Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G40420 118 / 1e-33 OLE2, PA23, OLEO2 oleosin 2 (.1) AT3G01570 105 / 5e-29 Oleosin family protein (.1) AT3G27660 105 / 7e-29 OLE3, OLEO4 OLEOSIN 3, oleosin 4 (.1) AT2G25890 57 / 2e-10 Oleosin family protein (.1) AT5G51210 54 / 1e-09 OLEO3 oleosin3 (.1) AT4G25140 54 / 3e-09 OLE1, OLEO1 oleosin 1 (.1) AT5G07550 44 / 4e-06 ATGRP19, GRP19 glycine-rich protein 19 (.1.2.3) AT5G61610 45 / 6e-06 Oleosin family protein (.1) AT5G07571 42 / 4e-05 Oleosin family protein (.1) AT5G07540 41 / 0.0001 ATGRP16, ATGRP-6, GRP16 glycine-rich protein 16 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032127 [exp] 242 / 9e-83 AT3G01570 162 / 4e-51 Oleosin family protein (.1) Lus10028035 [exp] 107 / 3e-29 AT3G01570 139 / 8e-42 Oleosin family protein (.1) Lus10003742 [exp] 105 / 5e-29 AT3G01570 142 / 1e-43 Oleosin family protein (.1) Lus10028822 [exp] 71 / 4e-16 AT4G25140 146 / 3e-46 oleosin 1 (.1) Lus10017460 [exp] 72 / 5e-16 AT4G25140 136 / 9e-42 oleosin 1 (.1) Lus10031387 [exp] 68 / 1e-14 AT4G25140 164 / 1e-52 oleosin 1 (.1) Lus10027161 [exp] 65 / 2e-13 AT4G25140 154 / 3e-48 oleosin 1 (.1) Lus10010943 [exp] 67 / 3e-13 AT1G22400 535 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10039683 [exp] 64 / 7e-13 AT4G25140 159 / 2e-50 oleosin 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G345800 [exp] 141 / 3e-43 AT3G01570 140 / 6e-43 Oleosin family protein (.1) Potri.017G071800 [exp] 134 / 1e-40 AT3G01570 130 / 4e-39 Oleosin family protein (.1) Potri.012G083400 [exp] 108 / 2e-30 AT5G40420 97 / 2e-25 oleosin 2 (.1) Potri.015G081901 [exp] 104 / 1e-28 AT5G40420 108 / 5e-30 oleosin 2 (.1) Potri.T125308 [exp] 104 / 1e-28 AT5G40420 108 / 5e-30 oleosin 2 (.1) Potri.006G234900 [exp] 58 / 8e-11 AT2G25890 113 / 1e-32 Oleosin family protein (.1) Potri.003G150600 [exp] 55 / 6e-10 AT4G25140 124 / 3e-37 oleosin 1 (.1) Potri.001G080000 [exp] 55 / 8e-10 AT4G25140 108 / 1e-30 oleosin 1 (.1) Potri.018G057800 [exp] 52 / 7e-09 AT2G25890 91 / 5e-24 Oleosin family protein (.1) Potri.012G059400 [exp] 40 / 0.0003 AT3G18570 113 / 4e-32 Oleosin family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01277 [flax] [poplar] Oleosin Oleosin
Representative CDS sequence Show only first row Show all	>Lus10014559 pacid=23170860 polypeptide=Lus10014559 locus=Lus10014559.g ID=Lus10014559.BGIv1.0 annot-version=v1.0 ATGGCGGATCGTACAACGCAGCCACACCAAGTCCAGGTCCACACCCAGCACCACTACCCTACAGGCGGCGCTTTCGGCCGTTATGAAGGTGTACTCAAAG GCGGTCCATATCACCAGCAAGGGACAGGAAGCGGCCCTTCAGCTTCCAAGGTGCTAGCAGTCATGACCGCGCTCCCCATCGGTGGGACCCTCCTTGCCCT GGCCGGGATTACCTTGGCCGGGACGATGATCGGGCTGGCGATCACCACCCCAATTTTCGTCATCTGCAGCCCGGTTCTCGTCCCGGCCGCTCTGCTCATC GGGTTTGCGGTGAGCGCGTTCTTGGCCTCGGGGATGGCAGGGCTGACAGGGCTGACCTCGCTGTCGTGGTTTGCGAGGTATCTGCAGCAGGCTGGGCAGG GGGTTGGGGTTGGGGTGCCGGACAGTTTCGATCAGGCAAAGAGGCGCATGCAGGATGCTGCTGGGTATATGGGGCAGAAGACTAAGGAAGTTGGGCAGGA GATCCAGAGGAAGTCTCAGGATGTGAAAGCATCTGACAAATAA
AA sequence Show only first row Show all	>Lus10014559 pacid=23170860 polypeptide=Lus10014559 locus=Lus10014559.g ID=Lus10014559.BGIv1.0 annot-version=v1.0 MADRTTQPHQVQVHTQHHYPTGGAFGRYEGVLKGGPYHQQGTGSGPSASKVLAVMTALPIGGTLLALAGITLAGTMIGLAITTPIFVICSPVLVPAALLI GFAVSAFLASGMAGLTGLTSLSWFARYLQQAGQGVGVGVPDSFDQAKRRMQDAAGYMGQKTKEVGQEIQRKSQDVKASDK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G01570			Oleosin family protein (.1)		Lus10014559 [exp]	0	1
AT5G49690			UDP-Glycosyltransferase superf...		Lus10008955 [exp]	3.5	0.8811
AT5G24930	CO	COL4, ATCOL4	CONSTANS-like 4 (.1)		Lus10042431 [exp]	3.7	0.9037
AT3G17020			Adenine nucleotide alpha hydro...		Lus10037761 [exp]	5.2	0.8706
AT4G28570			Long-chain fatty alcohol dehyd...		Lus10022903 [exp]	7.1	0.8570
AT1G22360		ATUGT85A2, AT2	UDP-glucosyl transferase 85A2 ...		Lus10000632 [exp]	12.5	0.8375
AT3G47300		SELT	SELT-like protein precursor (....		Lus10002479 [exp]	13.0	0.8133
AT3G21750		UGT71B1	UDP-glucosyl transferase 71B1 ...		Lus10026795 [exp]	16.9	0.8665
AT5G13770			Pentatricopeptide repeat (PPR-...		Lus10035089 [exp]	18.8	0.8540
AT4G29110			unknown protein		Lus10014153 [exp]	20.8	0.8411
AT3G55760			unknown protein		Lus10021897 [exp]	21.7	0.8483

Compare expression of checked genes

Lus10014559 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.