYIAELKKGHGRIWCVGPVSLTNSDELDKLRRGGGGGDDRELVDWLDSKD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36780			UDP-Glycosyltransferase superf...		Lus10014438 [exp]	0	1
AT1G05820		ATSPPL5	ARABIDOPSIS THALIANA SIGNAL PE...		Lus10001154 [exp]	1.0	0.8359
AT3G06240			F-box family protein (.1)		Lus10026587 [exp]	1.4	0.8261
AT3G14180	Trihelix	ASIL2	Arabidopsis 6B-interacting pr...		Lus10025404 [exp]	2.4	0.7852
AT1G58330		ZW2	transcription factor-related (...		Lus10025265 [exp]	4.9	0.7711
AT5G60200	DOF	TMO6, AtDof5,3	TARGET OF MONOPTEROS 6 (.1)		Lus10014002 [exp]	7.3	0.7133
AT4G12560		CPR1, CPR30	CONSTITUTIVE EXPRESSER OF PR G...		Lus10039024 [exp]	7.6	0.7011
AT3G12660		FLA14	FASCICLIN-like arabinogalactan...		Lus10041630 [exp]	8.5	0.7405
AT2G46660		CYP78A6	"cytochrome P450, family 78, s...		Lus10005995 [exp]	14.7	0.7547
AT3G27030			unknown protein		Lus10041550 [exp]	16.2	0.7517
AT1G28440		HSL1	HAESA-like 1 (.1)		Lus10018636 [exp]	17.3	0.7162

Compare expression of checked genes

Lus10014438 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.