Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G45980 107 / 4e-28 ATI1 ATG8-interacting protein 1, unknown protein AT4G00355 104 / 9e-27 ATI2 ATG8-interacting protein 2, unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036368 [exp] 374 / 2e-128 AT4G29910 219 / 2e-64 EMBRYO DEFECTIVE 2798, origin recognition complex protein 5 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G086000 [exp] 199 / 5e-63 AT4G00355 200 / 4e-63 ATG8-interacting protein 2, unknown protein Potri.002G160700 [exp] 181 / 7e-56 AT4G00355 217 / 8e-70 ATG8-interacting protein 2, unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10014767 pacid=23150237 polypeptide=Lus10014767 locus=Lus10014767.g ID=Lus10014767.BGIv1.0 annot-version=v1.0 ATGTCTGGACACTTTGTCTTCCCGCCAAGCCAGCATGAGAACTTACCCCTGGAGCCTGATTACAGTGAGATTATGGTTGATGAATCTGCTGGTAAAAAGG TTGACTCTGGATATCATGTTGAAGAAGGGAACATATCTGGTGGAAAAGATGACGGGACTTGGTCATTGAAGGAGCTAAACGTCTCTGAAGATTACCCAGA TGTGCAGTTCTTTGAGTCCGGCAGTAATCAGCTTACTGTCTCTGGTAAAGAGTTCGAAGAAAGTGAGAAATTTCCAGATTTACATCTAATTGACTCGGAA GAAAGTATATACAGTGCAGCTGCGTTTAGTTCTTTGCACAGTGAGACATCAGCACTTGGGGGTTCAACTGTATATGGCGAGACTTTAGGCACTCATGAAT CTGTTGATCAGGGCTCACATCTTCCTGTTGACGACTCTCTTTCTCCAGAACAAGTTACAGAAGGCGGGAAGTCTGAGGGGGCTGAGGCGGCAAGTATGAG GGCCCTGAACTTCCATGTGAAGCTTGGTGGAAAAGAAGGGCTGTATCTCTCTTTTATGGGCCTTGTGATTCTTGGCCAGCGCTGGCAACAAGAAAGGTGG AAAGTTCTGCAGCTTAAGTGGCAGACCACCCTCAACAGCGAGAAAAGCGGGAGGGTACTTGGGCCGGTATCTCGACTCAAGGACGTGATCGTTGGCGGGC ATCAACGGGTGTCTTTGGTGAAGGGGACTTCGCCGAGCGAGCACTGA
AA sequence Show only first row Show all	>Lus10014767 pacid=23150237 polypeptide=Lus10014767 locus=Lus10014767.g ID=Lus10014767.BGIv1.0 annot-version=v1.0 MSGHFVFPPSQHENLPLEPDYSEIMVDESAGKKVDSGYHVEEGNISGGKDDGTWSLKELNVSEDYPDVQFFESGSNQLTVSGKEFEESEKFPDLHLIDSE ESIYSAAAFSSLHSETSALGGSTVYGETLGTHESVDQGSHLPVDDSLSPEQVTEGGKSEGAEAASMRALNFHVKLGGKEGLYLSFMGLVILGQRWQQERW KVLQLKWQTTLNSEKSGRVLGPVSRLKDVIVGGHQRVSLVKGTSPSEH

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G45980		ATI1	ATG8-interacting protein 1, un...		Lus10014767 [exp]	0	1
AT3G52190		AtPHF1, PHF1	phosphate transporter traffic ...		Lus10017451 [exp]	4.0	0.8304
AT3G48560		TZP5, IMR1, ALS...	TRIAZOLOPYRIMIDINE RESISTANT 5...		Lus10035359 [exp]	4.4	0.8521
AT1G54115		ATCCX4	cation calcium exchanger 4 (.1...		Lus10015668 [exp]	5.5	0.8493
AT5G13810			Glutaredoxin family protein (....		Lus10039537 [exp]	7.5	0.8506
AT4G02340			alpha/beta-Hydrolases superfam...		Lus10009859 [exp]	7.7	0.8447
AT3G61180			RING/U-box superfamily protein...		Lus10029582 [exp]	10.0	0.8452
AT1G80630			RNI-like superfamily protein (...		Lus10024070 [exp]	10.2	0.8013
AT5G06370			NC domain-containing protein-r...		Lus10029402 [exp]	10.4	0.8275
AT1G03350			BSD domain-containing protein ...		Lus10042670 [exp]	13.5	0.8315
AT3G08890			Protein of unknown function, D...		Lus10002862 [exp]	14.1	0.8139

Compare expression of checked genes

Lus10014767 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.